RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 WDR63Q8IWG1 891 aa23.79■■□□□ 1.4
NDEL1-217ENST00000583683 AMOTQ4VCS5 1084 aa23.78■■□□□ 1.4
NDEL1-217ENST00000583683 PLEKHO1Q53GL0 409 aaPredicted RBP23.78■■□□□ 1.4
NDEL1-217ENST00000583683 FNBP4Q8N3X1 1017 aaPredicted RBP23.78■■□□□ 1.4
NDEL1-217ENST00000583683 FBXO41Q8TF61 875 aa23.78■■□□□ 1.4
NDEL1-217ENST00000583683 PKD1L3Q7Z443 1732 aa23.78■■□□□ 1.4
NDEL1-217ENST00000583683 BCL9LQ86UU0 1499 aa23.78■■□□□ 1.4
NDEL1-217ENST00000583683 TATP17735 454 aaPredicted RBP23.77■■□□□ 1.4
NDEL1-217ENST00000583683 LMOD3Q0VAK6 560 aa23.77■■□□□ 1.4
NDEL1-217ENST00000583683 SPINK5Q9NQ38 1064 aaPredicted RBP23.77■■□□□ 1.4
NDEL1-217ENST00000583683 USP35Q9P2H5 1018 aa23.77■■□□□ 1.4
NDEL1-217ENST00000583683 OVOS2A0A0G2JMS6 1433 aa23.76■■□□□ 1.39
NDEL1-217ENST00000583683 UNC5CLQ8IV45 518 aa23.75■■□□□ 1.39
NDEL1-217ENST00000583683 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.75■■□□□ 1.39
NDEL1-217ENST00000583683 SLFN5Q08AF3 891 aa23.75■■□□□ 1.39
NDEL1-217ENST00000583683 MEX3CQ5U5Q3 659 aaKnown RBP23.75■■□□□ 1.39
NDEL1-217ENST00000583683 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.75■■□□□ 1.39
NDEL1-217ENST00000583683 WNK3Q9BYP7 1800 aa23.75■■□□□ 1.39
NDEL1-217ENST00000583683 MAP3K5Q99683 1374 aa23.74■■□□□ 1.39
NDEL1-217ENST00000583683 IL2RBP14784 551 aa23.74■■□□□ 1.39
NDEL1-217ENST00000583683 DCTN1Q14203 1278 aa23.74■■□□□ 1.39
NDEL1-217ENST00000583683 THUMPD2Q9BTF0 503 aaKnown RBP23.74■■□□□ 1.39
NDEL1-217ENST00000583683 GNAT3A8MTJ3 354 aa23.73■■□□□ 1.39
NDEL1-217ENST00000583683 ZNF530Q6P9A1 599 aaPredicted RBP23.73■■□□□ 1.39
NDEL1-217ENST00000583683 E9PSI1 815 aa23.73■■□□□ 1.39
NDEL1-217ENST00000583683 TRMT2AQ8IZ69 625 aaKnown RBP23.73■■□□□ 1.39
NDEL1-217ENST00000583683 SPATA31A1Q5TZJ5 1347 aa23.72■■□□□ 1.39
NDEL1-217ENST00000583683 VIRMAQ69YN4 1812 aaKnown RBP23.72■■□□□ 1.39
NDEL1-217ENST00000583683 HTATSF1O43719 755 aaKnown RBP23.72■■□□□ 1.39
NDEL1-217ENST00000583683 MCM10Q7L590 875 aa23.72■■□□□ 1.39
NDEL1-217ENST00000583683 AKAP4Q5JQC9 854 aa23.71■■□□□ 1.39
NDEL1-217ENST00000583683 DUSP27Q5VZP5 1158 aa23.71■■□□□ 1.39
NDEL1-217ENST00000583683 SPG7Q9UQ90 795 aa23.71■■□□□ 1.39
NDEL1-217ENST00000583683 IL16Q14005 1332 aa23.71■■□□□ 1.39
NDEL1-217ENST00000583683 SPATA31A5Q5VU36 1347 aa23.71■■□□□ 1.39
NDEL1-217ENST00000583683 SPATA31A7Q8IWB4 1347 aa23.71■■□□□ 1.39
NDEL1-217ENST00000583683 DISP2A7MBM2 1401 aa23.71■■□□□ 1.39
NDEL1-217ENST00000583683 SHANK3Q9BYB0 1731 aa23.71■■□□□ 1.39
NDEL1-217ENST00000583683 RTF1Q92541 710 aaKnown RBP23.7■■□□□ 1.39
NDEL1-217ENST00000583683 USP21Q9UK80 565 aa23.7■■□□□ 1.38
NDEL1-217ENST00000583683 LRRC37A3O60309 1634 aa23.7■■□□□ 1.38
NDEL1-217ENST00000583683 CALD1Q05682 793 aaKnown RBP23.69■■□□□ 1.38
NDEL1-217ENST00000583683 VPS72Q15906 364 aa23.68■■□□□ 1.38
NDEL1-217ENST00000583683 C1orf141Q5JVX7 400 aa23.68■■□□□ 1.38
NDEL1-217ENST00000583683 THRAP3Q9Y2W1 955 aaKnown RBP23.68■■□□□ 1.38
NDEL1-217ENST00000583683 GTF3C3Q9Y5Q9 886 aa23.68■■□□□ 1.38
NDEL1-217ENST00000583683 AFF2P51816 1311 aa23.68■■□□□ 1.38
NDEL1-217ENST00000583683 IL17REQ8NFR9 667 aa23.68■■□□□ 1.38
NDEL1-217ENST00000583683 ZCRB1Q8TBF4 217 aaKnown RBP23.68■■□□□ 1.38
NDEL1-217ENST00000583683 ADAMTS7Q9UKP4 1686 aa23.67■■□□□ 1.38
NDEL1-217ENST00000583683 CCDC9Q9Y3X0 531 aaKnown RBP23.66■■□□□ 1.38
NDEL1-217ENST00000583683 CYP27B1O15528 508 aa23.66■■□□□ 1.38
NDEL1-217ENST00000583683 PHKG2P15735 406 aa23.66■■□□□ 1.38
NDEL1-217ENST00000583683 CEMIPQ8WUJ3 1361 aa23.65■■□□□ 1.38
NDEL1-217ENST00000583683 IFNL2Q8IZJ0 200 aa23.65■■□□□ 1.38
NDEL1-217ENST00000583683 MYH16Q9H6N6 1097 aa23.65■■□□□ 1.38
NDEL1-217ENST00000583683 SCN11AQ9UI33 1791 aa23.65■■□□□ 1.38
NDEL1-217ENST00000583683 ZNF853P0CG23 659 aa23.64■■□□□ 1.38
NDEL1-217ENST00000583683 MPRIPQ6WCQ1 1025 aa23.64■■□□□ 1.38
NDEL1-217ENST00000583683 LGR6Q9HBX8 967 aa23.64■■□□□ 1.38
NDEL1-217ENST00000583683 IFT57Q9NWB7 429 aa23.64■■□□□ 1.38
NDEL1-217ENST00000583683 PCDH11XQ9BZA7 1347 aa23.64■■□□□ 1.37
NDEL1-217ENST00000583683 PCDH11YQ9BZA8 1340 aa23.64■■□□□ 1.37
NDEL1-217ENST00000583683 BARGINQ6ZT62 677 aa23.63■■□□□ 1.37
NDEL1-217ENST00000583683 CFAP44Q96MT7 982 aa23.63■■□□□ 1.37
NDEL1-217ENST00000583683 FANCIQ9NVI1 1328 aa23.63■■□□□ 1.37
NDEL1-217ENST00000583683 TSR2Q969E8 191 aaKnown RBP23.63■■□□□ 1.37
NDEL1-217ENST00000583683 CDCA7Q9BWT1 371 aaPredicted RBP23.63■■□□□ 1.37
NDEL1-217ENST00000583683 GNAI1P63096 354 aa23.62■■□□□ 1.37
NDEL1-217ENST00000583683 LAS1LQ9Y4W2 734 aaKnown RBP23.62■■□□□ 1.37
NDEL1-217ENST00000583683 KDM6AO15550 1401 aaPredicted RBP23.61■■□□□ 1.37
NDEL1-217ENST00000583683 RNMTO43148 476 aaKnown RBP23.61■■□□□ 1.37
NDEL1-217ENST00000583683 SIPA1L3O60292 1781 aaPredicted RBP23.59■■□□□ 1.37
NDEL1-217ENST00000583683 ATRNO75882 1429 aa23.59■■□□□ 1.37
NDEL1-217ENST00000583683 TNS2Q63HR2 1409 aa23.59■■□□□ 1.37
NDEL1-217ENST00000583683 CHL1O00533 1208 aa23.59■■□□□ 1.37
NDEL1-217ENST00000583683 DDX54Q8TDD1 881 aaKnown RBP23.59■■□□□ 1.37
NDEL1-217ENST00000583683 MBIPQ9NS73 344 aa23.59■■□□□ 1.37
NDEL1-217ENST00000583683 GLI3P10071 1580 aa23.58■■□□□ 1.37
NDEL1-217ENST00000583683 HSP90AB1P08238 724 aaKnown RBP23.58■■□□□ 1.37
NDEL1-217ENST00000583683 DCAF5Q96JK2 942 aa23.58■■□□□ 1.37
NDEL1-217ENST00000583683 EXOC5O00471 708 aa23.57■■□□□ 1.36
NDEL1-217ENST00000583683 NKX1-1Q15270 411 aaPredicted RBP23.56■■□□□ 1.36
NDEL1-217ENST00000583683 FAM98CQ17RN3 349 aaKnown RBP23.56■■□□□ 1.36
NDEL1-217ENST00000583683 TRPC5Q9UL62 973 aaPredicted RBP23.56■■□□□ 1.36
NDEL1-217ENST00000583683 TAF7Q15545 349 aaPredicted RBP23.56■■□□□ 1.36
NDEL1-217ENST00000583683 GJD4Q96KN9 370 aaPredicted RBP23.56■■□□□ 1.36
NDEL1-217ENST00000583683 MIS18AQ9NYP9 233 aa23.55■■□□□ 1.36
NDEL1-217ENST00000583683 TEFQ10587 303 aa23.54■■□□□ 1.36
NDEL1-217ENST00000583683 DDB1Q16531 1140 aa23.54■■□□□ 1.36
NDEL1-217ENST00000583683 THSD7AQ9UPZ6 1657 aa23.54■■□□□ 1.36
NDEL1-217ENST00000583683 MRC1P22897 1456 aa23.54■■□□□ 1.36
NDEL1-217ENST00000583683 EXOSC9Q06265 439 aaKnown RBP23.54■■□□□ 1.36
NDEL1-217ENST00000583683 KDM3BQ7LBC6 1761 aa23.53■■□□□ 1.36
NDEL1-217ENST00000583683 BABAM1Q9NWV8 329 aa23.53■■□□□ 1.36
NDEL1-217ENST00000583683 TSPYL4Q9UJ04 414 aa23.53■■□□□ 1.36
NDEL1-217ENST00000583683 TOGARAM1Q9Y4F4 1720 aa23.53■■□□□ 1.36
NDEL1-217ENST00000583683 QTRT2Q9H974 415 aaKnown RBP23.52■■□□□ 1.36
NDEL1-217ENST00000583683 RCAN3Q9UKA8 241 aa23.52■■□□□ 1.36
NDEL1-217ENST00000583683 SLC52A2Q9HAB3 445 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms