RNA–Protein interactions for RNA: ENST00000581963.1

CDK12-207, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-207ENST00000581963 UBR3Q6ZT12 1888 aa8.76□□□□□ -1.01
CDK12-207ENST00000581963 ANKRD36BQ8N2N9 1353 aa8.75□□□□□ -1.01
CDK12-207ENST00000581963 POLD1P28340 1107 aa8.75□□□□□ -1.01
CDK12-207ENST00000581963 NEUROD1Q13562 356 aa8.75□□□□□ -1.01
CDK12-207ENST00000581963 HDGFL2Q7Z4V5 671 aaPredicted RBP8.75□□□□□ -1.01
CDK12-207ENST00000581963 TMC1Q8TDI8 760 aa8.75□□□□□ -1.01
CDK12-207ENST00000581963 IP6K1Q92551 441 aa8.75□□□□□ -1.01
CDK12-207ENST00000581963 GIGYF1O75420 1035 aaPredicted RBP8.74□□□□□ -1.01
CDK12-207ENST00000581963 PRIM1P49642 420 aaKnown RBP8.74□□□□□ -1.01
CDK12-207ENST00000581963 PELP1Q8IZL8 1130 aaKnown RBP8.74□□□□□ -1.01
CDK12-207ENST00000581963 LTV1Q96GA3 475 aaPredicted RBP8.74□□□□□ -1.01
CDK12-207ENST00000581963 TFCP2L1Q9NZI6 479 aa8.74□□□□□ -1.01
CDK12-207ENST00000581963 MAP3K19Q56UN5 1328 aa8.74□□□□□ -1.01
CDK12-207ENST00000581963 PKD1L3Q7Z443 1732 aa8.74□□□□□ -1.01
CDK12-207ENST00000581963 MAP2P11137 1827 aaKnown RBP8.73□□□□□ -1.01
CDK12-207ENST00000581963 YBX3P16989 372 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDK12-207ENST00000581963 SYTL4Q96C24 671 aaPredicted RBP8.73□□□□□ -1.01
CDK12-207ENST00000581963 CARD11Q9BXL7 1154 aa8.73□□□□□ -1.01
CDK12-207ENST00000581963 TERF2IPQ9NYB0 399 aa8.73□□□□□ -1.01
CDK12-207ENST00000581963 C4BP0C0L5 1744 aa8.73□□□□□ -1.01
CDK12-207ENST00000581963 FBLN1P23142 703 aa8.72□□□□□ -1.01
CDK12-207ENST00000581963 HOXC9P31274 260 aa8.72□□□□□ -1.01
CDK12-207ENST00000581963 ATP10DQ9P241 1426 aa8.71□□□□□ -1.01
CDK12-207ENST00000581963 COL23A1Q86Y22 540 aaPredicted RBP8.71□□□□□ -1.02
CDK12-207ENST00000581963 ZCRB1Q8TBF4 217 aaKnown RBP8.71□□□□□ -1.02
CDK12-207ENST00000581963 PUS7Q96PZ0 661 aaKnown RBP8.71□□□□□ -1.02
CDK12-207ENST00000581963 CCNL1Q9UK58 526 aaPredicted RBP8.71□□□□□ -1.02
CDK12-207ENST00000581963 RTL1A6NKG5 1358 aa8.71□□□□□ -1.02
CDK12-207ENST00000581963 ANKRD26Q9UPS8 1709 aa8.71□□□□□ -1.02
CDK12-207ENST00000581963 MSL1Q68DK7 614 aa8.7□□□□□ -1.02
CDK12-207ENST00000581963 COG3Q96JB2 828 aa8.7□□□□□ -1.02
CDK12-207ENST00000581963 KIAA1551Q9HCM1 1747 aa8.7□□□□□ -1.02
CDK12-207ENST00000581963 KIF13BQ9NQT8 1826 aa8.7□□□□□ -1.02
CDK12-207ENST00000581963 ADCY9O60503 1353 aa8.7□□□□□ -1.02
CDK12-207ENST00000581963 USP47Q96K76 1375 aa8.7□□□□□ -1.02
CDK12-207ENST00000581963 GRIN3BO60391 1043 aa8.69□□□□□ -1.02
CDK12-207ENST00000581963 AMPHP49418 695 aa8.69□□□□□ -1.02
CDK12-207ENST00000581963 NBPF6Q5VWK0 638 aa8.69□□□□□ -1.02
CDK12-207ENST00000581963 USHBP1Q8N6Y0 703 aa8.69□□□□□ -1.02
CDK12-207ENST00000581963 NBPF4Q96M43 638 aa8.69□□□□□ -1.02
CDK12-207ENST00000581963 TESK2Q96S53 571 aa8.69□□□□□ -1.02
CDK12-207ENST00000581963 MSH5O43196 834 aa8.68□□□□□ -1.02
CDK12-207ENST00000581963 RRS1Q15050 365 aaKnown RBP8.68□□□□□ -1.02
CDK12-207ENST00000581963 IFFO2Q5TF58 517 aa8.68□□□□□ -1.02
CDK12-207ENST00000581963 CICQ96RK0 1608 aaPredicted RBP8.68□□□□□ -1.02
CDK12-207ENST00000581963 N4BP2Q86UW6 1770 aaPredicted RBP8.68□□□□□ -1.02
CDK12-207ENST00000581963 BRCA1P38398 1863 aaKnown RBP8.68□□□□□ -1.02
CDK12-207ENST00000581963 CGNL1Q0VF96 1302 aa8.67□□□□□ -1.02
CDK12-207ENST00000581963 SMG6Q86US8 1419 aaKnown RBP8.67□□□□□ -1.02
CDK12-207ENST00000581963 PALLDQ8WX93 1383 aa8.67□□□□□ -1.02
CDK12-207ENST00000581963 NCAPD2Q15021 1401 aa8.66□□□□□ -1.02
CDK12-207ENST00000581963 TONSLQ96HA7 1378 aa8.66□□□□□ -1.02
CDK12-207ENST00000581963 PCDH11XQ9BZA7 1347 aa8.66□□□□□ -1.02
CDK12-207ENST00000581963 PCDH11YQ9BZA8 1340 aa8.66□□□□□ -1.02
CDK12-207ENST00000581963 ST20-MTHFSA0A0A6YYL1 179 aa8.66□□□□□ -1.02
CDK12-207ENST00000581963 AMIGO3Q86WK7 504 aa8.66□□□□□ -1.02
CDK12-207ENST00000581963 PIAS4Q8N2W9 510 aaPredicted RBP8.66□□□□□ -1.02
CDK12-207ENST00000581963 CD2APQ9Y5K6 639 aa8.66□□□□□ -1.02
CDK12-207ENST00000581963 COL5A3P25940 1745 aaPredicted RBP8.66□□□□□ -1.02
CDK12-207ENST00000581963 INSRP06213 1382 aa8.65□□□□□ -1.02
CDK12-207ENST00000581963 FLT4P35916 1363 aa8.65□□□□□ -1.02
CDK12-207ENST00000581963 FYB1O15117 783 aa8.65□□□□□ -1.02
CDK12-207ENST00000581963 CYP27B1O15528 508 aa8.65□□□□□ -1.02
CDK12-207ENST00000581963 TATP17735 454 aaPredicted RBP8.65□□□□□ -1.02
CDK12-207ENST00000581963 HSP90AB2PQ58FF8 381 aa8.65□□□□□ -1.02
CDK12-207ENST00000581963 FLAD1Q8NFF5 587 aa8.65□□□□□ -1.02
CDK12-207ENST00000581963 RAPGEF4Q8WZA2 1011 aa8.65□□□□□ -1.02
CDK12-207ENST00000581963 GGNBP2Q9H3C7 697 aa8.65□□□□□ -1.02
CDK12-207ENST00000581963 ARFGEF1Q9Y6D6 1849 aa8.64□□□□□ -1.03
CDK12-207ENST00000581963 C4AP0C0L4 1744 aa8.64□□□□□ -1.03
CDK12-207ENST00000581963 ADRA2BP18089 450 aa8.64□□□□□ -1.03
CDK12-207ENST00000581963 MPRIPQ6WCQ1 1025 aa8.64□□□□□ -1.03
CDK12-207ENST00000581963 SMIM5Q71RC9 77 aa8.64□□□□□ -1.03
CDK12-207ENST00000581963 GPBP1L1Q9HC44 474 aaPredicted RBP8.64□□□□□ -1.03
CDK12-207ENST00000581963 ZNF831Q5JPB2 1677 aa8.64□□□□□ -1.03
CDK12-207ENST00000581963 MYH14Q7Z406 1995 aaKnown RBP8.64□□□□□ -1.03
CDK12-207ENST00000581963 KIF24Q5T7B8 1368 aa8.63□□□□□ -1.03
CDK12-207ENST00000581963 IGSF1Q8N6C5 1336 aa8.63□□□□□ -1.03
CDK12-207ENST00000581963 ZNF526Q8TF50 670 aaPredicted RBP8.63□□□□□ -1.03
CDK12-207ENST00000581963 WWC3Q9ULE0 1092 aa8.63□□□□□ -1.03
CDK12-207ENST00000581963 NSD3Q9BZ95 1437 aa8.63□□□□□ -1.03
CDK12-207ENST00000581963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.62□□□□□ -1.03
CDK12-207ENST00000581963 PHF14O94880 888 aa8.62□□□□□ -1.03
CDK12-207ENST00000581963 HSPA6P17066 643 aa8.62□□□□□ -1.03
CDK12-207ENST00000581963 PIGBQ92521 554 aa8.62□□□□□ -1.03
CDK12-207ENST00000581963 AK7Q96M32 723 aa8.62□□□□□ -1.03
CDK12-207ENST00000581963 VIRMAQ69YN4 1812 aaKnown RBP8.61□□□□□ -1.03
CDK12-207ENST00000581963 WDR90Q96KV7 1748 aa8.61□□□□□ -1.03
CDK12-207ENST00000581963 LINC00116Q8NCU8 138 aa8.61□□□□□ -1.03
CDK12-207ENST00000581963 SMARCC1Q92922 1105 aaPredicted RBP8.61□□□□□ -1.03
CDK12-207ENST00000581963 EMILIN1Q9Y6C2 1016 aa8.61□□□□□ -1.03
CDK12-207ENST00000581963 PXDNLA1KZ92 1463 aa8.61□□□□□ -1.03
CDK12-207ENST00000581963 SBF1O95248 1867 aa8.61□□□□□ -1.03
CDK12-207ENST00000581963 KIF3CO14782 793 aa8.6□□□□□ -1.03
CDK12-207ENST00000581963 HMGB2P26583 209 aaKnown RBP8.6□□□□□ -1.03
CDK12-207ENST00000581963 SSFA2P28290 1259 aa8.6□□□□□ -1.03
CDK12-207ENST00000581963 NKX1-1Q15270 411 aaPredicted RBP8.6□□□□□ -1.03
CDK12-207ENST00000581963 LOC102724428A0A0B4J2F2 783 aa8.59□□□□□ -1.03
CDK12-207ENST00000581963 SLC24A1O60721 1099 aa8.59□□□□□ -1.03
CDK12-207ENST00000581963 SIK1P57059 783 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms