RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 DDX54Q8TDD1 881 aaKnown RBP25.71■■□□□ 1.71
LIMS2-218ENST00000582671 ACSBG1Q96GR2 724 aa25.71■■□□□ 1.71
LIMS2-218ENST00000582671 PLSCR1O15162 318 aa25.7■■□□□ 1.7
LIMS2-218ENST00000582671 KNSTRNQ9Y448 316 aa25.7■■□□□ 1.7
LIMS2-218ENST00000582671 R3HDM1Q15032 1099 aaKnown RBP25.68■■□□□ 1.7
LIMS2-218ENST00000582671 AMER1Q5JTC6 1135 aaPredicted RBP25.68■■□□□ 1.7
LIMS2-218ENST00000582671 ZCRB1Q8TBF4 217 aaKnown RBP25.68■■□□□ 1.7
LIMS2-218ENST00000582671 NCAPD2Q15021 1401 aa25.68■■□□□ 1.7
LIMS2-218ENST00000582671 PKD1L3Q7Z443 1732 aa25.68■■□□□ 1.7
LIMS2-218ENST00000582671 PER1O15534 1290 aaPredicted RBP25.66■■□□□ 1.7
LIMS2-218ENST00000582671 MORC1Q86VD1 984 aa25.66■■□□□ 1.7
LIMS2-218ENST00000582671 PROM2Q8N271 834 aa25.66■■□□□ 1.7
LIMS2-218ENST00000582671 RAPGEF4Q8WZA2 1011 aa25.65■■□□□ 1.7
LIMS2-218ENST00000582671 TATP17735 454 aaPredicted RBP25.64■■□□□ 1.7
LIMS2-218ENST00000582671 EYA1Q99502 592 aa25.64■■□□□ 1.7
LIMS2-218ENST00000582671 EIF4A2Q14240 407 aaKnown RBP25.63■■□□□ 1.69
LIMS2-218ENST00000582671 LRP5O75197 1615 aa25.62■■□□□ 1.69
LIMS2-218ENST00000582671 ITGB4P16144 1822 aa25.6■■□□□ 1.69
LIMS2-218ENST00000582671 TOGARAM1Q9Y4F4 1720 aa25.6■■□□□ 1.69
LIMS2-218ENST00000582671 TXNRD1Q16881 649 aa25.59■■□□□ 1.69
LIMS2-218ENST00000582671 NBPF14Q5TI25 921 aa25.59■■□□□ 1.69
LIMS2-218ENST00000582671 LY75O60449 1722 aa25.57■■□□□ 1.68
LIMS2-218ENST00000582671 PRIM1P49642 420 aaKnown RBP25.56■■□□□ 1.68
LIMS2-218ENST00000582671 CC2D1BQ5T0F9 858 aaKnown RBP25.56■■□□□ 1.68
LIMS2-218ENST00000582671 ANO8Q9HCE9 1232 aaPredicted RBP25.56■■□□□ 1.68
LIMS2-218ENST00000582671 CYP27B1O15528 508 aa25.55■■□□□ 1.68
LIMS2-218ENST00000582671 PCDH11XQ9BZA7 1347 aa25.55■■□□□ 1.68
LIMS2-218ENST00000582671 PCDH11YQ9BZA8 1340 aa25.55■■□□□ 1.68
LIMS2-218ENST00000582671 PAPPAQ13219 1627 aa25.55■■□□□ 1.68
LIMS2-218ENST00000582671 SYTL4Q96C24 671 aaPredicted RBP25.54■■□□□ 1.68
LIMS2-218ENST00000582671 IGSF1Q8N6C5 1336 aa25.54■■□□□ 1.68
LIMS2-218ENST00000582671 CASZ1Q86V15 1759 aa25.53■■□□□ 1.68
LIMS2-218ENST00000582671 NPC1L1Q9UHC9 1359 aa25.5■■□□□ 1.67
LIMS2-218ENST00000582671 MTHFSP49914 203 aa25.49■■□□□ 1.67
LIMS2-218ENST00000582671 CNGB1Q14028 1251 aaPredicted RBP25.49■■□□□ 1.67
LIMS2-218ENST00000582671 LRRC4BQ9NT99 713 aa25.48■■□□□ 1.67
LIMS2-218ENST00000582671 SPG7Q9UQ90 795 aa25.48■■□□□ 1.67
LIMS2-218ENST00000582671 IL13P35225 146 aa25.47■■□□□ 1.67
LIMS2-218ENST00000582671 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.47■■□□□ 1.67
LIMS2-218ENST00000582671 NKX1-1Q15270 411 aaPredicted RBP25.46■■□□□ 1.67
LIMS2-218ENST00000582671 AEBP1Q8IUX7 1158 aa25.46■■□□□ 1.67
LIMS2-218ENST00000582671 TUBGCP6Q96RT7 1819 aa25.45■■□□□ 1.66
LIMS2-218ENST00000582671 PDGFDQ9GZP0 370 aaPredicted RBP25.45■■□□□ 1.66
LIMS2-218ENST00000582671 SLC15A2Q16348 729 aa25.44■■□□□ 1.66
LIMS2-218ENST00000582671 STK32BQ9NY57 414 aa25.44■■□□□ 1.66
LIMS2-218ENST00000582671 TAF1LQ8IZX4 1826 aa25.43■■□□□ 1.66
LIMS2-218ENST00000582671 PHKG2P15735 406 aa25.43■■□□□ 1.66
LIMS2-218ENST00000582671 KCNQ4P56696 695 aa25.43■■□□□ 1.66
LIMS2-218ENST00000582671 QSER1Q2KHR3 1735 aa25.43■■□□□ 1.66
LIMS2-218ENST00000582671 PLEKHG2Q9H7P9 1386 aa25.43■■□□□ 1.66
LIMS2-218ENST00000582671 MPRIPQ6WCQ1 1025 aa25.42■■□□□ 1.66
LIMS2-218ENST00000582671 SULT6B1Q6IMI4 303 aa25.41■■□□□ 1.66
LIMS2-218ENST00000582671 IFNL2Q8IZJ0 200 aa25.41■■□□□ 1.66
LIMS2-218ENST00000582671 KDRP35968 1356 aa25.41■■□□□ 1.66
LIMS2-218ENST00000582671 VIRMAQ69YN4 1812 aaKnown RBP25.4■■□□□ 1.66
LIMS2-218ENST00000582671 SRCAPQ6ZRS2 3230 aa25.4■■□□□ 1.66
LIMS2-218ENST00000582671 ZNF827Q17R98 1081 aa25.4■■□□□ 1.66
LIMS2-218ENST00000582671 SLC27A3Q5K4L6 730 aa25.4■■□□□ 1.66
LIMS2-218ENST00000582671 COL3A1P02461 1466 aaPredicted RBP25.4■■□□□ 1.66
LIMS2-218ENST00000582671 C5P01031 1676 aa25.39■■□□□ 1.66
LIMS2-218ENST00000582671 PLEKHO1Q53GL0 409 aaPredicted RBP25.37■■□□□ 1.65
LIMS2-218ENST00000582671 PIGBQ92521 554 aa25.37■■□□□ 1.65
LIMS2-218ENST00000582671 AKT1S1Q96B36 256 aa25.36■■□□□ 1.65
LIMS2-218ENST00000582671 CCNL1Q9UK58 526 aaPredicted RBP25.35■■□□□ 1.65
LIMS2-218ENST00000582671 SCN11AQ9UI33 1791 aa25.35■■□□□ 1.65
LIMS2-218ENST00000582671 PALLDQ8WX93 1383 aa25.34■■□□□ 1.65
LIMS2-218ENST00000582671 DIAPH1O60610 1272 aaKnown RBP25.34■■□□□ 1.65
LIMS2-218ENST00000582671 SPON1Q9HCB6 807 aa25.34■■□□□ 1.65
LIMS2-218ENST00000582671 HMOX1P09601 288 aa25.33■■□□□ 1.65
LIMS2-218ENST00000582671 AMOTQ4VCS5 1084 aa25.33■■□□□ 1.65
LIMS2-218ENST00000582671 ZNF530Q6P9A1 599 aaPredicted RBP25.33■■□□□ 1.65
LIMS2-218ENST00000582671 KDM6AO15550 1401 aaPredicted RBP25.32■■□□□ 1.64
LIMS2-218ENST00000582671 ZBTB7AO95365 584 aa25.32■■□□□ 1.64
LIMS2-218ENST00000582671 TMOD3Q9NYL9 352 aa25.31■■□□□ 1.64
LIMS2-218ENST00000582671 DCAF5Q96JK2 942 aa25.29■■□□□ 1.64
LIMS2-218ENST00000582671 PPP2R1AP30153 589 aa25.28■■□□□ 1.64
LIMS2-218ENST00000582671 SMARCC1Q92922 1105 aaPredicted RBP25.28■■□□□ 1.64
LIMS2-218ENST00000582671 ASAP1Q9ULH1 1129 aa25.28■■□□□ 1.64
LIMS2-218ENST00000582671 ATF5Q9Y2D1 282 aaPredicted RBP25.28■■□□□ 1.64
LIMS2-218ENST00000582671 PNPLA7Q6ZV29 1317 aa25.28■■□□□ 1.64
LIMS2-218ENST00000582671 C4BP0C0L5 1744 aa25.28■■□□□ 1.64
LIMS2-218ENST00000582671 COL24A1Q17RW2 1714 aa25.28■■□□□ 1.64
LIMS2-218ENST00000582671 HSP90AB1P08238 724 aaKnown RBP25.27■■□□□ 1.64
LIMS2-218ENST00000582671 ERVV-2B6SEH9 535 aa25.26■■□□□ 1.63
LIMS2-218ENST00000582671 PTGER2P43116 358 aa25.26■■□□□ 1.63
LIMS2-218ENST00000582671 ATG3Q9NT62 314 aa25.26■■□□□ 1.63
LIMS2-218ENST00000582671 UBR3Q6ZT12 1888 aa25.26■■□□□ 1.63
LIMS2-218ENST00000582671 C1orf141Q5JVX7 400 aa25.25■■□□□ 1.63
LIMS2-218ENST00000582671 TFCP2L1Q9NZI6 479 aa25.25■■□□□ 1.63
LIMS2-218ENST00000582671 U2SURPO15042 1029 aaKnown RBP25.24■■□□□ 1.63
LIMS2-218ENST00000582671 MTFR1LQ9H019 292 aa25.24■■□□□ 1.63
LIMS2-218ENST00000582671 ADAMTS7Q9UKP4 1686 aa25.23■■□□□ 1.63
LIMS2-218ENST00000582671 ZNF831Q5JPB2 1677 aa25.23■■□□□ 1.63
LIMS2-218ENST00000582671 SGIP1Q9BQI5 828 aa25.22■■□□□ 1.63
LIMS2-218ENST00000582671 LOC102724428A0A0B4J2F2 783 aa25.21■■□□□ 1.63
LIMS2-218ENST00000582671 SIK1P57059 783 aa25.21■■□□□ 1.63
LIMS2-218ENST00000582671 CABP4P57796 275 aa25.21■■□□□ 1.63
LIMS2-218ENST00000582671 MTHFSDQ2M296 383 aaKnown RBP25.21■■□□□ 1.63
LIMS2-218ENST00000582671 AKAP4Q5JQC9 854 aa25.21■■□□□ 1.63
LIMS2-218ENST00000582671 PPP1R1BQ9UD71 204 aaPredicted RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms