RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 MAP2P11137 1827 aaKnown RBP11.13□□□□□ -0.63
KPNB1-213ENST00000583013 SBF2Q86WG5 1849 aa11.12□□□□□ -0.63
KPNB1-213ENST00000583013 OVOS2A0A0G2JMS6 1433 aa11.12□□□□□ -0.63
KPNB1-213ENST00000583013 FXR2P51116 673 aaKnown RBP eCLIP11.12□□□□□ -0.633e-7■■■□□ 16.7
KPNB1-213ENST00000583013 PDE3BQ13370 1112 aa11.12□□□□□ -0.63
KPNB1-213ENST00000583013 DDB1Q16531 1140 aa11.12□□□□□ -0.63
KPNB1-213ENST00000583013 POTEHQ6S545 545 aa11.12□□□□□ -0.63
KPNB1-213ENST00000583013 FAM196AQ6ZSG2 479 aa11.12□□□□□ -0.63
KPNB1-213ENST00000583013 PIP4P2Q8N4L2 257 aa11.12□□□□□ -0.63
KPNB1-213ENST00000583013 NLRP2Q9NX02 1062 aa11.12□□□□□ -0.63
KPNB1-213ENST00000583013 INSRP06213 1382 aa11.12□□□□□ -0.63
KPNB1-213ENST00000583013 BCL9O00512 1426 aa11.11□□□□□ -0.63
KPNB1-213ENST00000583013 SMG6Q86US8 1419 aaKnown RBP11.11□□□□□ -0.63
KPNB1-213ENST00000583013 FAM182BQ5T319 152 aa11.11□□□□□ -0.63
KPNB1-213ENST00000583013 WASHC2AQ641Q2 1341 aa11.1□□□□□ -0.63
KPNB1-213ENST00000583013 SHANK3Q9BYB0 1731 aa11.1□□□□□ -0.63
KPNB1-213ENST00000583013 IL2RBP14784 551 aa11.1□□□□□ -0.63
KPNB1-213ENST00000583013 SF3B2Q13435 895 aaKnown RBP11.1□□□□□ -0.63
KPNB1-213ENST00000583013 RGPD3A6NKT7 1758 aaPredicted RBP11.1□□□□□ -0.63
KPNB1-213ENST00000583013 RGPD4Q7Z3J3 1758 aa11.1□□□□□ -0.63
KPNB1-213ENST00000583013 LTV1Q96GA3 475 aaPredicted RBP11.09□□□□□ -0.63
KPNB1-213ENST00000583013 KNSTRNQ9Y448 316 aa11.09□□□□□ -0.63
KPNB1-213ENST00000583013 EMILIN1Q9Y6C2 1016 aa11.09□□□□□ -0.63
KPNB1-213ENST00000583013 NCAPD2Q15021 1401 aa11.09□□□□□ -0.63
KPNB1-213ENST00000583013 RREB1Q92766 1687 aa11.08□□□□□ -0.64
KPNB1-213ENST00000583013 PER1O15534 1290 aaPredicted RBP11.08□□□□□ -0.64
KPNB1-213ENST00000583013 HSP90AB2PQ58FF8 381 aa11.08□□□□□ -0.64
KPNB1-213ENST00000583013 AMER1Q5JTC6 1135 aaPredicted RBP11.08□□□□□ -0.64
KPNB1-213ENST00000583013 POLKQ9UBT6 870 aa11.08□□□□□ -0.64
KPNB1-213ENST00000583013 MEGF6O75095 1541 aa11.08□□□□□ -0.64
KPNB1-213ENST00000583013 NHSQ6T4R5 1651 aa11.08□□□□□ -0.64
KPNB1-213ENST00000583013 NPC1L1Q9UHC9 1359 aa11.07□□□□□ -0.64
KPNB1-213ENST00000583013 EXOC5O00471 708 aa11.07□□□□□ -0.64
KPNB1-213ENST00000583013 BAG6P46379 1132 aa11.07□□□□□ -0.64
KPNB1-213ENST00000583013 MARCH10Q8NA82 808 aaPredicted RBP11.07□□□□□ -0.64
KPNB1-213ENST00000583013 PKD1L3Q7Z443 1732 aa11.06□□□□□ -0.64
KPNB1-213ENST00000583013 PARD3Q8TEW0 1356 aa11.06□□□□□ -0.64
KPNB1-213ENST00000583013 TRIM37O94972 964 aa11.06□□□□□ -0.64
KPNB1-213ENST00000583013 NBPF6Q5VWK0 638 aa11.06□□□□□ -0.64
KPNB1-213ENST00000583013 DEFB132Q7Z7B7 95 aa11.06□□□□□ -0.64
KPNB1-213ENST00000583013 NBPF4Q96M43 638 aa11.06□□□□□ -0.64
KPNB1-213ENST00000583013 MORC1Q86VD1 984 aa11.05□□□□□ -0.64
KPNB1-213ENST00000583013 NUP188Q5SRE5 1749 aa11.04□□□□□ -0.64
KPNB1-213ENST00000583013 PPM1GO15355 546 aaPredicted RBP11.04□□□□□ -0.64
KPNB1-213ENST00000583013 TNNT2P45379 298 aaPredicted RBP11.04□□□□□ -0.64
KPNB1-213ENST00000583013 PLEKHG2Q9H7P9 1386 aa11.03□□□□□ -0.64
KPNB1-213ENST00000583013 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
KPNB1-213ENST00000583013 USHBP1Q8N6Y0 703 aa11.03□□□□□ -0.64
KPNB1-213ENST00000583013 DOT1LQ8TEK3 1739 aa11.03□□□□□ -0.64
KPNB1-213ENST00000583013 APBA3O96018 575 aa11.02□□□□□ -0.65
KPNB1-213ENST00000583013 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.65
KPNB1-213ENST00000583013 EIF4A2Q14240 407 aaKnown RBP11.02□□□□□ -0.65
KPNB1-213ENST00000583013 RAPGEF4Q8WZA2 1011 aa11.02□□□□□ -0.65
KPNB1-213ENST00000583013 CAMKK2Q96RR4 588 aa11.02□□□□□ -0.65
KPNB1-213ENST00000583013 BCL11BQ9C0K0 894 aaPredicted RBP11.02□□□□□ -0.65
KPNB1-213ENST00000583013 BTAF1O14981 1849 aa11.02□□□□□ -0.65
KPNB1-213ENST00000583013 ZCRB1Q8TBF4 217 aaKnown RBP11.01□□□□□ -0.65
KPNB1-213ENST00000583013 EYA1Q99502 592 aa11.01□□□□□ -0.65
KPNB1-213ENST00000583013 IGSF1Q8N6C5 1336 aa11.01□□□□□ -0.65
KPNB1-213ENST00000583013 PLSCR1O15162 318 aa11□□□□□ -0.65
KPNB1-213ENST00000583013 TATP17735 454 aaPredicted RBP11□□□□□ -0.65
KPNB1-213ENST00000583013 EZH2Q15910 746 aaKnown RBP11□□□□□ -0.65
KPNB1-213ENST00000583013 TOGARAM1Q9Y4F4 1720 aa10.99□□□□□ -0.65
KPNB1-213ENST00000583013 CC2D1BQ5T0F9 858 aaKnown RBP10.99□□□□□ -0.65
KPNB1-213ENST00000583013 CHADLQ6NUI6 762 aa10.99□□□□□ -0.65
KPNB1-213ENST00000583013 PTF1AQ7RTS3 328 aa10.99□□□□□ -0.65
KPNB1-213ENST00000583013 PCDH11XQ9BZA7 1347 aa10.99□□□□□ -0.65
KPNB1-213ENST00000583013 PCDH11YQ9BZA8 1340 aa10.99□□□□□ -0.65
KPNB1-213ENST00000583013 DDX54Q8TDD1 881 aaKnown RBP10.98□□□□□ -0.65
KPNB1-213ENST00000583013 COL3A1P02461 1466 aaPredicted RBP10.98□□□□□ -0.65
KPNB1-213ENST00000583013 KCNQ2O43526 872 aa10.97□□□□□ -0.65
KPNB1-213ENST00000583013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.651e-20■□□□□ 8.9
KPNB1-213ENST00000583013 KDRP35968 1356 aa10.97□□□□□ -0.65
KPNB1-213ENST00000583013 LY75O60449 1722 aa10.97□□□□□ -0.65
KPNB1-213ENST00000583013 PAPPAQ13219 1627 aa10.96□□□□□ -0.65
KPNB1-213ENST00000583013 ZEB1P37275 1124 aaPredicted RBP10.96□□□□□ -0.65
KPNB1-213ENST00000583013 MTHFSP49914 203 aa10.96□□□□□ -0.65
KPNB1-213ENST00000583013 ACSBG1Q96GR2 724 aa10.96□□□□□ -0.65
KPNB1-213ENST00000583013 ITGB4P16144 1822 aa10.95□□□□□ -0.66
KPNB1-213ENST00000583013 CYP27B1O15528 508 aa10.95□□□□□ -0.66
KPNB1-213ENST00000583013 IL13P35225 146 aa10.95□□□□□ -0.66
KPNB1-213ENST00000583013 SPG7Q9UQ90 795 aa10.95□□□□□ -0.66
KPNB1-213ENST00000583013 LRP5O75197 1615 aa10.95□□□□□ -0.66
KPNB1-213ENST00000583013 NKX1-1Q15270 411 aaPredicted RBP10.94□□□□□ -0.66
KPNB1-213ENST00000583013 CREBZFQ9NS37 354 aa10.94□□□□□ -0.66
KPNB1-213ENST00000583013 FBXO3Q9UK99 471 aa10.94□□□□□ -0.66
KPNB1-213ENST00000583013 SRCAPQ6ZRS2 3230 aa10.94□□□□□ -0.66
KPNB1-213ENST00000583013 TXNRD1Q16881 649 aa10.93□□□□□ -0.66
KPNB1-213ENST00000583013 CASZ1Q86V15 1759 aa10.93□□□□□ -0.66
KPNB1-213ENST00000583013 DIAPH1O60610 1272 aaKnown RBP10.92□□□□□ -0.66
KPNB1-213ENST00000583013 PHKG2P15735 406 aa10.92□□□□□ -0.66
KPNB1-213ENST00000583013 PRIM1P49642 420 aaKnown RBP10.92□□□□□ -0.66
KPNB1-213ENST00000583013 R3HDM1Q15032 1099 aaKnown RBP10.92□□□□□ -0.66
KPNB1-213ENST00000583013 NBPF14Q5TI25 921 aa10.92□□□□□ -0.66
KPNB1-213ENST00000583013 AEBP1Q8IUX7 1158 aa10.92□□□□□ -0.66
KPNB1-213ENST00000583013 IFNL2Q8IZJ0 200 aa10.92□□□□□ -0.66
KPNB1-213ENST00000583013 PSDA5PKW4 1024 aaPredicted RBP10.91□□□□□ -0.66
KPNB1-213ENST00000583013 AMOTQ4VCS5 1084 aa10.91□□□□□ -0.66
KPNB1-213ENST00000583013 SULT6B1Q6IMI4 303 aa10.91□□□□□ -0.66
KPNB1-213ENST00000583013 SYTL4Q96C24 671 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms