RNA–Protein interactions for RNA: ENST00000582648.5

ERBB2-211, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-211ENST00000582648 EIF4A2Q14240 407 aaKnown RBP24.55■■□□□ 1.52
ERBB2-211ENST00000582648 NUP188Q5SRE5 1749 aa24.55■■□□□ 1.52
ERBB2-211ENST00000582648 TATP17735 454 aaPredicted RBP24.54■■□□□ 1.52
ERBB2-211ENST00000582648 CAMKK2Q96RR4 588 aa24.54■■□□□ 1.52
ERBB2-211ENST00000582648 NCAPD2Q15021 1401 aa24.53■■□□□ 1.52
ERBB2-211ENST00000582648 RGPD3A6NKT7 1758 aaPredicted RBP24.53■■□□□ 1.52
ERBB2-211ENST00000582648 RGPD4Q7Z3J3 1758 aa24.53■■□□□ 1.52
ERBB2-211ENST00000582648 ZCRB1Q8TBF4 217 aaKnown RBP24.53■■□□□ 1.52
ERBB2-211ENST00000582648 EYA1Q99502 592 aa24.53■■□□□ 1.52
ERBB2-211ENST00000582648 BCL11BQ9C0K0 894 aaPredicted RBP24.53■■□□□ 1.52
ERBB2-211ENST00000582648 PKD1L3Q7Z443 1732 aa24.52■■□□□ 1.52
ERBB2-211ENST00000582648 KCNQ2O43526 872 aa24.52■■□□□ 1.52
ERBB2-211ENST00000582648 BTAF1O14981 1849 aa24.51■■□□□ 1.51
ERBB2-211ENST00000582648 PARD3Q8TEW0 1356 aa24.51■■□□□ 1.51
ERBB2-211ENST00000582648 NPC1L1Q9UHC9 1359 aa24.48■■□□□ 1.51
ERBB2-211ENST00000582648 PSDA5PKW4 1024 aaPredicted RBP24.47■■□□□ 1.51
ERBB2-211ENST00000582648 PCDH11XQ9BZA7 1347 aa24.46■■□□□ 1.51
ERBB2-211ENST00000582648 PCDH11YQ9BZA8 1340 aa24.46■■□□□ 1.51
ERBB2-211ENST00000582648 IGSF1Q8N6C5 1336 aa24.45■■□□□ 1.5
ERBB2-211ENST00000582648 SYTL4Q96C24 671 aaPredicted RBP24.45■■□□□ 1.5
ERBB2-211ENST00000582648 MTHFSP49914 203 aa24.44■■□□□ 1.5
ERBB2-211ENST00000582648 TOGARAM1Q9Y4F4 1720 aa24.43■■□□□ 1.5
ERBB2-211ENST00000582648 PLSCR1O15162 318 aa24.42■■□□□ 1.5
ERBB2-211ENST00000582648 R3HDM1Q15032 1099 aaKnown RBP24.42■■□□□ 1.5
ERBB2-211ENST00000582648 CYP27B1O15528 508 aa24.41■■□□□ 1.5
ERBB2-211ENST00000582648 PRIM1P49642 420 aaKnown RBP24.4■■□□□ 1.5
ERBB2-211ENST00000582648 AEBP1Q8IUX7 1158 aa24.4■■□□□ 1.5
ERBB2-211ENST00000582648 IL13P35225 146 aa24.39■■□□□ 1.49
ERBB2-211ENST00000582648 SPG7Q9UQ90 795 aa24.39■■□□□ 1.49
ERBB2-211ENST00000582648 TXNRD1Q16881 649 aa24.37■■□□□ 1.49
ERBB2-211ENST00000582648 ITGB4P16144 1822 aa24.37■■□□□ 1.49
ERBB2-211ENST00000582648 COL3A1P02461 1466 aaPredicted RBP24.37■■□□□ 1.49
ERBB2-211ENST00000582648 SULT6B1Q6IMI4 303 aa24.36■■□□□ 1.49
ERBB2-211ENST00000582648 PROM2Q8N271 834 aa24.36■■□□□ 1.49
ERBB2-211ENST00000582648 NBPF14Q5TI25 921 aa24.35■■□□□ 1.49
ERBB2-211ENST00000582648 ZEB1P37275 1124 aaPredicted RBP24.34■■□□□ 1.49
ERBB2-211ENST00000582648 ANO8Q9HCE9 1232 aaPredicted RBP24.34■■□□□ 1.49
ERBB2-211ENST00000582648 DIAPH1O60610 1272 aaKnown RBP24.33■■□□□ 1.49
ERBB2-211ENST00000582648 KDRP35968 1356 aa24.32■■□□□ 1.48
ERBB2-211ENST00000582648 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.32■■□□□ 1.48
ERBB2-211ENST00000582648 LY75O60449 1722 aa24.32■■□□□ 1.48
ERBB2-211ENST00000582648 HMOX1P09601 288 aa24.31■■□□□ 1.48
ERBB2-211ENST00000582648 PHKG2P15735 406 aa24.31■■□□□ 1.48
ERBB2-211ENST00000582648 PAPPAQ13219 1627 aa24.31■■□□□ 1.48
ERBB2-211ENST00000582648 PLEKHG2Q9H7P9 1386 aa24.3■■□□□ 1.48
ERBB2-211ENST00000582648 MPRIPQ6WCQ1 1025 aa24.3■■□□□ 1.48
ERBB2-211ENST00000582648 IFNL2Q8IZJ0 200 aa24.3■■□□□ 1.48
ERBB2-211ENST00000582648 PPP2R1AP30153 589 aa24.29■■□□□ 1.48
ERBB2-211ENST00000582648 DDX10Q13206 875 aaKnown RBP24.29■■□□□ 1.48
ERBB2-211ENST00000582648 PLEKHO1Q53GL0 409 aaPredicted RBP24.29■■□□□ 1.48
ERBB2-211ENST00000582648 ZNF530Q6P9A1 599 aaPredicted RBP24.29■■□□□ 1.48
ERBB2-211ENST00000582648 U2SURPO15042 1029 aaKnown RBP24.28■■□□□ 1.48
ERBB2-211ENST00000582648 NKX1-1Q15270 411 aaPredicted RBP24.27■■□□□ 1.48
ERBB2-211ENST00000582648 LRP5O75197 1615 aa24.27■■□□□ 1.48
ERBB2-211ENST00000582648 KCNQ4P56696 695 aa24.26■■□□□ 1.47
ERBB2-211ENST00000582648 LRRC4BQ9NT99 713 aa24.26■■□□□ 1.47
ERBB2-211ENST00000582648 STK32BQ9NY57 414 aa24.26■■□□□ 1.47
ERBB2-211ENST00000582648 AMOTQ4VCS5 1084 aa24.25■■□□□ 1.47
ERBB2-211ENST00000582648 CFAP53Q96M91 514 aa24.25■■□□□ 1.47
ERBB2-211ENST00000582648 SRCAPQ6ZRS2 3230 aa24.24■■□□□ 1.47
ERBB2-211ENST00000582648 CASZ1Q86V15 1759 aa24.24■■□□□ 1.47
ERBB2-211ENST00000582648 C1orf141Q5JVX7 400 aa24.23■■□□□ 1.47
ERBB2-211ENST00000582648 PALLDQ8WX93 1383 aa24.23■■□□□ 1.47
ERBB2-211ENST00000582648 KDM6AO15550 1401 aaPredicted RBP24.23■■□□□ 1.47
ERBB2-211ENST00000582648 PIGBQ92521 554 aa24.22■■□□□ 1.47
ERBB2-211ENST00000582648 TMOD3Q9NYL9 352 aa24.22■■□□□ 1.47
ERBB2-211ENST00000582648 CCNL1Q9UK58 526 aaPredicted RBP24.22■■□□□ 1.47
ERBB2-211ENST00000582648 C5P01031 1676 aa24.21■■□□□ 1.47
ERBB2-211ENST00000582648 SLC15A2Q16348 729 aa24.21■■□□□ 1.47
ERBB2-211ENST00000582648 SLC27A3Q5K4L6 730 aa24.21■■□□□ 1.47
ERBB2-211ENST00000582648 VIRMAQ69YN4 1812 aaKnown RBP24.21■■□□□ 1.47
ERBB2-211ENST00000582648 TUBGCP6Q96RT7 1819 aa24.21■■□□□ 1.47
ERBB2-211ENST00000582648 HSP90AB1P08238 724 aaKnown RBP24.2■■□□□ 1.46
ERBB2-211ENST00000582648 ZNF827Q17R98 1081 aa24.2■■□□□ 1.46
ERBB2-211ENST00000582648 SCN11AQ9UI33 1791 aa24.19■■□□□ 1.46
ERBB2-211ENST00000582648 DCAF5Q96JK2 942 aa24.19■■□□□ 1.46
ERBB2-211ENST00000582648 PDGFDQ9GZP0 370 aaPredicted RBP24.19■■□□□ 1.46
ERBB2-211ENST00000582648 TAF1LQ8IZX4 1826 aa24.17■■□□□ 1.46
ERBB2-211ENST00000582648 MTHFSDQ2M296 383 aaKnown RBP24.15■■□□□ 1.46
ERBB2-211ENST00000582648 SMARCC1Q92922 1105 aaPredicted RBP24.15■■□□□ 1.46
ERBB2-211ENST00000582648 ASAP1Q9ULH1 1129 aa24.15■■□□□ 1.46
ERBB2-211ENST00000582648 NUDCQ9Y266 331 aa24.15■■□□□ 1.46
ERBB2-211ENST00000582648 QSER1Q2KHR3 1735 aa24.14■■□□□ 1.45
ERBB2-211ENST00000582648 AKAP4Q5JQC9 854 aa24.14■■□□□ 1.45
ERBB2-211ENST00000582648 ERVV-2B6SEH9 535 aa24.13■■□□□ 1.45
ERBB2-211ENST00000582648 U2AF1L5P0DN76 240 aaPredicted RBP24.13■■□□□ 1.45
ERBB2-211ENST00000582648 CABP4P57796 275 aa24.13■■□□□ 1.45
ERBB2-211ENST00000582648 U2AF1Q01081 240 aaKnown RBP eCLIP24.13■■□□□ 1.45
ERBB2-211ENST00000582648 AKT1S1Q96B36 256 aa24.13■■□□□ 1.45
ERBB2-211ENST00000582648 ZBTB7AO95365 584 aa24.12■■□□□ 1.45
ERBB2-211ENST00000582648 PRKAR2BP31323 418 aa24.12■■□□□ 1.45
ERBB2-211ENST00000582648 C4BP0C0L5 1744 aa24.11■■□□□ 1.45
ERBB2-211ENST00000582648 RSPH6AQ9H0K4 717 aa24.11■■□□□ 1.45
ERBB2-211ENST00000582648 ATG3Q9NT62 314 aa24.11■■□□□ 1.45
ERBB2-211ENST00000582648 RALBP1Q15311 655 aa24.1■■□□□ 1.45
ERBB2-211ENST00000582648 TFCP2L1Q9NZI6 479 aa24.1■■□□□ 1.45
ERBB2-211ENST00000582648 ADAMTS7Q9UKP4 1686 aa24.09■■□□□ 1.45
ERBB2-211ENST00000582648 LOC102724428A0A0B4J2F2 783 aa24.09■■□□□ 1.45
ERBB2-211ENST00000582648 SIK1P57059 783 aa24.09■■□□□ 1.45
ERBB2-211ENST00000582648 MRC1P22897 1456 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms