RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 ATP10AO60312 1499 aa12.76□□□□□ -0.37
RNF43-207ENST00000583753 FOXO3O43524 673 aa12.76□□□□□ -0.37
RNF43-207ENST00000583753 GADD45BO75293 160 aaPredicted RBP12.76□□□□□ -0.37
RNF43-207ENST00000583753 GIMAP6Q6P9H5 292 aa12.76□□□□□ -0.37
RNF43-207ENST00000583753 DCTPP1Q9H773 170 aa12.76□□□□□ -0.37
RNF43-207ENST00000583753 PPFIA3O75145 1194 aa12.76□□□□□ -0.37
RNF43-207ENST00000583753 G2E3Q7L622 706 aa12.76□□□□□ -0.37
RNF43-207ENST00000583753 CCDC83Q8IWF9 413 aa12.76□□□□□ -0.37
RNF43-207ENST00000583753 CNPY2Q9Y2B0 182 aa12.76□□□□□ -0.37
RNF43-207ENST00000583753 ADGRL1O94910 1474 aa12.75□□□□□ -0.37
RNF43-207ENST00000583753 ADCY10Q96PN6 1610 aa12.75□□□□□ -0.37
RNF43-207ENST00000583753 PPIP5K1Q6PFW1 1433 aa12.75□□□□□ -0.37
RNF43-207ENST00000583753 ADCY5O95622 1261 aa12.75□□□□□ -0.37
RNF43-207ENST00000583753 MX1P20591 662 aa12.75□□□□□ -0.37
RNF43-207ENST00000583753 CEP85Q6P2H3 762 aa12.75□□□□□ -0.37
RNF43-207ENST00000583753 USP48Q86UV5 1035 aa12.75□□□□□ -0.37
RNF43-207ENST00000583753 BICD2Q8TD16 824 aa12.75□□□□□ -0.37
RNF43-207ENST00000583753 KIF2CQ99661 725 aa12.75□□□□□ -0.37
RNF43-207ENST00000583753 TCEANC2Q96MN5 208 aa12.75□□□□□ -0.37
RNF43-207ENST00000583753 LRRFIP2Q9Y608 721 aaKnown RBP12.75□□□□□ -0.37
RNF43-207ENST00000583753 IL16Q14005 1332 aa12.75□□□□□ -0.37
RNF43-207ENST00000583753 MAST1Q9Y2H9 1570 aa12.74□□□□□ -0.37
RNF43-207ENST00000583753 PDE1AP54750 535 aa12.74□□□□□ -0.37
RNF43-207ENST00000583753 ANKRD44Q8N8A2 993 aa12.74□□□□□ -0.37
RNF43-207ENST00000583753 HSP90AB2PQ58FF8 381 aa12.74□□□□□ -0.37
RNF43-207ENST00000583753 ZNF771Q7L3S4 317 aaPredicted RBP12.74□□□□□ -0.37
RNF43-207ENST00000583753 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.74□□□□□ -0.37
RNF43-207ENST00000583753 ANXA1P04083 346 aa12.74□□□□□ -0.37
RNF43-207ENST00000583753 SASS6Q6UVJ0 657 aa12.74□□□□□ -0.37
RNF43-207ENST00000583753 CKAP2LQ8IYA6 745 aa12.74□□□□□ -0.37
RNF43-207ENST00000583753 FANCAO15360 1455 aa12.73□□□□□ -0.37
RNF43-207ENST00000583753 AIMP1Q12904 312 aaKnown RBP12.73□□□□□ -0.37
RNF43-207ENST00000583753 NUDT16Q96DE0 195 aaKnown RBP12.73□□□□□ -0.37
RNF43-207ENST00000583753 TRIM5Q9C035 493 aa12.73□□□□□ -0.37
RNF43-207ENST00000583753 WDR33Q9C0J8 1336 aaKnown RBP12.73□□□□□ -0.37
RNF43-207ENST00000583753 GOLGA6L6A8MZA4 724 aa12.73□□□□□ -0.37
RNF43-207ENST00000583753 MAPK8IP2Q13387 824 aaPredicted RBP12.73□□□□□ -0.37
RNF43-207ENST00000583753 MAP7D2Q96T17 732 aa12.73□□□□□ -0.37
RNF43-207ENST00000583753 PALD1Q9ULE6 856 aa12.73□□□□□ -0.37
RNF43-207ENST00000583753 CASTP20810 708 aaKnown RBP12.73□□□□□ -0.37
RNF43-207ENST00000583753 C9orf78Q9NZ63 289 aaPredicted RBP12.73□□□□□ -0.37
RNF43-207ENST00000583753 SRGAP3O43295 1099 aa12.72□□□□□ -0.37
RNF43-207ENST00000583753 TFIP11Q9UBB9 837 aaKnown RBP12.72□□□□□ -0.37
RNF43-207ENST00000583753 SYNMO15061 1565 aa12.72□□□□□ -0.37
RNF43-207ENST00000583753 RTEL1-TNFRSF6BF6WH68 1400 aa12.72□□□□□ -0.37
RNF43-207ENST00000583753 JAKMIP1Q96N16 626 aaKnown RBP12.72□□□□□ -0.37
RNF43-207ENST00000583753 PHF23Q9BUL5 403 aaPredicted RBP12.71□□□□□ -0.37
RNF43-207ENST00000583753 NOL7Q9UMY1 257 aaKnown RBP12.71□□□□□ -0.37
RNF43-207ENST00000583753 ATP6V1DQ9Y5K8 247 aa12.71□□□□□ -0.37
RNF43-207ENST00000583753 IFIT2P09913 472 aaKnown RBP12.71□□□□□ -0.37
RNF43-207ENST00000583753 NECAB1Q8N987 351 aa12.71□□□□□ -0.37
RNF43-207ENST00000583753 SIL1Q9H173 461 aa12.71□□□□□ -0.37
RNF43-207ENST00000583753 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.71□□□□□ -0.38
RNF43-207ENST00000583753 KDM4AO75164 1064 aa12.71□□□□□ -0.38
RNF43-207ENST00000583753 USHBP1Q8N6Y0 703 aa12.71□□□□□ -0.38
RNF43-207ENST00000583753 RPGRIP1LQ68CZ1 1315 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 H3BQV1 296 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 GNAI3P08754 354 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 MCM2P49736 904 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 IFFO2Q5TF58 517 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 ARHGAP45Q92619 1136 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 PPP1R9BQ96SB3 815 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 ZNF518AQ6AHZ1 1483 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 TTC37Q6PGP7 1564 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 ZNF445P59923 1031 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 HDGFL1Q5TGJ6 251 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 PRPF40BQ6NWY9 871 aaKnown RBP12.7□□□□□ -0.38
RNF43-207ENST00000583753 FAM173BQ6P4H8 233 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 ESYT1Q9BSJ8 1104 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 KDM5AP29375 1690 aaKnown RBP12.7□□□□□ -0.38
RNF43-207ENST00000583753 ZKSCAN1P17029 563 aaPredicted RBP12.7□□□□□ -0.38
RNF43-207ENST00000583753 DNAJC5Q9H3Z4 198 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 KIF3AQ9Y496 699 aa12.7□□□□□ -0.38
RNF43-207ENST00000583753 ARHGEF5Q12774 1597 aa12.69□□□□□ -0.38
RNF43-207ENST00000583753 CD109Q6YHK3 1445 aa12.69□□□□□ -0.38
RNF43-207ENST00000583753 BECN2A8MW95 431 aa12.69□□□□□ -0.38
RNF43-207ENST00000583753 CCT4P50991 539 aaKnown RBP12.69□□□□□ -0.38
RNF43-207ENST00000583753 NOLC1Q14978 699 aaKnown RBP eCLIP12.69□□□□□ -0.38
RNF43-207ENST00000583753 C16orf45Q96MC5 204 aaPredicted RBP12.69□□□□□ -0.38
RNF43-207ENST00000583753 MSH6P52701 1360 aa12.69□□□□□ -0.38
RNF43-207ENST00000583753 ABCA8O94911 1581 aa12.69□□□□□ -0.38
RNF43-207ENST00000583753 GOLGA6L19H0YKK7 550 aa12.69□□□□□ -0.38
RNF43-207ENST00000583753 NLRP6P59044 892 aa12.69□□□□□ -0.38
RNF43-207ENST00000583753 LARP1BQ659C4 914 aaKnown RBP12.69□□□□□ -0.38
RNF43-207ENST00000583753 FMNL2Q96PY5 1086 aa12.69□□□□□ -0.38
RNF43-207ENST00000583753 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.69□□□□□ -0.38
RNF43-207ENST00000583753 NLRP1Q9C000 1473 aa12.68□□□□□ -0.38
RNF43-207ENST00000583753 SLC26A8Q96RN1 970 aa12.68□□□□□ -0.38
RNF43-207ENST00000583753 CDK11BP21127 795 aaKnown RBP12.68□□□□□ -0.38
RNF43-207ENST00000583753 NSD2O96028 1365 aa12.68□□□□□ -0.38
RNF43-207ENST00000583753 DNM1Q05193 864 aaKnown RBP12.68□□□□□ -0.38
RNF43-207ENST00000583753 TPD52L1Q16890 204 aaPredicted RBP12.68□□□□□ -0.38
RNF43-207ENST00000583753 CCDC30Q5VVM6 783 aa12.68□□□□□ -0.38
RNF43-207ENST00000583753 CNTROBQ8N137 903 aa12.68□□□□□ -0.38
RNF43-207ENST00000583753 DDX11Q96FC9 970 aa12.68□□□□□ -0.38
RNF43-207ENST00000583753 ZNF330Q9Y3S2 320 aaPredicted RBP12.68□□□□□ -0.38
RNF43-207ENST00000583753 AK9Q5TCS8 1911 aa12.67□□□□□ -0.38
RNF43-207ENST00000583753 CROCC2H7BZ55 1655 aa12.67□□□□□ -0.38
RNF43-207ENST00000583753 CYB5RLQ6IPT4 315 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms