RNA–Protein interactions for RNA: ENST00000583992.1

SNRPCP4-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 4, humanhuman

BASIC

Gene SNRPCP4, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP4-201ENST00000583992 CHRNA2Q15822 529 aa14.1□□□□□ -0.15
SNRPCP4-201ENST00000583992 LRRC37A3O60309 1634 aa14.1□□□□□ -0.15
SNRPCP4-201ENST00000583992 PLEKHG2Q9H7P9 1386 aa14.09□□□□□ -0.15
SNRPCP4-201ENST00000583992 COL22A1Q8NFW1 1626 aaPredicted RBP14.09□□□□□ -0.15
SNRPCP4-201ENST00000583992 PLIN1O60240 522 aa14.09□□□□□ -0.15
SNRPCP4-201ENST00000583992 RARSP54136 660 aaKnown RBP14.09□□□□□ -0.15
SNRPCP4-201ENST00000583992 AMOTQ4VCS5 1084 aa14.09□□□□□ -0.15
SNRPCP4-201ENST00000583992 PLEKHO1Q53GL0 409 aaPredicted RBP14.09□□□□□ -0.15
SNRPCP4-201ENST00000583992 MCM10Q7L590 875 aa14.09□□□□□ -0.15
SNRPCP4-201ENST00000583992 PELP1Q8IZL8 1130 aaKnown RBP14.09□□□□□ -0.15
SNRPCP4-201ENST00000583992 NLRP2Q9NX02 1062 aa14.09□□□□□ -0.15
SNRPCP4-201ENST00000583992 BCAR3O75815 825 aa14.08□□□□□ -0.16
SNRPCP4-201ENST00000583992 ZNF428Q96B54 188 aa14.08□□□□□ -0.16
SNRPCP4-201ENST00000583992 MBIPQ9NS73 344 aa14.08□□□□□ -0.16
SNRPCP4-201ENST00000583992 CRB1P82279 1406 aa14.07□□□□□ -0.16
SNRPCP4-201ENST00000583992 PHLPP1O60346 1717 aa14.07□□□□□ -0.16
SNRPCP4-201ENST00000583992 RAPGEF4Q8WZA2 1011 aa14.07□□□□□ -0.16
SNRPCP4-201ENST00000583992 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
SNRPCP4-201ENST00000583992 COL16A1Q07092 1604 aaPredicted RBP14.06□□□□□ -0.16
SNRPCP4-201ENST00000583992 ZNF530Q6P9A1 599 aaPredicted RBP14.06□□□□□ -0.16
SNRPCP4-201ENST00000583992 CHL1O00533 1208 aa14.05□□□□□ -0.16
SNRPCP4-201ENST00000583992 TATP17735 454 aaPredicted RBP14.05□□□□□ -0.16
SNRPCP4-201ENST00000583992 AKAP4Q5JQC9 854 aa14.05□□□□□ -0.16
SNRPCP4-201ENST00000583992 C1orf141Q5JVX7 400 aa14.05□□□□□ -0.16
SNRPCP4-201ENST00000583992 EXOC6Q8TAG9 804 aa14.05□□□□□ -0.16
SNRPCP4-201ENST00000583992 SMC4Q9NTJ3 1288 aa14.05□□□□□ -0.16
SNRPCP4-201ENST00000583992 WDR17Q8IZU2 1322 aa14.05□□□□□ -0.16
SNRPCP4-201ENST00000583992 OVOS2A0A0G2JMS6 1433 aa14.05□□□□□ -0.16
SNRPCP4-201ENST00000583992 PDE3AQ14432 1141 aa14.04□□□□□ -0.16
SNRPCP4-201ENST00000583992 ALDH1L2Q3SY69 923 aa14.04□□□□□ -0.16
SNRPCP4-201ENST00000583992 CRBNQ96SW2 442 aa14.04□□□□□ -0.16
SNRPCP4-201ENST00000583992 TSPYL4Q9UJ04 414 aa14.04□□□□□ -0.16
SNRPCP4-201ENST00000583992 KIF16BQ96L93 1317 aa14.04□□□□□ -0.16
SNRPCP4-201ENST00000583992 COL14A1Q05707 1796 aaKnown RBP14.04□□□□□ -0.16
SNRPCP4-201ENST00000583992 MS4A1P11836 297 aa14.03□□□□□ -0.16
SNRPCP4-201ENST00000583992 PIP4K2BP78356 416 aa14.03□□□□□ -0.16
SNRPCP4-201ENST00000583992 TWISTNBQ3B726 338 aaPredicted RBP14.03□□□□□ -0.16
SNRPCP4-201ENST00000583992 FRAT1Q92837 279 aaPredicted RBP14.03□□□□□ -0.16
SNRPCP4-201ENST00000583992 BCL2L13Q9BXK5 485 aa14.03□□□□□ -0.16
SNRPCP4-201ENST00000583992 BABAM1Q9NWV8 329 aa14.03□□□□□ -0.16
SNRPCP4-201ENST00000583992 MEGF6O75095 1541 aa14.02□□□□□ -0.16
SNRPCP4-201ENST00000583992 CEMIPQ8WUJ3 1361 aa14.02□□□□□ -0.17
SNRPCP4-201ENST00000583992 UBAP1LF5GYI3 381 aa14.02□□□□□ -0.17
SNRPCP4-201ENST00000583992 C20orf194Q5TEA3 1177 aa14.02□□□□□ -0.17
SNRPCP4-201ENST00000583992 TOM1L2Q6ZVM7 507 aa14.02□□□□□ -0.17
SNRPCP4-201ENST00000583992 SSH1Q8WYL5 1049 aa14.02□□□□□ -0.17
SNRPCP4-201ENST00000583992 CCDC136Q96JN2 1154 aa14.02□□□□□ -0.17
SNRPCP4-201ENST00000583992 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.02□□□□□ -0.17
SNRPCP4-201ENST00000583992 SPG7Q9UQ90 795 aa14.02□□□□□ -0.17
SNRPCP4-201ENST00000583992 PARP4Q9UKK3 1724 aaKnown RBP14.01□□□□□ -0.17
SNRPCP4-201ENST00000583992 ZKSCAN2Q63HK3 967 aa14.01□□□□□ -0.17
SNRPCP4-201ENST00000583992 IL17REQ8NFR9 667 aa14.01□□□□□ -0.17
SNRPCP4-201ENST00000583992 IPO8O15397 1037 aaKnown RBP14□□□□□ -0.17
SNRPCP4-201ENST00000583992 VAMP4O75379 141 aa14□□□□□ -0.17
SNRPCP4-201ENST00000583992 EVA1CP58658 441 aa14□□□□□ -0.17
SNRPCP4-201ENST00000583992 TAF7Q15545 349 aaPredicted RBP14□□□□□ -0.17
SNRPCP4-201ENST00000583992 B4GALNT3Q6L9W6 998 aa14□□□□□ -0.17
SNRPCP4-201ENST00000583992 PKD1L3Q7Z443 1732 aa14□□□□□ -0.17
SNRPCP4-201ENST00000583992 TEFQ10587 303 aa13.99□□□□□ -0.17
SNRPCP4-201ENST00000583992 C8orf58Q8NAV2 365 aa13.99□□□□□ -0.17
SNRPCP4-201ENST00000583992 CARD10Q9BWT7 1032 aa13.99□□□□□ -0.17
SNRPCP4-201ENST00000583992 SOS1Q07889 1333 aaPredicted RBP13.98□□□□□ -0.17
SNRPCP4-201ENST00000583992 ELL2O00472 640 aaPredicted RBP13.98□□□□□ -0.17
SNRPCP4-201ENST00000583992 BRPF1P55201 1214 aaPredicted RBP13.98□□□□□ -0.17
SNRPCP4-201ENST00000583992 FTSJ3Q8IY81 847 aaKnown RBP13.98□□□□□ -0.17
SNRPCP4-201ENST00000583992 TSPYL6Q8N831 410 aa13.98□□□□□ -0.17
SNRPCP4-201ENST00000583992 STRN4Q9NRL3 753 aa13.98□□□□□ -0.17
SNRPCP4-201ENST00000583992 ADAMTS7Q9UKP4 1686 aa13.98□□□□□ -0.17
SNRPCP4-201ENST00000583992 RNMTO43148 476 aaKnown RBP13.97□□□□□ -0.17
SNRPCP4-201ENST00000583992 MPRIPQ6WCQ1 1025 aa13.97□□□□□ -0.17
SNRPCP4-201ENST00000583992 IFNL2Q8IZJ0 200 aa13.97□□□□□ -0.17
SNRPCP4-201ENST00000583992 HSP90AB1P08238 724 aaKnown RBP13.96□□□□□ -0.17
SNRPCP4-201ENST00000583992 PHKG2P15735 406 aa13.96□□□□□ -0.17
SNRPCP4-201ENST00000583992 ATF7IPQ6VMQ6 1270 aa13.96□□□□□ -0.17
SNRPCP4-201ENST00000583992 DZIP1LQ8IYY4 767 aaKnown RBP13.96□□□□□ -0.17
SNRPCP4-201ENST00000583992 MRPL50Q8N5N7 158 aaKnown RBP13.96□□□□□ -0.17
SNRPCP4-201ENST00000583992 PANK1Q8TE04 598 aa13.96□□□□□ -0.17
SNRPCP4-201ENST00000583992 BTG4Q9NY30 223 aa13.96□□□□□ -0.17
SNRPCP4-201ENST00000583992 MIS18AQ9NYP9 233 aa13.96□□□□□ -0.17
SNRPCP4-201ENST00000583992 IL2RBP14784 551 aa13.95□□□□□ -0.18
SNRPCP4-201ENST00000583992 AAMPQ13685 434 aa13.95□□□□□ -0.18
SNRPCP4-201ENST00000583992 LARP1Q6PKG0 1096 aaKnown RBP13.95□□□□□ -0.18
SNRPCP4-201ENST00000583992 CERKQ8TCT0 537 aa13.95□□□□□ -0.18
SNRPCP4-201ENST00000583992 LGR6Q9HBX8 967 aa13.95□□□□□ -0.18
SNRPCP4-201ENST00000583992 NOB1Q9ULX3 412 aaKnown RBP13.95□□□□□ -0.18
SNRPCP4-201ENST00000583992 KDM3BQ7LBC6 1761 aa13.95□□□□□ -0.18
SNRPCP4-201ENST00000583992 PLCH1Q4KWH8 1693 aa13.95□□□□□ -0.18
SNRPCP4-201ENST00000583992 PCDH11XQ9BZA7 1347 aa13.94□□□□□ -0.18
SNRPCP4-201ENST00000583992 PCDH11YQ9BZA8 1340 aa13.94□□□□□ -0.18
SNRPCP4-201ENST00000583992 TRIM27P14373 513 aa13.94□□□□□ -0.18
SNRPCP4-201ENST00000583992 KRT24Q2M2I5 525 aa13.94□□□□□ -0.18
SNRPCP4-201ENST00000583992 ARHGAP45Q92619 1136 aa13.94□□□□□ -0.18
SNRPCP4-201ENST00000583992 COG6Q9Y2V7 657 aa13.94□□□□□ -0.18
SNRPCP4-201ENST00000583992 JCADQ9P266 1359 aa13.94□□□□□ -0.18
SNRPCP4-201ENST00000583992 KDM6AO15550 1401 aaPredicted RBP13.93□□□□□ -0.18
SNRPCP4-201ENST00000583992 VIRMAQ69YN4 1812 aaKnown RBP13.93□□□□□ -0.18
SNRPCP4-201ENST00000583992 BTBD11A6QL63 1104 aa13.93□□□□□ -0.18
SNRPCP4-201ENST00000583992 CLUAP1Q96AJ1 413 aa13.93□□□□□ -0.18
SNRPCP4-201ENST00000583992 CHMP4AQ9BY43 222 aa13.93□□□□□ -0.18
SNRPCP4-201ENST00000583992 API5Q9BZZ5 524 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms