RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 BRINP3Q76B58 766 aa15.09■□□□□ 0.01
SS18-221ENST00000582448 NLRP7Q8WX94 980 aa15.09■□□□□ 0.01
SS18-221ENST00000582448 NCOA3Q9Y6Q9 1424 aa15.09■□□□□ 0.01
SS18-221ENST00000582448 RPRD2Q5VT52 1461 aaKnown RBP15.08■□□□□ 0.01
SS18-221ENST00000582448 CHD2O14647 1828 aaKnown RBP15.08■□□□□ 0.01
SS18-221ENST00000582448 ZEB1P37275 1124 aaPredicted RBP15.08■□□□□ 0
SS18-221ENST00000582448 MYO5BQ9ULV0 1848 aa15.08■□□□□ 0
SS18-221ENST00000582448 ADGRL2O95490 1459 aa15.08■□□□□ 0
SS18-221ENST00000582448 COL16A1Q07092 1604 aaPredicted RBP15.07■□□□□ 0
SS18-221ENST00000582448 ITGBL1O95965 494 aaPredicted RBP15.07■□□□□ 0
SS18-221ENST00000582448 ITGAEP38570 1179 aa15.07■□□□□ 0
SS18-221ENST00000582448 ADAMTS13Q76LX8 1427 aa15.07■□□□□ 0
SS18-221ENST00000582448 AFF2P51816 1311 aa15.06■□□□□ 0
SS18-221ENST00000582448 TMEM131LA2VDJ0 1609 aa15.06■□□□□ 0
SS18-221ENST00000582448 GCC2Q8IWJ2 1684 aa15.06■□□□□ 0
SS18-221ENST00000582448 MAP2K5Q13163 448 aa15.05■□□□□ -0
SS18-221ENST00000582448 ZNF326Q5BKZ1 582 aaKnown RBP15.05■□□□□ -0
SS18-221ENST00000582448 DDX17Q92841 729 aaKnown RBP15.05■□□□□ -0
SS18-221ENST00000582448 C8orf37Q96NL8 207 aa15.05■□□□□ -0
SS18-221ENST00000582448 IFFO2Q5TF58 517 aa15.04■□□□□ -0
SS18-221ENST00000582448 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.03■□□□□ -0
SS18-221ENST00000582448 PTPRUQ92729 1446 aa15.03■□□□□ -0
SS18-221ENST00000582448 PIK3R4Q99570 1358 aa15.03■□□□□ -0
SS18-221ENST00000582448 QTRT2Q9H974 415 aaKnown RBP15.03■□□□□ -0
SS18-221ENST00000582448 NUP155O75694 1391 aa15.02■□□□□ -0
SS18-221ENST00000582448 IRF6O14896 467 aa15.02■□□□□ -0
SS18-221ENST00000582448 SLC10A3P09131 477 aa15.02■□□□□ -0
SS18-221ENST00000582448 CCER1Q8TC90 406 aaPredicted RBP15.02■□□□□ -0
SS18-221ENST00000582448 LRRC59Q96AG4 307 aaKnown RBP15.02■□□□□ -0
SS18-221ENST00000582448 SLC4A3P48751 1232 aa15.01□□□□□ -0.01
SS18-221ENST00000582448 AHDC1Q5TGY3 1603 aaPredicted RBP15□□□□□ -0.01
SS18-221ENST00000582448 ADAMTS2O95450 1211 aa15□□□□□ -0.01
SS18-221ENST00000582448 TJAP1Q5JTD0 557 aa15□□□□□ -0.01
SS18-221ENST00000582448 ZC3H15Q8WU90 426 aaKnown RBP15□□□□□ -0.01
SS18-221ENST00000582448 NECTIN2Q92692 538 aa14.99□□□□□ -0.01
SS18-221ENST00000582448 MINK1Q8N4C8 1332 aaPredicted RBP14.98□□□□□ -0.01
SS18-221ENST00000582448 TRPM2O94759 1503 aa14.98□□□□□ -0.01
SS18-221ENST00000582448 KCNC4Q03721 635 aa14.98□□□□□ -0.01
SS18-221ENST00000582448 NGLY1Q96IV0 654 aa14.98□□□□□ -0.01
SS18-221ENST00000582448 MTRQ99707 1265 aa14.98□□□□□ -0.01
SS18-221ENST00000582448 DAXXQ9UER7 740 aaPredicted RBP14.98□□□□□ -0.01
SS18-221ENST00000582448 DIP2AQ14689 1571 aa14.98□□□□□ -0.01
SS18-221ENST00000582448 SHPRHQ149N8 1683 aa14.97□□□□□ -0.01
SS18-221ENST00000582448 RBM6P78332 1123 aaKnown RBP14.97□□□□□ -0.01
SS18-221ENST00000582448 CCDC102AQ96A19 550 aa14.97□□□□□ -0.01
SS18-221ENST00000582448 E9PCH4 1651 aa14.96□□□□□ -0.01
SS18-221ENST00000582448 METP08581 1390 aa14.96□□□□□ -0.02
SS18-221ENST00000582448 MST1RQ04912 1400 aa14.95□□□□□ -0.02
SS18-221ENST00000582448 SETD5Q9C0A6 1442 aa14.95□□□□□ -0.02
SS18-221ENST00000582448 ZMYND10O75800 440 aa14.95□□□□□ -0.02
SS18-221ENST00000582448 ASXL1Q8IXJ9 1541 aa14.95□□□□□ -0.02
SS18-221ENST00000582448 A0A0G2JS52 829 aa14.94□□□□□ -0.02
SS18-221ENST00000582448 CFHP08603 1231 aa14.94□□□□□ -0.02
SS18-221ENST00000582448 BARGINQ6ZT62 677 aa14.94□□□□□ -0.02
SS18-221ENST00000582448 ZNF516Q92618 1163 aa14.94□□□□□ -0.02
SS18-221ENST00000582448 UNC13BO14795 1591 aa14.94□□□□□ -0.02
SS18-221ENST00000582448 DCCP43146 1447 aa14.93□□□□□ -0.02
SS18-221ENST00000582448 PNPLA6Q8IY17 1366 aa14.93□□□□□ -0.02
SS18-221ENST00000582448 IL21Q9HBE4 155 aa14.92□□□□□ -0.02
SS18-221ENST00000582448 USP21Q9UK80 565 aa14.92□□□□□ -0.02
SS18-221ENST00000582448 ROCK1Q13464 1354 aa14.92□□□□□ -0.02
SS18-221ENST00000582448 CDK12Q9NYV4 1490 aaPredicted RBP14.92□□□□□ -0.02
SS18-221ENST00000582448 RGS12O14924 1447 aa14.92□□□□□ -0.02
SS18-221ENST00000582448 COPS2P61201 443 aa14.91□□□□□ -0.02
SS18-221ENST00000582448 ORAI2Q96SN7 254 aa14.91□□□□□ -0.02
SS18-221ENST00000582448 DDX11L8A8MPP1 907 aa14.9□□□□□ -0.02
SS18-221ENST00000582448 IQGAP3Q86VI3 1631 aa14.89□□□□□ -0.03
SS18-221ENST00000582448 ACTN4O43707 911 aaKnown RBP14.89□□□□□ -0.03
SS18-221ENST00000582448 KMT5BQ4FZB7 885 aa14.89□□□□□ -0.03
SS18-221ENST00000582448 PCDHB3Q9Y5E6 796 aa14.89□□□□□ -0.03
SS18-221ENST00000582448 BLOC1S3Q6QNY0 202 aa14.88□□□□□ -0.03
SS18-221ENST00000582448 PRR14Q9BWN1 585 aa14.88□□□□□ -0.03
SS18-221ENST00000582448 TRPC5Q9UL62 973 aaPredicted RBP14.88□□□□□ -0.03
SS18-221ENST00000582448 ADGRL3Q9HAR2 1447 aa14.88□□□□□ -0.03
SS18-221ENST00000582448 MDM2Q00987 491 aaPredicted RBP14.87□□□□□ -0.03
SS18-221ENST00000582448 KRI1Q8N9T8 703 aaKnown RBP14.87□□□□□ -0.03
SS18-221ENST00000582448 RDH13Q8NBN7 331 aa14.87□□□□□ -0.03
SS18-221ENST00000582448 C1orf167Q5SNV9 1468 aa14.87□□□□□ -0.03
SS18-221ENST00000582448 NRXN3Q9Y4C0 1643 aa14.86□□□□□ -0.03
SS18-221ENST00000582448 XRN1Q8IZH2 1706 aaKnown RBP14.86□□□□□ -0.03
SS18-221ENST00000582448 SETBP1Q9Y6X0 1596 aa14.85□□□□□ -0.03
SS18-221ENST00000582448 NKX2-3Q8TAU0 364 aa14.85□□□□□ -0.03
SS18-221ENST00000582448 ATAD2Q6PL18 1390 aa14.85□□□□□ -0.03
SS18-221ENST00000582448 NHSL1Q5SYE7 1610 aa14.84□□□□□ -0.03
SS18-221ENST00000582448 ESCO1Q5FWF5 840 aa14.84□□□□□ -0.03
SS18-221ENST00000582448 XPCQ01831 940 aaPredicted RBP14.83□□□□□ -0.04
SS18-221ENST00000582448 SOS2Q07890 1332 aaPredicted RBP14.83□□□□□ -0.04
SS18-221ENST00000582448 SULF1Q8IWU6 871 aa14.82□□□□□ -0.04
SS18-221ENST00000582448 FNBP4Q8N3X1 1017 aaPredicted RBP14.82□□□□□ -0.04
SS18-221ENST00000582448 ROBO2Q9HCK4 1378 aa14.82□□□□□ -0.04
SS18-221ENST00000582448 ZPR1O75312 459 aa14.81□□□□□ -0.04
SS18-221ENST00000582448 FOXO3O43524 673 aa14.8□□□□□ -0.04
SS18-221ENST00000582448 GCGRP47871 477 aa14.8□□□□□ -0.04
SS18-221ENST00000582448 PUS10Q3MIT2 529 aaKnown RBP14.8□□□□□ -0.04
SS18-221ENST00000582448 TMUB1Q9BVT8 246 aa14.8□□□□□ -0.04
SS18-221ENST00000582448 REPIN1Q9BWE0 567 aaKnown RBP14.8□□□□□ -0.04
SS18-221ENST00000582448 CLSPNQ9HAW4 1339 aa14.8□□□□□ -0.04
SS18-221ENST00000582448 SPHKAPQ2M3C7 1700 aa14.8□□□□□ -0.04
SS18-221ENST00000582448 NEXMIFQ5QGS0 1516 aa14.79□□□□□ -0.04
SS18-221ENST00000582448 NALCNQ8IZF0 1738 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms