RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 LTV1Q96GA3 475 aaPredicted RBP21.95■■□□□ 1.1
ERBB2-212ENST00000582788 PHRF1Q9P1Y6 1649 aaKnown RBP21.94■■□□□ 1.1
ERBB2-212ENST00000582788 IL27Q8NEV9 243 aa21.94■■□□□ 1.1
ERBB2-212ENST00000582788 DDX17Q92841 729 aaKnown RBP21.94■■□□□ 1.1
ERBB2-212ENST00000582788 CFAP44Q96MT7 982 aa21.94■■□□□ 1.1
ERBB2-212ENST00000582788 MBIPQ9NS73 344 aa21.94■■□□□ 1.1
ERBB2-212ENST00000582788 ALS2Q96Q42 1657 aa21.94■■□□□ 1.1
ERBB2-212ENST00000582788 RLBP1P12271 317 aa21.93■■□□□ 1.1
ERBB2-212ENST00000582788 MTHFSDQ2M296 383 aaKnown RBP21.93■■□□□ 1.1
ERBB2-212ENST00000582788 SSH1Q8WYL5 1049 aa21.93■■□□□ 1.1
ERBB2-212ENST00000582788 TNNQ9UQP3 1299 aa21.93■■□□□ 1.1
ERBB2-212ENST00000582788 PLEKHG5O94827 1062 aa21.92■■□□□ 1.1
ERBB2-212ENST00000582788 FBXO41Q8TF61 875 aa21.92■■□□□ 1.1
ERBB2-212ENST00000582788 SMC4Q9NTJ3 1288 aa21.92■■□□□ 1.1
ERBB2-212ENST00000582788 ZBTB7CA1YPR0 619 aa21.91■■□□□ 1.1
ERBB2-212ENST00000582788 PCDHB15Q9Y5E8 787 aa21.91■■□□□ 1.1
ERBB2-212ENST00000582788 SEC24BO95487 1268 aa21.9■■□□□ 1.1
ERBB2-212ENST00000582788 MCM10Q7L590 875 aa21.9■■□□□ 1.1
ERBB2-212ENST00000582788 ARHGEF25Q86VW2 580 aa21.9■■□□□ 1.1
ERBB2-212ENST00000582788 USHBP1Q8N6Y0 703 aa21.88■■□□□ 1.09
ERBB2-212ENST00000582788 TSPYL6Q8N831 410 aa21.88■■□□□ 1.09
ERBB2-212ENST00000582788 MED1Q15648 1581 aaPredicted RBP21.88■■□□□ 1.09
ERBB2-212ENST00000582788 VAMP4O75379 141 aa21.87■■□□□ 1.09
ERBB2-212ENST00000582788 ZKSCAN2Q63HK3 967 aa21.87■■□□□ 1.09
ERBB2-212ENST00000582788 NPHP3Q7Z494 1330 aa21.87■■□□□ 1.09
ERBB2-212ENST00000582788 FRAT2O75474 233 aaPredicted RBP21.87■■□□□ 1.09
ERBB2-212ENST00000582788 ALDH1L2Q3SY69 923 aa21.87■■□□□ 1.09
ERBB2-212ENST00000582788 GAS2L2Q8NHY3 880 aa21.87■■□□□ 1.09
ERBB2-212ENST00000582788 NBPF6Q5VWK0 638 aa21.86■■□□□ 1.09
ERBB2-212ENST00000582788 NBPF4Q96M43 638 aa21.86■■□□□ 1.09
ERBB2-212ENST00000582788 ILDR1Q86SU0 546 aaPredicted RBP21.85■■□□□ 1.09
ERBB2-212ENST00000582788 CRB1P82279 1406 aa21.85■■□□□ 1.09
ERBB2-212ENST00000582788 RGPD2P0DJD1 1756 aa21.85■■□□□ 1.09
ERBB2-212ENST00000582788 ZNF428Q96B54 188 aa21.85■■□□□ 1.09
ERBB2-212ENST00000582788 PXDNQ92626 1479 aa21.85■■□□□ 1.09
ERBB2-212ENST00000582788 C8orf58Q8NAV2 365 aa21.84■■□□□ 1.09
ERBB2-212ENST00000582788 NOB1Q9ULX3 412 aaKnown RBP21.84■■□□□ 1.09
ERBB2-212ENST00000582788 PDZRN3Q9UPQ7 1066 aa21.84■■□□□ 1.09
ERBB2-212ENST00000582788 ELL2O00472 640 aaPredicted RBP21.84■■□□□ 1.09
ERBB2-212ENST00000582788 CHL1O00533 1208 aa21.84■■□□□ 1.09
ERBB2-212ENST00000582788 UBAP1LF5GYI3 381 aa21.83■■□□□ 1.09
ERBB2-212ENST00000582788 TRIM27P14373 513 aa21.83■■□□□ 1.09
ERBB2-212ENST00000582788 BRINP3Q76B58 766 aa21.83■■□□□ 1.09
ERBB2-212ENST00000582788 RTF1Q92541 710 aaKnown RBP21.83■■□□□ 1.09
ERBB2-212ENST00000582788 TNS3Q68CZ2 1445 aa21.82■■□□□ 1.08
ERBB2-212ENST00000582788 MVPQ14764 893 aaKnown RBP21.82■■□□□ 1.08
ERBB2-212ENST00000582788 TWISTNBQ3B726 338 aaPredicted RBP21.82■■□□□ 1.08
ERBB2-212ENST00000582788 DZIP1LQ8IYY4 767 aaKnown RBP21.82■■□□□ 1.08
ERBB2-212ENST00000582788 LRRC59Q96AG4 307 aaKnown RBP21.82■■□□□ 1.08
ERBB2-212ENST00000582788 RWDD1Q9H446 243 aaPredicted RBP21.82■■□□□ 1.08
ERBB2-212ENST00000582788 AXIN2Q9Y2T1 843 aa21.82■■□□□ 1.08
ERBB2-212ENST00000582788 ATF7IPQ6VMQ6 1270 aa21.82■■□□□ 1.08
ERBB2-212ENST00000582788 KIF16BQ96L93 1317 aa21.81■■□□□ 1.08
ERBB2-212ENST00000582788 BRPF1P55201 1214 aaPredicted RBP21.81■■□□□ 1.08
ERBB2-212ENST00000582788 BECN1Q14457 450 aa21.81■■□□□ 1.08
ERBB2-212ENST00000582788 ZC3H6P61129 1189 aaKnown RBP21.8■■□□□ 1.08
ERBB2-212ENST00000582788 HTATSF1O43719 755 aaKnown RBP21.8■■□□□ 1.08
ERBB2-212ENST00000582788 FTSJ3Q8IY81 847 aaKnown RBP21.8■■□□□ 1.08
ERBB2-212ENST00000582788 ANKRD24Q8TF21 1146 aa21.8■■□□□ 1.08
ERBB2-212ENST00000582788 SPATA31A3Q5VYP0 1347 aa21.79■■□□□ 1.08
ERBB2-212ENST00000582788 GNAT3A8MTJ3 354 aa21.79■■□□□ 1.08
ERBB2-212ENST00000582788 TBC1D32Q96NH3 1257 aa21.79■■□□□ 1.08
ERBB2-212ENST00000582788 LRRC37A3O60309 1634 aa21.79■■□□□ 1.08
ERBB2-212ENST00000582788 TOM1O60784 492 aa21.79■■□□□ 1.08
ERBB2-212ENST00000582788 MRPL50Q8N5N7 158 aaKnown RBP21.79■■□□□ 1.08
ERBB2-212ENST00000582788 SLAIN2Q9P270 581 aa21.79■■□□□ 1.08
ERBB2-212ENST00000582788 BRPF3Q9ULD4 1205 aa21.79■■□□□ 1.08
ERBB2-212ENST00000582788 RGPD5Q99666 1765 aa21.78■■□□□ 1.08
ERBB2-212ENST00000582788 NCAPD2Q15021 1401 aa21.78■■□□□ 1.08
ERBB2-212ENST00000582788 KRT24Q2M2I5 525 aa21.77■■□□□ 1.08
ERBB2-212ENST00000582788 CABLES1Q8TDN4 633 aa21.77■■□□□ 1.08
ERBB2-212ENST00000582788 MAP3K5Q99683 1374 aa21.77■■□□□ 1.08
ERBB2-212ENST00000582788 IPO8O15397 1037 aaKnown RBP21.77■■□□□ 1.07
ERBB2-212ENST00000582788 MIS18AQ9NYP9 233 aa21.77■■□□□ 1.07
ERBB2-212ENST00000582788 CRYBG1Q9Y4K1 1723 aa21.77■■□□□ 1.07
ERBB2-212ENST00000582788 CAMTA1Q9Y6Y1 1673 aa21.76■■□□□ 1.07
ERBB2-212ENST00000582788 KIAA0232Q92628 1395 aa21.75■■□□□ 1.07
ERBB2-212ENST00000582788 UPF2Q9HAU5 1272 aaKnown RBP21.75■■□□□ 1.07
ERBB2-212ENST00000582788 IL17REQ8NFR9 667 aa21.75■■□□□ 1.07
ERBB2-212ENST00000582788 ANO8Q9HCE9 1232 aaPredicted RBP21.75■■□□□ 1.07
ERBB2-212ENST00000582788 RTN4Q9NQC3 1192 aaKnown RBP21.75■■□□□ 1.07
ERBB2-212ENST00000582788 PRKCSHP14314 528 aaPredicted RBP21.74■■□□□ 1.07
ERBB2-212ENST00000582788 ERBB3P21860 1342 aa21.74■■□□□ 1.07
ERBB2-212ENST00000582788 ANTXR1Q9H6X2 564 aa21.73■■□□□ 1.07
ERBB2-212ENST00000582788 TSPYL4Q9UJ04 414 aa21.73■■□□□ 1.07
ERBB2-212ENST00000582788 TMEM57Q8N5G2 664 aa21.73■■□□□ 1.07
ERBB2-212ENST00000582788 COL18A1P39060 1754 aa21.73■■□□□ 1.07
ERBB2-212ENST00000582788 SOS2Q07890 1332 aaPredicted RBP21.72■■□□□ 1.07
ERBB2-212ENST00000582788 ITPRIPQ8IWB1 547 aa21.72■■□□□ 1.07
ERBB2-212ENST00000582788 ARHGAP45Q92619 1136 aa21.72■■□□□ 1.07
ERBB2-212ENST00000582788 PIP4K2BP78356 416 aa21.71■■□□□ 1.07
ERBB2-212ENST00000582788 HDAC1Q13547 482 aaPredicted RBP21.71■■□□□ 1.07
ERBB2-212ENST00000582788 LMO7Q8WWI1 1683 aa21.71■■□□□ 1.07
ERBB2-212ENST00000582788 DDX19BQ9UMR2 479 aa21.7■■□□□ 1.06
ERBB2-212ENST00000582788 TBC1D2Q9BYX2 928 aa21.69■■□□□ 1.06
ERBB2-212ENST00000582788 HAP1P54257 671 aaPredicted RBP21.68■■□□□ 1.06
ERBB2-212ENST00000582788 PLEKHO1Q53GL0 409 aaPredicted RBP21.68■■□□□ 1.06
ERBB2-212ENST00000582788 SLKQ9H2G2 1235 aaPredicted RBP21.68■■□□□ 1.06
ERBB2-212ENST00000582788 CEMIPQ8WUJ3 1361 aa21.68■■□□□ 1.06
ERBB2-212ENST00000582788 CHRNA2Q15822 529 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms