RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.93■□□□□ 0.14
CASC3-208ENST00000583649 C16orf71Q8IYS4 520 aaPredicted RBP15.93■□□□□ 0.14
CASC3-208ENST00000583649 USP31Q70CQ4 1352 aa15.92■□□□□ 0.14
CASC3-208ENST00000583649 IGSF1Q8N6C5 1336 aa15.91■□□□□ 0.14
CASC3-208ENST00000583649 HDGFL2Q7Z4V5 671 aaPredicted RBP15.9■□□□□ 0.14
CASC3-208ENST00000583649 ZCRB1Q8TBF4 217 aaKnown RBP15.9■□□□□ 0.14
CASC3-208ENST00000583649 NSD3Q9BZ95 1437 aa15.89■□□□□ 0.13
CASC3-208ENST00000583649 CAPN15O75808 1086 aa15.89■□□□□ 0.13
CASC3-208ENST00000583649 TNS4Q8IZW8 715 aa15.89■□□□□ 0.13
CASC3-208ENST00000583649 DNAJC5GQ8N7S2 189 aa15.89■□□□□ 0.13
CASC3-208ENST00000583649 IP6K1Q92551 441 aa15.88■□□□□ 0.13
CASC3-208ENST00000583649 AK7Q96M32 723 aa15.88■□□□□ 0.13
CASC3-208ENST00000583649 LTV1Q96GA3 475 aaPredicted RBP15.87■□□□□ 0.13
CASC3-208ENST00000583649 CGNL1Q0VF96 1302 aa15.87■□□□□ 0.13
CASC3-208ENST00000583649 TUBGCP6Q96RT7 1819 aa15.87■□□□□ 0.13
CASC3-208ENST00000583649 LY75O60449 1722 aa15.86■□□□□ 0.13
CASC3-208ENST00000583649 PRELPP51888 382 aa15.86■□□□□ 0.13
CASC3-208ENST00000583649 NME9Q86XW9 330 aa15.86■□□□□ 0.13
CASC3-208ENST00000583649 KLRG1Q96E93 195 aa15.86■□□□□ 0.13
CASC3-208ENST00000583649 RBM46Q8TBY0 533 aaKnown RBP15.85■□□□□ 0.13
CASC3-208ENST00000583649 TMC1Q8TDI8 760 aa15.85■□□□□ 0.13
CASC3-208ENST00000583649 TERF2IPQ9NYB0 399 aa15.85■□□□□ 0.13
CASC3-208ENST00000583649 FAM208AQ9UK61 1670 aaKnown RBP15.84■□□□□ 0.13
CASC3-208ENST00000583649 FSTL1Q12841 308 aa15.84■□□□□ 0.13
CASC3-208ENST00000583649 COL13A1Q5TAT6 717 aaPredicted RBP15.84■□□□□ 0.13
CASC3-208ENST00000583649 SMARCC1Q92922 1105 aaPredicted RBP15.84■□□□□ 0.13
CASC3-208ENST00000583649 NSD2O96028 1365 aa15.84■□□□□ 0.13
CASC3-208ENST00000583649 LTN1O94822 1766 aa15.83■□□□□ 0.12
CASC3-208ENST00000583649 AMPHP49418 695 aa15.83■□□□□ 0.12
CASC3-208ENST00000583649 RAPGEF4Q8WZA2 1011 aa15.83■□□□□ 0.12
CASC3-208ENST00000583649 WWC3Q9ULE0 1092 aa15.83■□□□□ 0.12
CASC3-208ENST00000583649 DOT1LQ8TEK3 1739 aa15.82■□□□□ 0.12
CASC3-208ENST00000583649 JMYQ8N9B5 988 aa15.82■□□□□ 0.12
CASC3-208ENST00000583649 ROCK2O75116 1388 aaKnown RBP15.81■□□□□ 0.12
CASC3-208ENST00000583649 PHF14O94880 888 aa15.81■□□□□ 0.12
CASC3-208ENST00000583649 SSFA2P28290 1259 aa15.81■□□□□ 0.12
CASC3-208ENST00000583649 PALLDQ8WX93 1383 aa15.81■□□□□ 0.12
CASC3-208ENST00000583649 EDC4Q6P2E9 1401 aaKnown RBP15.8■□□□□ 0.12
CASC3-208ENST00000583649 KDM2BQ8NHM5 1336 aa15.8■□□□□ 0.12
CASC3-208ENST00000583649 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.8■□□□□ 0.12
CASC3-208ENST00000583649 TGFB2P61812 414 aa15.8■□□□□ 0.12
CASC3-208ENST00000583649 ARHGAP27Q6ZUM4 889 aa15.8■□□□□ 0.12
CASC3-208ENST00000583649 MON2Q7Z3U7 1717 aa15.8■□□□□ 0.12
CASC3-208ENST00000583649 USP54Q70EL1 1684 aa15.79■□□□□ 0.12
CASC3-208ENST00000583649 SBNO2Q9Y2G9 1366 aa15.79■□□□□ 0.12
CASC3-208ENST00000583649 MPRIPQ6WCQ1 1025 aa15.79■□□□□ 0.12
CASC3-208ENST00000583649 COG3Q96JB2 828 aa15.79■□□□□ 0.12
CASC3-208ENST00000583649 BCS1LQ9Y276 419 aa15.79■□□□□ 0.12
CASC3-208ENST00000583649 C5P01031 1676 aa15.79■□□□□ 0.12
CASC3-208ENST00000583649 SMG6Q86US8 1419 aaKnown RBP15.78■□□□□ 0.12
CASC3-208ENST00000583649 PLEKHG2Q9H7P9 1386 aa15.78■□□□□ 0.12
CASC3-208ENST00000583649 PCDH11XQ9BZA7 1347 aa15.78■□□□□ 0.12
CASC3-208ENST00000583649 PCDH11YQ9BZA8 1340 aa15.78■□□□□ 0.12
CASC3-208ENST00000583649 TATP17735 454 aaPredicted RBP15.78■□□□□ 0.12
CASC3-208ENST00000583649 HOXC9P31274 260 aa15.77■□□□□ 0.12
CASC3-208ENST00000583649 NMRK2Q9NPI5 230 aa15.77■□□□□ 0.12
CASC3-208ENST00000583649 CICQ96RK0 1608 aaPredicted RBP15.76■□□□□ 0.11
CASC3-208ENST00000583649 WDR90Q96KV7 1748 aa15.75■□□□□ 0.11
CASC3-208ENST00000583649 FCHSD2O94868 740 aa15.74■□□□□ 0.11
CASC3-208ENST00000583649 SMC1BQ8NDV3 1235 aa15.74■□□□□ 0.11
CASC3-208ENST00000583649 MAP3K19Q56UN5 1328 aa15.73■□□□□ 0.11
CASC3-208ENST00000583649 MMP10P09238 476 aa15.73■□□□□ 0.11
CASC3-208ENST00000583649 NLGN1Q8N2Q7 840 aa15.73■□□□□ 0.11
CASC3-208ENST00000583649 L3MBTL2Q969R5 705 aa15.73■□□□□ 0.11
CASC3-208ENST00000583649 SLC12A5Q9H2X9 1139 aa15.73■□□□□ 0.11
CASC3-208ENST00000583649 CCDC87Q9NVE4 849 aa15.73■□□□□ 0.11
CASC3-208ENST00000583649 RTL1A6NKG5 1358 aa15.73■□□□□ 0.11
CASC3-208ENST00000583649 MEGF6O75095 1541 aa15.73■□□□□ 0.11
CASC3-208ENST00000583649 C4BP0C0L5 1744 aa15.72■□□□□ 0.11
CASC3-208ENST00000583649 GNPATO15228 680 aa15.71■□□□□ 0.11
CASC3-208ENST00000583649 C9orf131Q5VYM1 1079 aa15.71■□□□□ 0.11
CASC3-208ENST00000583649 PUS7Q96PZ0 661 aaKnown RBP15.71■□□□□ 0.11
CASC3-208ENST00000583649 LOC102724428A0A0B4J2F2 783 aa15.7■□□□□ 0.1
CASC3-208ENST00000583649 A0A0G2JLW4 131 aa15.7■□□□□ 0.1
CASC3-208ENST00000583649 SLC24A1O60721 1099 aa15.7■□□□□ 0.1
CASC3-208ENST00000583649 SIK1P57059 783 aa15.7■□□□□ 0.1
CASC3-208ENST00000583649 TMF1P82094 1093 aa15.7■□□□□ 0.1
CASC3-208ENST00000583649 HTRA3P83110 453 aa15.7■□□□□ 0.1
CASC3-208ENST00000583649 TRAPPC3LQ5T215 181 aa15.69■□□□□ 0.1
CASC3-208ENST00000583649 NBPF6Q5VWK0 638 aa15.69■□□□□ 0.1
CASC3-208ENST00000583649 NBPF4Q96M43 638 aa15.69■□□□□ 0.1
CASC3-208ENST00000583649 PARP3Q9Y6F1 533 aa15.69■□□□□ 0.1
CASC3-208ENST00000583649 A0A1W2PP64 1363 aa15.69■□□□□ 0.1
CASC3-208ENST00000583649 PXDNLA1KZ92 1463 aa15.69■□□□□ 0.1
CASC3-208ENST00000583649 CD163L1Q9NR16 1453 aa15.69■□□□□ 0.1
CASC3-208ENST00000583649 PIM2Q9P1W9 311 aa15.68■□□□□ 0.1
CASC3-208ENST00000583649 RTCBQ9Y3I0 505 aaKnown RBP15.68■□□□□ 0.1
CASC3-208ENST00000583649 TAF1LQ8IZX4 1826 aa15.68■□□□□ 0.1
CASC3-208ENST00000583649 HSPA1AP0DMV8 641 aaKnown RBP15.67■□□□□ 0.1
CASC3-208ENST00000583649 HSPA1BP0DMV9 641 aaKnown RBP15.67■□□□□ 0.1
CASC3-208ENST00000583649 ATP6V1AP38606 617 aa15.67■□□□□ 0.1
CASC3-208ENST00000583649 USHBP1Q8N6Y0 703 aa15.67■□□□□ 0.1
CASC3-208ENST00000583649 RRAGCQ9HB90 399 aa15.67■□□□□ 0.1
CASC3-208ENST00000583649 TMOD3Q9NYL9 352 aa15.67■□□□□ 0.1
CASC3-208ENST00000583649 SPG7Q9UQ90 795 aa15.67■□□□□ 0.1
CASC3-208ENST00000583649 C10orf71Q711Q0 1435 aa15.67■□□□□ 0.1
CASC3-208ENST00000583649 ADRA2BP18089 450 aa15.66■□□□□ 0.1
CASC3-208ENST00000583649 PIGBQ92521 554 aa15.66■□□□□ 0.1
CASC3-208ENST00000583649 CARD11Q9BXL7 1154 aa15.66■□□□□ 0.1
CASC3-208ENST00000583649 RNF181Q9P0P0 153 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms