RNA–Protein interactions for RNA: ENST00000583517.1

NLK-204, Transcript of nemo like kinase, humanhuman

TSL 3

Gene NLK, Length 695 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-204ENST00000583517 RGPD2P0DJD1 1756 aa16.63■□□□□ 0.25
NLK-204ENST00000583517 NSD2O96028 1365 aa16.63■□□□□ 0.25
NLK-204ENST00000583517 NBPF6Q5VWK0 638 aa16.62■□□□□ 0.25
NLK-204ENST00000583517 NBPF4Q96M43 638 aa16.62■□□□□ 0.25
NLK-204ENST00000583517 GGNBP2Q9H3C7 697 aa16.62■□□□□ 0.25
NLK-204ENST00000583517 DOT1LQ8TEK3 1739 aa16.62■□□□□ 0.25
NLK-204ENST00000583517 PRIM1P49642 420 aaKnown RBP16.61■□□□□ 0.25
NLK-204ENST00000583517 QSER1Q2KHR3 1735 aa16.6■□□□□ 0.25
NLK-204ENST00000583517 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
NLK-204ENST00000583517 ARXQ96QS3 562 aa16.6■□□□□ 0.25
NLK-204ENST00000583517 CGNL1Q0VF96 1302 aa16.6■□□□□ 0.25
NLK-204ENST00000583517 MAP3K5Q99683 1374 aa16.6■□□□□ 0.25
NLK-204ENST00000583517 SMG6Q86US8 1419 aaKnown RBP16.6■□□□□ 0.25
NLK-204ENST00000583517 KAT6BQ8WYB5 2073 aa16.6■□□□□ 0.25
NLK-204ENST00000583517 LY75O60449 1722 aa16.59■□□□□ 0.25
NLK-204ENST00000583517 SYTL4Q96C24 671 aaPredicted RBP16.59■□□□□ 0.25
NLK-204ENST00000583517 INSRP06213 1382 aa16.59■□□□□ 0.25
NLK-204ENST00000583517 KIF24Q5T7B8 1368 aa16.59■□□□□ 0.25
NLK-204ENST00000583517 USHBP1Q8N6Y0 703 aa16.58■□□□□ 0.24
NLK-204ENST00000583517 SLC16A10Q8TF71 515 aa16.58■□□□□ 0.24
NLK-204ENST00000583517 FLT4P35916 1363 aa16.58■□□□□ 0.24
NLK-204ENST00000583517 KIF20BQ96Q89 1820 aa16.58■□□□□ 0.24
NLK-204ENST00000583517 PNPLA7Q6ZV29 1317 aa16.57■□□□□ 0.24
NLK-204ENST00000583517 HSP90AB2PQ58FF8 381 aa16.57■□□□□ 0.24
NLK-204ENST00000583517 PIAS4Q8N2W9 510 aaPredicted RBP16.57■□□□□ 0.24
NLK-204ENST00000583517 COL24A1Q17RW2 1714 aa16.56■□□□□ 0.24
NLK-204ENST00000583517 KCNQ4P56696 695 aa16.56■□□□□ 0.24
NLK-204ENST00000583517 RAPGEF4Q8WZA2 1011 aa16.56■□□□□ 0.24
NLK-204ENST00000583517 CARD14Q9BXL6 1004 aa16.56■□□□□ 0.24
NLK-204ENST00000583517 TUBGCP6Q96RT7 1819 aa16.55■□□□□ 0.24
NLK-204ENST00000583517 POTEDQ86YR6 584 aa16.55■□□□□ 0.24
NLK-204ENST00000583517 TFCP2L1Q9NZI6 479 aa16.55■□□□□ 0.24
NLK-204ENST00000583517 TIMELESSQ9UNS1 1208 aa16.54■□□□□ 0.24
NLK-204ENST00000583517 NSD3Q9BZ95 1437 aa16.53■□□□□ 0.24
NLK-204ENST00000583517 PCDH11XQ9BZA7 1347 aa16.53■□□□□ 0.24
NLK-204ENST00000583517 PCDH11YQ9BZA8 1340 aa16.53■□□□□ 0.24
NLK-204ENST00000583517 TATP17735 454 aaPredicted RBP16.53■□□□□ 0.24
NLK-204ENST00000583517 CCNL1Q9UK58 526 aaPredicted RBP16.53■□□□□ 0.24
NLK-204ENST00000583517 NCAPD2Q15021 1401 aa16.53■□□□□ 0.24
NLK-204ENST00000583517 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.24
NLK-204ENST00000583517 ANKRD26Q9UPS8 1709 aa16.51■□□□□ 0.23
NLK-204ENST00000583517 POLD1P28340 1107 aa16.51■□□□□ 0.23
NLK-204ENST00000583517 CYP27B1O15528 508 aa16.5■□□□□ 0.23
NLK-204ENST00000583517 CLSPNQ9HAW4 1339 aa16.49■□□□□ 0.23
NLK-204ENST00000583517 PKD1L3Q7Z443 1732 aa16.49■□□□□ 0.23
NLK-204ENST00000583517 ZNF784Q8NCA9 323 aaPredicted RBP16.49■□□□□ 0.23
NLK-204ENST00000583517 C5P01031 1676 aa16.48■□□□□ 0.23
NLK-204ENST00000583517 TOGARAM1Q9Y4F4 1720 aa16.48■□□□□ 0.23
NLK-204ENST00000583517 WASHC2AQ641Q2 1341 aa16.47■□□□□ 0.23
NLK-204ENST00000583517 COL23A1Q86Y22 540 aaPredicted RBP16.47■□□□□ 0.23
NLK-204ENST00000583517 PALLDQ8WX93 1383 aa16.47■□□□□ 0.23
NLK-204ENST00000583517 MPRIPQ6WCQ1 1025 aa16.46■□□□□ 0.23
NLK-204ENST00000583517 CHD4Q14839 1912 aa16.46■□□□□ 0.23
NLK-204ENST00000583517 PPM1GO15355 546 aaPredicted RBP16.45■□□□□ 0.22
NLK-204ENST00000583517 HMGB2P26583 209 aaKnown RBP16.45■□□□□ 0.22
NLK-204ENST00000583517 NKX1-1Q15270 411 aaPredicted RBP16.45■□□□□ 0.22
NLK-204ENST00000583517 GPR162Q16538 588 aa16.45■□□□□ 0.22
NLK-204ENST00000583517 KLHL34Q8N239 644 aa16.45■□□□□ 0.22
NLK-204ENST00000583517 NLGN2Q8NFZ4 835 aa16.44■□□□□ 0.22
NLK-204ENST00000583517 POLKQ9UBT6 870 aa16.44■□□□□ 0.22
NLK-204ENST00000583517 TAF1LQ8IZX4 1826 aa16.44■□□□□ 0.22
NLK-204ENST00000583517 ITGB4P16144 1822 aa16.43■□□□□ 0.22
NLK-204ENST00000583517 EYA1Q99502 592 aa16.43■□□□□ 0.22
NLK-204ENST00000583517 FLAD1Q8NFF5 587 aa16.42■□□□□ 0.22
NLK-204ENST00000583517 PIGBQ92521 554 aa16.42■□□□□ 0.22
NLK-204ENST00000583517 SMARCC1Q92922 1105 aaPredicted RBP16.42■□□□□ 0.22
NLK-204ENST00000583517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.42■□□□□ 0.22
NLK-204ENST00000583517 SPG7Q9UQ90 795 aa16.42■□□□□ 0.22
NLK-204ENST00000583517 MAP2P11137 1827 aaKnown RBP16.42■□□□□ 0.22
NLK-204ENST00000583517 C4BP0C0L5 1744 aa16.42■□□□□ 0.22
NLK-204ENST00000583517 PLEKHG2Q9H7P9 1386 aa16.4■□□□□ 0.22
NLK-204ENST00000583517 MSL1Q68DK7 614 aa16.4■□□□□ 0.22
NLK-204ENST00000583517 AMIGO3Q86WK7 504 aa16.39■□□□□ 0.21
NLK-204ENST00000583517 PCGF6Q9BYE7 350 aa16.39■□□□□ 0.21
NLK-204ENST00000583517 CEP350Q5VT06 3117 aa16.39■□□□□ 0.21
NLK-204ENST00000583517 PHKG2P15735 406 aa16.38■□□□□ 0.21
NLK-204ENST00000583517 EIF4A2Q14240 407 aaKnown RBP16.38■□□□□ 0.21
NLK-204ENST00000583517 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
NLK-204ENST00000583517 AK7Q96M32 723 aa16.38■□□□□ 0.21
NLK-204ENST00000583517 LOC102724428A0A0B4J2F2 783 aa16.37■□□□□ 0.21
NLK-204ENST00000583517 YBX3P16989 372 aaKnown RBP eCLIP16.37■□□□□ 0.21
NLK-204ENST00000583517 ADRA2BP18089 450 aa16.37■□□□□ 0.21
NLK-204ENST00000583517 SIK1P57059 783 aa16.37■□□□□ 0.21
NLK-204ENST00000583517 IFNL2Q8IZJ0 200 aa16.37■□□□□ 0.21
NLK-204ENST00000583517 POLR3GLQ9BT43 218 aa16.37■□□□□ 0.21
NLK-204ENST00000583517 CD2APQ9Y5K6 639 aa16.37■□□□□ 0.21
NLK-204ENST00000583517 UBR3Q6ZT12 1888 aa16.37■□□□□ 0.21
NLK-204ENST00000583517 TNNT2P45379 298 aaPredicted RBP16.36■□□□□ 0.21
NLK-204ENST00000583517 EIF4G2P78344 907 aaKnown RBP eCLIP16.36■□□□□ 0.21
NLK-204ENST00000583517 TMOD3Q9NYL9 352 aa16.36■□□□□ 0.21
NLK-204ENST00000583517 GRIN3BO60391 1043 aa16.35■□□□□ 0.21
NLK-204ENST00000583517 HSPA5P11021 654 aaKnown RBP16.35■□□□□ 0.21
NLK-204ENST00000583517 LINC00116Q8NCU8 138 aa16.35■□□□□ 0.21
NLK-204ENST00000583517 ASAP1Q9ULH1 1129 aa16.35■□□□□ 0.21
NLK-204ENST00000583517 IGSF1Q8N6C5 1336 aa16.35■□□□□ 0.21
NLK-204ENST00000583517 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.34■□□□□ 0.21
NLK-204ENST00000583517 SSFA2P28290 1259 aa16.34■□□□□ 0.21
NLK-204ENST00000583517 PANK3Q9H999 370 aa16.34■□□□□ 0.21
NLK-204ENST00000583517 PHF14O94880 888 aa16.33■□□□□ 0.2
NLK-204ENST00000583517 ITPK1Q13572 414 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms