RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 MAP10Q9P2G4 905 aa9.13□□□□□ -0.95
PRKCA-205ENST00000583775 CCDC18Q5T9S5 1454 aa9.13□□□□□ -0.95
PRKCA-205ENST00000583775 TTBK1Q5TCY1 1321 aaPredicted RBP9.12□□□□□ -0.95
PRKCA-205ENST00000583775 CLK2P49760 499 aaKnown RBP9.12□□□□□ -0.95
PRKCA-205ENST00000583775 RASSF7Q02833 373 aa9.12□□□□□ -0.95
PRKCA-205ENST00000583775 RSBN1LQ6PCB5 846 aaPredicted RBP9.12□□□□□ -0.95
PRKCA-205ENST00000583775 LINC00528Q8N1L1 170 aa9.12□□□□□ -0.95
PRKCA-205ENST00000583775 C1QTNF2Q9BXJ5 285 aa9.12□□□□□ -0.95
PRKCA-205ENST00000583775 SYNJ2O15056 1496 aa9.12□□□□□ -0.95
PRKCA-205ENST00000583775 CTHP32929 405 aa9.11□□□□□ -0.95
PRKCA-205ENST00000583775 QPCTQ16769 361 aa9.11□□□□□ -0.95
PRKCA-205ENST00000583775 CABLES1Q8TDN4 633 aa9.11□□□□□ -0.95
PRKCA-205ENST00000583775 ADAMTS8Q9UP79 889 aa9.11□□□□□ -0.95
PRKCA-205ENST00000583775 HECW1Q76N89 1606 aa9.11□□□□□ -0.95
PRKCA-205ENST00000583775 SPTLC1O15269 473 aa9.1□□□□□ -0.95
PRKCA-205ENST00000583775 ARID5BQ14865 1188 aa9.1□□□□□ -0.95
PRKCA-205ENST00000583775 SH3RF1Q7Z6J0 888 aa9.1□□□□□ -0.95
PRKCA-205ENST00000583775 TMEM151AQ8N4L1 468 aa9.1□□□□□ -0.95
PRKCA-205ENST00000583775 ARHGEF11O15085 1522 aa9.1□□□□□ -0.95
PRKCA-205ENST00000583775 EHBP1L1Q8N3D4 1523 aa9.1□□□□□ -0.95
PRKCA-205ENST00000583775 KIAA0556O60303 1618 aa9.09□□□□□ -0.95
PRKCA-205ENST00000583775 SUPT6HQ7KZ85 1726 aaKnown RBP9.09□□□□□ -0.95
PRKCA-205ENST00000583775 NUP160Q12769 1436 aa9.09□□□□□ -0.95
PRKCA-205ENST00000583775 BMP2P12643 396 aa9.09□□□□□ -0.95
PRKCA-205ENST00000583775 NANOS1Q8WY41 292 aaKnown RBP9.09□□□□□ -0.95
PRKCA-205ENST00000583775 PHLDB1Q86UU1 1377 aa9.09□□□□□ -0.95
PRKCA-205ENST00000583775 NUTM2BA6NNL0 878 aaPredicted RBP9.08□□□□□ -0.96
PRKCA-205ENST00000583775 NUTM2EB1AL46 878 aaPredicted RBP9.08□□□□□ -0.96
PRKCA-205ENST00000583775 GDF11O95390 407 aa9.08□□□□□ -0.96
PRKCA-205ENST00000583775 DIXDC1Q155Q3 683 aa9.08□□□□□ -0.96
PRKCA-205ENST00000583775 RTL5Q5HYW3 569 aaPredicted RBP9.08□□□□□ -0.96
PRKCA-205ENST00000583775 NUTM2DQ5VT03 806 aaPredicted RBP9.08□□□□□ -0.96
PRKCA-205ENST00000583775 BPHLQ86WA6 291 aaPredicted RBP9.08□□□□□ -0.96
PRKCA-205ENST00000583775 NUTM2AQ8IVF1 878 aaPredicted RBP9.08□□□□□ -0.96
PRKCA-205ENST00000583775 MAP4K5Q9Y4K4 846 aa9.08□□□□□ -0.96
PRKCA-205ENST00000583775 DISP1Q96F81 1524 aa9.08□□□□□ -0.96
PRKCA-205ENST00000583775 PER1O15534 1290 aaPredicted RBP9.07□□□□□ -0.96
PRKCA-205ENST00000583775 CEP170Q5SW79 1584 aa9.07□□□□□ -0.96
PRKCA-205ENST00000583775 PRPF38BQ5VTL8 546 aaKnown RBP9.06□□□□□ -0.96
PRKCA-205ENST00000583775 TRMT44Q8IYL2 757 aaKnown RBP9.06□□□□□ -0.96
PRKCA-205ENST00000583775 TSC1Q92574 1164 aa9.06□□□□□ -0.96
PRKCA-205ENST00000583775 CNTNAP3BQ96NU0 1288 aa9.06□□□□□ -0.96
PRKCA-205ENST00000583775 CNTNAP3Q9BZ76 1288 aa9.06□□□□□ -0.96
PRKCA-205ENST00000583775 GOPCQ9HD26 462 aa9.06□□□□□ -0.96
PRKCA-205ENST00000583775 EPRSP07814 1512 aaKnown RBP9.05□□□□□ -0.96
PRKCA-205ENST00000583775 PTSQ03393 145 aa9.05□□□□□ -0.96
PRKCA-205ENST00000583775 ZNF385CQ66K41 422 aaPredicted RBP9.05□□□□□ -0.96
PRKCA-205ENST00000583775 TSEN34Q9BSV6 310 aaKnown RBP9.05□□□□□ -0.96
PRKCA-205ENST00000583775 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.05□□□□□ -0.96
PRKCA-205ENST00000583775 FGD6Q6ZV73 1430 aa9.05□□□□□ -0.96
PRKCA-205ENST00000583775 MTUS2Q5JR59 1369 aa9.04□□□□□ -0.96
PRKCA-205ENST00000583775 DHX57Q6P158 1386 aaKnown RBP9.04□□□□□ -0.96
PRKCA-205ENST00000583775 ARHGEF15O94989 841 aa9.04□□□□□ -0.96
PRKCA-205ENST00000583775 UPP2O95045 317 aa9.04□□□□□ -0.96
PRKCA-205ENST00000583775 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.04□□□□□ -0.96
PRKCA-205ENST00000583775 RNFT1Q5M7Z0 435 aa9.04□□□□□ -0.96
PRKCA-205ENST00000583775 SH3BP5LQ7L8J4 393 aa9.04□□□□□ -0.96
PRKCA-205ENST00000583775 ZBTB3Q9H5J0 574 aa9.04□□□□□ -0.96
PRKCA-205ENST00000583775 MYOM3Q5VTT5 1437 aa9.04□□□□□ -0.96
PRKCA-205ENST00000583775 NCOA2Q15596 1464 aa9.03□□□□□ -0.96
PRKCA-205ENST00000583775 RAPGEF6Q8TEU7 1601 aa9.03□□□□□ -0.96
PRKCA-205ENST00000583775 SLURP2P0DP57 97 aa9.03□□□□□ -0.96
PRKCA-205ENST00000583775 COL25A1Q9BXS0 654 aaPredicted RBP9.03□□□□□ -0.96
PRKCA-205ENST00000583775 SETD5Q9C0A6 1442 aa9.03□□□□□ -0.96
PRKCA-205ENST00000583775 TCOF1Q13428 1488 aaKnown RBP9.02□□□□□ -0.96
PRKCA-205ENST00000583775 MAGI3Q5TCQ9 1506 aa9.02□□□□□ -0.97
PRKCA-205ENST00000583775 TTLL8A6PVC2 850 aa9.02□□□□□ -0.97
PRKCA-205ENST00000583775 LILRB3O75022 631 aa9.02□□□□□ -0.97
PRKCA-205ENST00000583775 RNF225M0QZC1 329 aaPredicted RBP9.01□□□□□ -0.97
PRKCA-205ENST00000583775 FSHRP23945 695 aa9.01□□□□□ -0.97
PRKCA-205ENST00000583775 RFC5P40937 340 aa9.01□□□□□ -0.97
PRKCA-205ENST00000583775 CARMIL2Q6F5E8 1435 aa9.01□□□□□ -0.97
PRKCA-205ENST00000583775 Q6ZVU0 165 aa9.01□□□□□ -0.97
PRKCA-205ENST00000583775 CHMP7Q8WUX9 453 aaPredicted RBP9.01□□□□□ -0.97
PRKCA-205ENST00000583775 MIA2Q96PC5 1412 aa9.01□□□□□ -0.97
PRKCA-205ENST00000583775 EMILIN1Q9Y6C2 1016 aa9.01□□□□□ -0.97
PRKCA-205ENST00000583775 SLC35F4A4IF30 521 aa9□□□□□ -0.97
PRKCA-205ENST00000583775 AP1G2O75843 785 aa9□□□□□ -0.97
PRKCA-205ENST00000583775 AGERQ15109 404 aa9□□□□□ -0.97
PRKCA-205ENST00000583775 WHAMMQ8TF30 809 aa9□□□□□ -0.97
PRKCA-205ENST00000583775 PTPN23Q9H3S7 1636 aa9□□□□□ -0.97
PRKCA-205ENST00000583775 NUP153P49790 1475 aaKnown RBP9□□□□□ -0.97
PRKCA-205ENST00000583775 AKNAQ7Z591 1439 aa8.99□□□□□ -0.97
PRKCA-205ENST00000583775 ADCY10Q96PN6 1610 aa8.99□□□□□ -0.97
PRKCA-205ENST00000583775 SPINT1O43278 529 aa8.99□□□□□ -0.97
PRKCA-205ENST00000583775 TUSC1Q2TAM9 212 aa8.99□□□□□ -0.97
PRKCA-205ENST00000583775 CCDC116Q8IYX3 515 aa8.99□□□□□ -0.97
PRKCA-205ENST00000583775 CCDC155Q8N6L0 562 aa8.99□□□□□ -0.97
PRKCA-205ENST00000583775 RAB3GAP2Q9H2M9 1393 aa8.99□□□□□ -0.97
PRKCA-205ENST00000583775 VASH1Q7L8A9 365 aaPredicted RBP8.98□□□□□ -0.97
PRKCA-205ENST00000583775 ARMC2Q8NEN0 867 aa8.98□□□□□ -0.97
PRKCA-205ENST00000583775 DNMT3AQ9Y6K1 912 aaPredicted RBP8.98□□□□□ -0.97
PRKCA-205ENST00000583775 ACIN1Q9UKV3 1341 aaKnown RBP8.98□□□□□ -0.97
PRKCA-205ENST00000583775 SHROOM2Q13796 1616 aa8.98□□□□□ -0.97
PRKCA-205ENST00000583775 HFM1A2PYH4 1435 aa8.97□□□□□ -0.97
PRKCA-205ENST00000583775 CTDSPL2Q05D32 466 aa8.97□□□□□ -0.97
PRKCA-205ENST00000583775 SNRKQ9NRH2 765 aa8.97□□□□□ -0.97
PRKCA-205ENST00000583775 ABCA8O94911 1581 aa8.97□□□□□ -0.97
PRKCA-205ENST00000583775 CHD1O14646 1710 aa8.97□□□□□ -0.97
PRKCA-205ENST00000583775 CDK13Q14004 1512 aaKnown RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms