RNA–Protein interactions for RNA: ENST00000583206.1

TVP23C-209, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-209ENST00000583206 CD163L1Q9NR16 1453 aa13.53□□□□□ -0.24
TVP23C-209ENST00000583206 LY75O60449 1722 aa13.53□□□□□ -0.24
TVP23C-209ENST00000583206 IP6K1Q92551 441 aa13.52□□□□□ -0.25
TVP23C-209ENST00000583206 SYTL4Q96C24 671 aaPredicted RBP13.52□□□□□ -0.25
TVP23C-209ENST00000583206 USP54Q70EL1 1684 aa13.51□□□□□ -0.25
TVP23C-209ENST00000583206 AMIGO3Q86WK7 504 aa13.5□□□□□ -0.25
TVP23C-209ENST00000583206 L3MBTL2Q969R5 705 aa13.5□□□□□ -0.25
TVP23C-209ENST00000583206 PCNTO95613 3336 aa13.49□□□□□ -0.25
TVP23C-209ENST00000583206 MSH5O43196 834 aa13.49□□□□□ -0.25
TVP23C-209ENST00000583206 MON2Q7Z3U7 1717 aa13.49□□□□□ -0.25
TVP23C-209ENST00000583206 ZCRB1Q8TBF4 217 aaKnown RBP13.48□□□□□ -0.25
TVP23C-209ENST00000583206 LTN1O94822 1766 aa13.48□□□□□ -0.25
TVP23C-209ENST00000583206 APLP1P51693 650 aa13.47□□□□□ -0.25
TVP23C-209ENST00000583206 LTV1Q96GA3 475 aaPredicted RBP13.47□□□□□ -0.25
TVP23C-209ENST00000583206 SLC12A5Q9H2X9 1139 aa13.47□□□□□ -0.25
TVP23C-209ENST00000583206 IGSF1Q8N6C5 1336 aa13.46□□□□□ -0.25
TVP23C-209ENST00000583206 FBLN1P23142 703 aa13.46□□□□□ -0.25
TVP23C-209ENST00000583206 USP47Q96K76 1375 aa13.45□□□□□ -0.26
TVP23C-209ENST00000583206 MEGF6O75095 1541 aa13.45□□□□□ -0.26
TVP23C-209ENST00000583206 FLAD1Q8NFF5 587 aa13.45□□□□□ -0.26
TVP23C-209ENST00000583206 WWC3Q9ULE0 1092 aa13.45□□□□□ -0.26
TVP23C-209ENST00000583206 DOT1LQ8TEK3 1739 aa13.44□□□□□ -0.26
TVP23C-209ENST00000583206 FAM208AQ9UK61 1670 aaKnown RBP13.44□□□□□ -0.26
TVP23C-209ENST00000583206 TOMM70O94826 608 aa13.44□□□□□ -0.26
TVP23C-209ENST00000583206 HOXC9P31274 260 aa13.44□□□□□ -0.26
TVP23C-209ENST00000583206 COL13A1Q5TAT6 717 aaPredicted RBP13.44□□□□□ -0.26
TVP23C-209ENST00000583206 SMIM5Q71RC9 77 aa13.44□□□□□ -0.26
TVP23C-209ENST00000583206 MAP3K19Q56UN5 1328 aa13.43□□□□□ -0.26
TVP23C-209ENST00000583206 NBPF6Q5VWK0 638 aa13.43□□□□□ -0.26
TVP23C-209ENST00000583206 EDC4Q6P2E9 1401 aaKnown RBP13.43□□□□□ -0.26
TVP23C-209ENST00000583206 NBPF4Q96M43 638 aa13.43□□□□□ -0.26
TVP23C-209ENST00000583206 ROCK2O75116 1388 aaKnown RBP13.42□□□□□ -0.26
TVP23C-209ENST00000583206 TMC1Q8TDI8 760 aa13.41□□□□□ -0.26
TVP23C-209ENST00000583206 A0A1W2PP64 1363 aa13.41□□□□□ -0.26
TVP23C-209ENST00000583206 CICQ96RK0 1608 aaPredicted RBP13.4□□□□□ -0.26
TVP23C-209ENST00000583206 HDGFL2Q7Z4V5 671 aaPredicted RBP13.4□□□□□ -0.26
TVP23C-209ENST00000583206 JMYQ8N9B5 988 aa13.4□□□□□ -0.26
TVP23C-209ENST00000583206 PALLDQ8WX93 1383 aa13.4□□□□□ -0.26
TVP23C-209ENST00000583206 CGNL1Q0VF96 1302 aa13.39□□□□□ -0.27
TVP23C-209ENST00000583206 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
TVP23C-209ENST00000583206 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.39□□□□□ -0.27
TVP23C-209ENST00000583206 NMRK2Q9NPI5 230 aa13.39□□□□□ -0.27
TVP23C-209ENST00000583206 C5P01031 1676 aa13.39□□□□□ -0.27
TVP23C-209ENST00000583206 RGPD2P0DJD1 1756 aa13.38□□□□□ -0.27
TVP23C-209ENST00000583206 CYP27B1O15528 508 aa13.38□□□□□ -0.27
TVP23C-209ENST00000583206 HMGB2P26583 209 aaKnown RBP13.38□□□□□ -0.27
TVP23C-209ENST00000583206 HTRA3P83110 453 aa13.38□□□□□ -0.27
TVP23C-209ENST00000583206 USHBP1Q8N6Y0 703 aa13.38□□□□□ -0.27
TVP23C-209ENST00000583206 KLRG1Q96E93 195 aa13.38□□□□□ -0.27
TVP23C-209ENST00000583206 SIN3AQ96ST3 1273 aa13.38□□□□□ -0.27
TVP23C-209ENST00000583206 TERF2IPQ9NYB0 399 aa13.38□□□□□ -0.27
TVP23C-209ENST00000583206 TAF1LQ8IZX4 1826 aa13.38□□□□□ -0.27
TVP23C-209ENST00000583206 AMPHP49418 695 aa13.37□□□□□ -0.27
TVP23C-209ENST00000583206 MPRIPQ6WCQ1 1025 aa13.37□□□□□ -0.27
TVP23C-209ENST00000583206 PUS7Q96PZ0 661 aaKnown RBP13.37□□□□□ -0.27
TVP23C-209ENST00000583206 C4BP0C0L5 1744 aa13.36□□□□□ -0.27
TVP23C-209ENST00000583206 PHF14O94880 888 aa13.36□□□□□ -0.27
TVP23C-209ENST00000583206 SSFA2P28290 1259 aa13.36□□□□□ -0.27
TVP23C-209ENST00000583206 LINC00116Q8NCU8 138 aa13.36□□□□□ -0.27
TVP23C-209ENST00000583206 PIGBQ92521 554 aa13.36□□□□□ -0.27
TVP23C-209ENST00000583206 AK7Q96M32 723 aa13.36□□□□□ -0.27
TVP23C-209ENST00000583206 RBM46Q8TBY0 533 aaKnown RBP13.35□□□□□ -0.27
TVP23C-209ENST00000583206 COG3Q96JB2 828 aa13.35□□□□□ -0.27
TVP23C-209ENST00000583206 UBR3Q6ZT12 1888 aa13.35□□□□□ -0.27
TVP23C-209ENST00000583206 PXDNLA1KZ92 1463 aa13.35□□□□□ -0.27
TVP23C-209ENST00000583206 PRELPP51888 382 aa13.34□□□□□ -0.27
TVP23C-209ENST00000583206 TGFB2P61812 414 aa13.34□□□□□ -0.27
TVP23C-209ENST00000583206 RRS1Q15050 365 aaKnown RBP13.34□□□□□ -0.27
TVP23C-209ENST00000583206 NKX1-1Q15270 411 aaPredicted RBP13.34□□□□□ -0.27
TVP23C-209ENST00000583206 RAPGEF4Q8WZA2 1011 aa13.34□□□□□ -0.27
TVP23C-209ENST00000583206 SMARCC1Q92922 1105 aaPredicted RBP13.34□□□□□ -0.27
TVP23C-209ENST00000583206 A0A0G2JLW4 131 aa13.33□□□□□ -0.28
TVP23C-209ENST00000583206 MMP10P09238 476 aa13.33□□□□□ -0.28
TVP23C-209ENST00000583206 ITPK1Q13572 414 aa13.33□□□□□ -0.28
TVP23C-209ENST00000583206 PCDH11XQ9BZA7 1347 aa13.33□□□□□ -0.28
TVP23C-209ENST00000583206 PCDH11YQ9BZA8 1340 aa13.33□□□□□ -0.28
TVP23C-209ENST00000583206 KIAA1551Q9HCM1 1747 aa13.33□□□□□ -0.28
TVP23C-209ENST00000583206 RTL1A6NKG5 1358 aa13.32□□□□□ -0.28
TVP23C-209ENST00000583206 MAP2P11137 1827 aaKnown RBP13.32□□□□□ -0.28
TVP23C-209ENST00000583206 NSD3Q9BZ95 1437 aa13.32□□□□□ -0.28
TVP23C-209ENST00000583206 LOC102724428A0A0B4J2F2 783 aa13.32□□□□□ -0.28
TVP23C-209ENST00000583206 CAPN15O75808 1086 aa13.32□□□□□ -0.28
TVP23C-209ENST00000583206 TATP17735 454 aaPredicted RBP13.32□□□□□ -0.28
TVP23C-209ENST00000583206 KCNA3P22001 575 aa13.32□□□□□ -0.28
TVP23C-209ENST00000583206 SIK1P57059 783 aa13.32□□□□□ -0.28
TVP23C-209ENST00000583206 HSP90AB2PQ58FF8 381 aa13.32□□□□□ -0.28
TVP23C-209ENST00000583206 BCS1LQ9Y276 419 aa13.32□□□□□ -0.28
TVP23C-209ENST00000583206 WDR90Q96KV7 1748 aa13.31□□□□□ -0.28
TVP23C-209ENST00000583206 FSTL1Q12841 308 aa13.31□□□□□ -0.28
TVP23C-209ENST00000583206 ARHGAP27Q6ZUM4 889 aa13.31□□□□□ -0.28
TVP23C-209ENST00000583206 FYB1O15117 783 aa13.3□□□□□ -0.28
TVP23C-209ENST00000583206 DPEP1P16444 411 aa13.3□□□□□ -0.28
TVP23C-209ENST00000583206 C9orf131Q5VYM1 1079 aa13.3□□□□□ -0.28
TVP23C-209ENST00000583206 TNS4Q8IZW8 715 aa13.3□□□□□ -0.28
TVP23C-209ENST00000583206 TESK2Q96S53 571 aa13.3□□□□□ -0.28
TVP23C-209ENST00000583206 KIF13BQ9NQT8 1826 aa13.29□□□□□ -0.28
TVP23C-209ENST00000583206 GNPATO15228 680 aa13.29□□□□□ -0.28
TVP23C-209ENST00000583206 CARD11Q9BXL7 1154 aa13.29□□□□□ -0.28
TVP23C-209ENST00000583206 ASAP1Q9ULH1 1129 aa13.29□□□□□ -0.28
TVP23C-209ENST00000583206 INSRP06213 1382 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms