RNA–Protein interactions for RNA: ENST00000581298.5

SNX11-208, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-208ENST00000581298 NBPF4Q96M43 638 aa9.92□□□□□ -0.82
SNX11-208ENST00000581298 PPP1R1BQ9UD71 204 aaPredicted RBP9.92□□□□□ -0.82
SNX11-208ENST00000581298 FAM208AQ9UK61 1670 aaKnown RBP9.92□□□□□ -0.82
SNX11-208ENST00000581298 SBF2Q86WG5 1849 aa9.91□□□□□ -0.82
SNX11-208ENST00000581298 RGPD3A6NKT7 1758 aaPredicted RBP9.91□□□□□ -0.82
SNX11-208ENST00000581298 RGPD4Q7Z3J3 1758 aa9.91□□□□□ -0.82
SNX11-208ENST00000581298 PLEKHG2Q9H7P9 1386 aa9.91□□□□□ -0.82
SNX11-208ENST00000581298 CAPN15O75808 1086 aa9.91□□□□□ -0.82
SNX11-208ENST00000581298 HSP90AB2PQ58FF8 381 aa9.91□□□□□ -0.82
SNX11-208ENST00000581298 PTF1AQ7RTS3 328 aa9.91□□□□□ -0.82
SNX11-208ENST00000581298 PANK3Q9H999 370 aa9.91□□□□□ -0.82
SNX11-208ENST00000581298 POLKQ9UBT6 870 aa9.91□□□□□ -0.82
SNX11-208ENST00000581298 RREB1Q92766 1687 aa9.9□□□□□ -0.83
SNX11-208ENST00000581298 PER1O15534 1290 aaPredicted RBP9.89□□□□□ -0.83
SNX11-208ENST00000581298 EMILIN1Q9Y6C2 1016 aa9.89□□□□□ -0.83
SNX11-208ENST00000581298 SMG6Q86US8 1419 aaKnown RBP9.89□□□□□ -0.83
SNX11-208ENST00000581298 KIF20BQ96Q89 1820 aa9.89□□□□□ -0.83
SNX11-208ENST00000581298 KIF7Q2M1P5 1343 aa9.88□□□□□ -0.83
SNX11-208ENST00000581298 ANKRD26Q9UPS8 1709 aa9.88□□□□□ -0.83
SNX11-208ENST00000581298 KCNQ2O43526 872 aa9.88□□□□□ -0.83
SNX11-208ENST00000581298 GIGYF1O75420 1035 aaPredicted RBP9.88□□□□□ -0.83
SNX11-208ENST00000581298 AMER1Q5JTC6 1135 aaPredicted RBP9.88□□□□□ -0.83
SNX11-208ENST00000581298 ZCRB1Q8TBF4 217 aaKnown RBP9.88□□□□□ -0.83
SNX11-208ENST00000581298 LTV1Q96GA3 475 aaPredicted RBP9.88□□□□□ -0.83
SNX11-208ENST00000581298 SPON1Q9HCB6 807 aa9.88□□□□□ -0.83
SNX11-208ENST00000581298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.88□□□□□ -0.83
SNX11-208ENST00000581298 PCDH10Q9P2E7 1040 aa9.88□□□□□ -0.83
SNX11-208ENST00000581298 MEGF6O75095 1541 aa9.87□□□□□ -0.83
SNX11-208ENST00000581298 GOLGB1Q14789 3259 aaKnown RBP9.87□□□□□ -0.83
SNX11-208ENST00000581298 NPM3O75607 178 aaKnown RBP9.87□□□□□ -0.83
SNX11-208ENST00000581298 NBPF14Q5TI25 921 aa9.87□□□□□ -0.83
SNX11-208ENST00000581298 NPC1L1Q9UHC9 1359 aa9.87□□□□□ -0.83
SNX11-208ENST00000581298 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
SNX11-208ENST00000581298 TXNRD1Q16881 649 aa9.86□□□□□ -0.83
SNX11-208ENST00000581298 NUP188Q5SRE5 1749 aa9.86□□□□□ -0.83
SNX11-208ENST00000581298 EYA1Q99502 592 aa9.86□□□□□ -0.83
SNX11-208ENST00000581298 NHSQ6T4R5 1651 aa9.86□□□□□ -0.83
SNX11-208ENST00000581298 TATP17735 454 aaPredicted RBP9.85□□□□□ -0.83
SNX11-208ENST00000581298 RAPGEF4Q8WZA2 1011 aa9.85□□□□□ -0.83
SNX11-208ENST00000581298 EIF4A2Q14240 407 aaKnown RBP9.84□□□□□ -0.83
SNX11-208ENST00000581298 SLC27A3Q5K4L6 730 aa9.84□□□□□ -0.83
SNX11-208ENST00000581298 ANO8Q9HCE9 1232 aaPredicted RBP9.84□□□□□ -0.83
SNX11-208ENST00000581298 KNSTRNQ9Y448 316 aa9.84□□□□□ -0.83
SNX11-208ENST00000581298 MAP2P11137 1827 aaKnown RBP9.84□□□□□ -0.83
SNX11-208ENST00000581298 IGSF1Q8N6C5 1336 aa9.83□□□□□ -0.84
SNX11-208ENST00000581298 SHANK3Q9BYB0 1731 aa9.83□□□□□ -0.84
SNX11-208ENST00000581298 CYP27B1O15528 508 aa9.83□□□□□ -0.84
SNX11-208ENST00000581298 USHBP1Q8N6Y0 703 aa9.83□□□□□ -0.84
SNX11-208ENST00000581298 DDX54Q8TDD1 881 aaKnown RBP9.83□□□□□ -0.84
SNX11-208ENST00000581298 ACSBG1Q96GR2 724 aa9.83□□□□□ -0.84
SNX11-208ENST00000581298 RGPD2P0DJD1 1756 aa9.83□□□□□ -0.84
SNX11-208ENST00000581298 PCDH11XQ9BZA7 1347 aa9.82□□□□□ -0.84
SNX11-208ENST00000581298 PCDH11YQ9BZA8 1340 aa9.82□□□□□ -0.84
SNX11-208ENST00000581298 DSG3P32926 999 aa9.82□□□□□ -0.84
SNX11-208ENST00000581298 PRIM1P49642 420 aaKnown RBP9.82□□□□□ -0.84
SNX11-208ENST00000581298 SLC15A2Q16348 729 aa9.82□□□□□ -0.84
SNX11-208ENST00000581298 MORC1Q86VD1 984 aa9.82□□□□□ -0.84
SNX11-208ENST00000581298 POLR3GLQ9BT43 218 aa9.82□□□□□ -0.84
SNX11-208ENST00000581298 LRRC4BQ9NT99 713 aa9.82□□□□□ -0.84
SNX11-208ENST00000581298 U3KPZ7 1027 aaPredicted RBP9.82□□□□□ -0.84
SNX11-208ENST00000581298 PAPPAQ13219 1627 aa9.82□□□□□ -0.84
SNX11-208ENST00000581298 KAT6BQ8WYB5 2073 aa9.81□□□□□ -0.84
SNX11-208ENST00000581298 IL13P35225 146 aa9.81□□□□□ -0.84
SNX11-208ENST00000581298 AKT1S1Q96B36 256 aa9.81□□□□□ -0.84
SNX11-208ENST00000581298 KDRP35968 1356 aa9.8□□□□□ -0.84
SNX11-208ENST00000581298 PKD1L3Q7Z443 1732 aa9.8□□□□□ -0.84
SNX11-208ENST00000581298 HMGB2P26583 209 aaKnown RBP9.8□□□□□ -0.84
SNX11-208ENST00000581298 SPG7Q9UQ90 795 aa9.8□□□□□ -0.84
SNX11-208ENST00000581298 BTAF1O14981 1849 aa9.79□□□□□ -0.84
SNX11-208ENST00000581298 PCNTO95613 3336 aa9.79□□□□□ -0.84
SNX11-208ENST00000581298 PPM1GO15355 546 aaPredicted RBP9.79□□□□□ -0.84
SNX11-208ENST00000581298 SGIP1Q9BQI5 828 aa9.79□□□□□ -0.84
SNX11-208ENST00000581298 SPINK5Q9NQ38 1064 aaPredicted RBP9.79□□□□□ -0.84
SNX11-208ENST00000581298 STK32BQ9NY57 414 aa9.79□□□□□ -0.84
SNX11-208ENST00000581298 CASZ1Q86V15 1759 aa9.78□□□□□ -0.84
SNX11-208ENST00000581298 PHKG2P15735 406 aa9.78□□□□□ -0.84
SNX11-208ENST00000581298 AMOTQ4VCS5 1084 aa9.78□□□□□ -0.84
SNX11-208ENST00000581298 IFNL2Q8IZJ0 200 aa9.78□□□□□ -0.84
SNX11-208ENST00000581298 PTGER2P43116 358 aa9.77□□□□□ -0.85
SNX11-208ENST00000581298 TNNT2P45379 298 aaPredicted RBP9.77□□□□□ -0.85
SNX11-208ENST00000581298 PRELPP51888 382 aa9.77□□□□□ -0.85
SNX11-208ENST00000581298 SLC16A10Q8TF71 515 aa9.77□□□□□ -0.85
SNX11-208ENST00000581298 PIGBQ92521 554 aa9.77□□□□□ -0.85
SNX11-208ENST00000581298 SMARCC1Q92922 1105 aaPredicted RBP9.77□□□□□ -0.85
SNX11-208ENST00000581298 LY75O60449 1722 aa9.76□□□□□ -0.85
SNX11-208ENST00000581298 ERVV-2B6SEH9 535 aa9.76□□□□□ -0.85
SNX11-208ENST00000581298 MTHFSP49914 203 aa9.76□□□□□ -0.85
SNX11-208ENST00000581298 ZNF827Q17R98 1081 aa9.76□□□□□ -0.85
SNX11-208ENST00000581298 PLEKHO1Q53GL0 409 aaPredicted RBP9.76□□□□□ -0.85
SNX11-208ENST00000581298 PDGFDQ9GZP0 370 aaPredicted RBP9.76□□□□□ -0.85
SNX11-208ENST00000581298 MTFR1LQ9H019 292 aa9.76□□□□□ -0.85
SNX11-208ENST00000581298 HSP90AB1P08238 724 aaKnown RBP9.75□□□□□ -0.85
SNX11-208ENST00000581298 HSPA6P17066 643 aa9.75□□□□□ -0.85
SNX11-208ENST00000581298 DOT1LQ8TEK3 1739 aa9.75□□□□□ -0.85
SNX11-208ENST00000581298 SYTL4Q96C24 671 aaPredicted RBP9.74□□□□□ -0.85
SNX11-208ENST00000581298 DCAF5Q96JK2 942 aa9.74□□□□□ -0.85
SNX11-208ENST00000581298 CCNL1Q9UK58 526 aaPredicted RBP9.74□□□□□ -0.85
SNX11-208ENST00000581298 PNPLA7Q6ZV29 1317 aa9.74□□□□□ -0.85
SNX11-208ENST00000581298 PALLDQ8WX93 1383 aa9.74□□□□□ -0.85
SNX11-208ENST00000581298 MAP3K5Q99683 1374 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms