RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 CC2D2BQ6DHV5 1058 aa8.13□□□□□ -1.11
PPP4R1-227ENST00000583988 CCDC125Q86Z20 511 aa8.13□□□□□ -1.11
PPP4R1-227ENST00000583988 RNF217Q8TC41 542 aa8.13□□□□□ -1.11
PPP4R1-227ENST00000583988 CEP126Q9P2H0 1117 aa8.13□□□□□ -1.11
PPP4R1-227ENST00000583988 COG6Q9Y2V7 657 aa8.13□□□□□ -1.11
PPP4R1-227ENST00000583988 MEN1O00255 615 aa8.12□□□□□ -1.11
PPP4R1-227ENST00000583988 FOXD4L5Q5VV16 416 aaPredicted RBP8.11□□□□□ -1.11
PPP4R1-227ENST00000583988 CCDC155Q8N6L0 562 aa8.11□□□□□ -1.11
PPP4R1-227ENST00000583988 A0A1W2PRU2 124 aa8.1□□□□□ -1.11
PPP4R1-227ENST00000583988 RAD21O60216 631 aa8.1□□□□□ -1.11
PPP4R1-227ENST00000583988 POM121Q96HA1 1249 aa8.1□□□□□ -1.11
PPP4R1-227ENST00000583988 VSIG8P0DPA2 414 aa8.09□□□□□ -1.11
PPP4R1-227ENST00000583988 LYSMD3Q7Z3D4 306 aa8.09□□□□□ -1.11
PPP4R1-227ENST00000583988 PRICKLE2Q7Z3G6 844 aa8.09□□□□□ -1.11
PPP4R1-227ENST00000583988 CYP2U1Q7Z449 544 aa8.09□□□□□ -1.11
PPP4R1-227ENST00000583988 C14orf37Q86TY3 774 aa8.09□□□□□ -1.11
PPP4R1-227ENST00000583988 CCDC85AQ96PX6 553 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-227ENST00000583988 CDCA7Q9BWT1 371 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-227ENST00000583988 A6NJR5 290 aa8.08□□□□□ -1.12
PPP4R1-227ENST00000583988 SLFNL1Q499Z3 407 aa8.08□□□□□ -1.12
PPP4R1-227ENST00000583988 CLUAP1Q96AJ1 413 aa8.08□□□□□ -1.12
PPP4R1-227ENST00000583988 NLRP3Q96P20 1036 aa8.08□□□□□ -1.12
PPP4R1-227ENST00000583988 SLC35F4A4IF30 521 aa8.07□□□□□ -1.12
PPP4R1-227ENST00000583988 MYCP01106 439 aaPredicted RBP8.07□□□□□ -1.12
PPP4R1-227ENST00000583988 RNF144AP50876 292 aaPredicted RBP8.07□□□□□ -1.12
PPP4R1-227ENST00000583988 TSGA10IPQ3SY00 556 aa8.07□□□□□ -1.12
PPP4R1-227ENST00000583988 ZMYND15Q9H091 742 aa8.07□□□□□ -1.12
PPP4R1-227ENST00000583988 OSBPL3Q9H4L5 887 aa8.07□□□□□ -1.12
PPP4R1-227ENST00000583988 ARHGEF10LQ9HCE6 1279 aa8.07□□□□□ -1.12
PPP4R1-227ENST00000583988 RAB6BQ9NRW1 208 aa8.07□□□□□ -1.12
PPP4R1-227ENST00000583988 RHOQP17081 205 aa8.06□□□□□ -1.12
PPP4R1-227ENST00000583988 ITGA6P23229 1130 aa8.06□□□□□ -1.12
PPP4R1-227ENST00000583988 WASHC4Q2M389 1173 aa8.06□□□□□ -1.12
PPP4R1-227ENST00000583988 SLC27A3Q5K4L6 730 aa8.06□□□□□ -1.12
PPP4R1-227ENST00000583988 RNF135Q8IUD6 432 aa8.06□□□□□ -1.12
PPP4R1-227ENST00000583988 FNBP4Q8N3X1 1017 aaPredicted RBP8.06□□□□□ -1.12
PPP4R1-227ENST00000583988 STK17AQ9UEE5 414 aa8.06□□□□□ -1.12
PPP4R1-227ENST00000583988 DOLKQ9UPQ8 538 aa8.06□□□□□ -1.12
PPP4R1-227ENST00000583988 SENP3-EIF4A1A0A087X0R7 540 aa8.05□□□□□ -1.12
PPP4R1-227ENST00000583988 CDC14CA4D256 554 aa8.05□□□□□ -1.12
PPP4R1-227ENST00000583988 TRAK2O60296 914 aa8.05□□□□□ -1.12
PPP4R1-227ENST00000583988 SEMA3FQ13275 785 aa8.05□□□□□ -1.12
PPP4R1-227ENST00000583988 ZSCAN1Q8NBB4 408 aa8.05□□□□□ -1.12
PPP4R1-227ENST00000583988 TIMELESSQ9UNS1 1208 aa8.05□□□□□ -1.12
PPP4R1-227ENST00000583988 CLN3Q13286 438 aa8.04□□□□□ -1.12
PPP4R1-227ENST00000583988 OXLD1Q5BKU9 147 aa8.04□□□□□ -1.12
PPP4R1-227ENST00000583988 VWA5B2Q8N398 1253 aa8.04□□□□□ -1.12
PPP4R1-227ENST00000583988 GPR161Q8N6U8 529 aaKnown RBP8.04□□□□□ -1.12
PPP4R1-227ENST00000583988 GPC1P35052 558 aa8.03□□□□□ -1.12
PPP4R1-227ENST00000583988 WWC1Q8IX03 1113 aa8.03□□□□□ -1.12
PPP4R1-227ENST00000583988 PHTF2Q8N3S3 785 aa8.03□□□□□ -1.12
PPP4R1-227ENST00000583988 GNRH1P01148 92 aa8.02□□□□□ -1.13
PPP4R1-227ENST00000583988 POU4F2Q12837 409 aa8.02□□□□□ -1.13
PPP4R1-227ENST00000583988 USP4Q13107 963 aa8.02□□□□□ -1.13
PPP4R1-227ENST00000583988 PROSER2Q86WR7 435 aaPredicted RBP8.02□□□□□ -1.13
PPP4R1-227ENST00000583988 NANOS1Q8WY41 292 aaKnown RBP8.02□□□□□ -1.13
PPP4R1-227ENST00000583988 LORP23490 312 aaPredicted RBP8.01□□□□□ -1.13
PPP4R1-227ENST00000583988 SV2AQ7L0J3 742 aa8.01□□□□□ -1.13
PPP4R1-227ENST00000583988 CNKSR1Q969H4 720 aa8.01□□□□□ -1.13
PPP4R1-227ENST00000583988 CNTNAP3BQ96NU0 1288 aa8.01□□□□□ -1.13
PPP4R1-227ENST00000583988 COL25A1Q9BXS0 654 aaPredicted RBP8.01□□□□□ -1.13
PPP4R1-227ENST00000583988 CNTNAP3Q9BZ76 1288 aa8.01□□□□□ -1.13
PPP4R1-227ENST00000583988 FAM181BA6NEQ2 426 aa8□□□□□ -1.13
PPP4R1-227ENST00000583988 STAU1O95793 577 aaKnown RBP8□□□□□ -1.13
PPP4R1-227ENST00000583988 IL2RAP01589 272 aa8□□□□□ -1.13
PPP4R1-227ENST00000583988 RIPOR1Q6ZS17 1223 aa8□□□□□ -1.13
PPP4R1-227ENST00000583988 ESYT1Q9BSJ8 1104 aa8□□□□□ -1.13
PPP4R1-227ENST00000583988 GRIP2Q9C0E4 1043 aa8□□□□□ -1.13
PPP4R1-227ENST00000583988 CUEDC1Q9NWM3 386 aaPredicted RBP8□□□□□ -1.13
PPP4R1-227ENST00000583988 SOX11P35716 441 aa7.99□□□□□ -1.13
PPP4R1-227ENST00000583988 KRT76Q01546 638 aa7.99□□□□□ -1.13
PPP4R1-227ENST00000583988 CENPCQ03188 943 aa7.99□□□□□ -1.13
PPP4R1-227ENST00000583988 PLPP7Q8NBV4 271 aa7.99□□□□□ -1.13
PPP4R1-227ENST00000583988 GAS2L1Q99501 681 aaPredicted RBP7.99□□□□□ -1.13
PPP4R1-227ENST00000583988 RNFT1Q5M7Z0 435 aa7.98□□□□□ -1.13
PPP4R1-227ENST00000583988 NBPF10Q6P3W6 841 aaKnown RBP7.98□□□□□ -1.13
PPP4R1-227ENST00000583988 NBPF15Q8N660 670 aa7.98□□□□□ -1.13
PPP4R1-227ENST00000583988 SIRT1Q96EB6 747 aa7.98□□□□□ -1.13
PPP4R1-227ENST00000583988 PIK3CDO00329 1044 aa7.97□□□□□ -1.13
PPP4R1-227ENST00000583988 MAP7D1Q3KQU3 841 aa7.97□□□□□ -1.13
PPP4R1-227ENST00000583988 ESCO1Q5FWF5 840 aa7.97□□□□□ -1.13
PPP4R1-227ENST00000583988 TAS1R3Q7RTX0 852 aa7.97□□□□□ -1.13
PPP4R1-227ENST00000583988 ALG2Q9H553 416 aa7.97□□□□□ -1.13
PPP4R1-227ENST00000583988 TIMMDC1Q9NPL8 285 aa7.97□□□□□ -1.13
PPP4R1-227ENST00000583988 CHIC2Q9UKJ5 165 aa7.97□□□□□ -1.13
PPP4R1-227ENST00000583988 DYRK1BQ9Y463 629 aa7.97□□□□□ -1.13
PPP4R1-227ENST00000583988 WASLO00401 505 aaPredicted RBP7.96□□□□□ -1.14
PPP4R1-227ENST00000583988 PHKA2P46019 1235 aa7.96□□□□□ -1.14
PPP4R1-227ENST00000583988 TMEM214Q6NUQ4 689 aaKnown RBP7.96□□□□□ -1.14
PPP4R1-227ENST00000583988 XAGE2Q96GT9 111 aa7.96□□□□□ -1.14
PPP4R1-227ENST00000583988 ZSCAN10Q96SZ4 725 aaPredicted RBP7.96□□□□□ -1.14
PPP4R1-227ENST00000583988 ETNK1Q9HBU6 452 aa7.96□□□□□ -1.14
PPP4R1-227ENST00000583988 POM121CA8CG34 1229 aa7.95□□□□□ -1.14
PPP4R1-227ENST00000583988 SPATA31C2B4DYI2 1134 aa7.95□□□□□ -1.14
PPP4R1-227ENST00000583988 GTF2E1P29083 439 aaPredicted RBP7.95□□□□□ -1.14
PPP4R1-227ENST00000583988 GPR25O00155 361 aa7.94□□□□□ -1.14
PPP4R1-227ENST00000583988 SKIP12755 728 aa7.94□□□□□ -1.14
PPP4R1-227ENST00000583988 DBN1Q16643 649 aa7.94□□□□□ -1.14
PPP4R1-227ENST00000583988 TRIM22Q8IYM9 498 aa7.94□□□□□ -1.14
PPP4R1-227ENST00000583988 ZNF837Q96EG3 531 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms