RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 HSPA6P17066 643 aa14.84□□□□□ -0.03
RFFL-209ENST00000581265 PRIM1P49642 420 aaKnown RBP14.84□□□□□ -0.03
RFFL-209ENST00000581265 ZCRB1Q8TBF4 217 aaKnown RBP14.84□□□□□ -0.03
RFFL-209ENST00000581265 GPBP1L1Q9HC44 474 aaPredicted RBP14.84□□□□□ -0.03
RFFL-209ENST00000581265 BTAF1O14981 1849 aa14.83□□□□□ -0.04
RFFL-209ENST00000581265 RRS1Q15050 365 aaKnown RBP14.83□□□□□ -0.04
RFFL-209ENST00000581265 ZNF827Q17R98 1081 aa14.83□□□□□ -0.04
RFFL-209ENST00000581265 CDCA8Q53HL2 280 aa14.83□□□□□ -0.04
RFFL-209ENST00000581265 NBPF6Q5VWK0 638 aa14.83□□□□□ -0.04
RFFL-209ENST00000581265 SLC16A10Q8TF71 515 aa14.83□□□□□ -0.04
RFFL-209ENST00000581265 AKT1S1Q96B36 256 aa14.83□□□□□ -0.04
RFFL-209ENST00000581265 NBPF4Q96M43 638 aa14.83□□□□□ -0.04
RFFL-209ENST00000581265 GGNBP2Q9H3C7 697 aa14.83□□□□□ -0.04
RFFL-209ENST00000581265 USP47Q96K76 1375 aa14.83□□□□□ -0.04
RFFL-209ENST00000581265 FAM208AQ9UK61 1670 aaKnown RBP14.82□□□□□ -0.04
RFFL-209ENST00000581265 CGNL1Q0VF96 1302 aa14.82□□□□□ -0.04
RFFL-209ENST00000581265 RTL1A6NKG5 1358 aa14.82□□□□□ -0.04
RFFL-209ENST00000581265 PAPPAQ13219 1627 aa14.81□□□□□ -0.04
RFFL-209ENST00000581265 SYTL4Q96C24 671 aaPredicted RBP14.81□□□□□ -0.04
RFFL-209ENST00000581265 SHANK3Q9BYB0 1731 aa14.8□□□□□ -0.04
RFFL-209ENST00000581265 TIMELESSQ9UNS1 1208 aa14.8□□□□□ -0.04
RFFL-209ENST00000581265 ATP10DQ9P241 1426 aa14.8□□□□□ -0.04
RFFL-209ENST00000581265 NLGN2Q8NFZ4 835 aa14.79□□□□□ -0.04
RFFL-209ENST00000581265 ZNF526Q8TF50 670 aaPredicted RBP14.79□□□□□ -0.04
RFFL-209ENST00000581265 MEGF6O75095 1541 aa14.78□□□□□ -0.04
RFFL-209ENST00000581265 NSD2O96028 1365 aa14.78□□□□□ -0.04
RFFL-209ENST00000581265 INSRP06213 1382 aa14.78□□□□□ -0.04
RFFL-209ENST00000581265 KIF24Q5T7B8 1368 aa14.78□□□□□ -0.04
RFFL-209ENST00000581265 HSP90AB2PQ58FF8 381 aa14.78□□□□□ -0.04
RFFL-209ENST00000581265 RAPGEF4Q8WZA2 1011 aa14.78□□□□□ -0.04
RFFL-209ENST00000581265 CARD14Q9BXL6 1004 aa14.78□□□□□ -0.04
RFFL-209ENST00000581265 PNPLA7Q6ZV29 1317 aa14.77□□□□□ -0.04
RFFL-209ENST00000581265 MSH5O43196 834 aa14.77□□□□□ -0.05
RFFL-209ENST00000581265 YBX3P16989 372 aaKnown RBP eCLIP14.77□□□□□ -0.05
RFFL-209ENST00000581265 KCNQ4P56696 695 aa14.77□□□□□ -0.05
RFFL-209ENST00000581265 USHBP1Q8N6Y0 703 aa14.77□□□□□ -0.05
RFFL-209ENST00000581265 TFCP2L1Q9NZI6 479 aa14.77□□□□□ -0.05
RFFL-209ENST00000581265 TATP17735 454 aaPredicted RBP14.76□□□□□ -0.05
RFFL-209ENST00000581265 SMG6Q86US8 1419 aaKnown RBP14.75□□□□□ -0.05
RFFL-209ENST00000581265 RGPD2P0DJD1 1756 aa14.75□□□□□ -0.05
RFFL-209ENST00000581265 FLT4P35916 1363 aa14.75□□□□□ -0.05
RFFL-209ENST00000581265 CCNL1Q9UK58 526 aaPredicted RBP14.75□□□□□ -0.05
RFFL-209ENST00000581265 CAPN15O75808 1086 aa14.73□□□□□ -0.05
RFFL-209ENST00000581265 HMGB2P26583 209 aaKnown RBP14.73□□□□□ -0.05
RFFL-209ENST00000581265 PCDH11XQ9BZA7 1347 aa14.72□□□□□ -0.05
RFFL-209ENST00000581265 PCDH11YQ9BZA8 1340 aa14.72□□□□□ -0.05
RFFL-209ENST00000581265 CYP27B1O15528 508 aa14.72□□□□□ -0.05
RFFL-209ENST00000581265 EMILIN1Q9Y6C2 1016 aa14.72□□□□□ -0.05
RFFL-209ENST00000581265 LY75O60449 1722 aa14.72□□□□□ -0.05
RFFL-209ENST00000581265 QSER1Q2KHR3 1735 aa14.72□□□□□ -0.05
RFFL-209ENST00000581265 DOT1LQ8TEK3 1739 aa14.72□□□□□ -0.05
RFFL-209ENST00000581265 CLSPNQ9HAW4 1339 aa14.71□□□□□ -0.05
RFFL-209ENST00000581265 APLP1P51693 650 aa14.71□□□□□ -0.05
RFFL-209ENST00000581265 UTRNP46939 3433 aa14.71□□□□□ -0.05
RFFL-209ENST00000581265 WASHC2AQ641Q2 1341 aa14.7□□□□□ -0.06
RFFL-209ENST00000581265 NSD3Q9BZ95 1437 aa14.7□□□□□ -0.06
RFFL-209ENST00000581265 COL23A1Q86Y22 540 aaPredicted RBP14.7□□□□□ -0.06
RFFL-209ENST00000581265 COL24A1Q17RW2 1714 aa14.69□□□□□ -0.06
RFFL-209ENST00000581265 NKX1-1Q15270 411 aaPredicted RBP14.69□□□□□ -0.06
RFFL-209ENST00000581265 MPRIPQ6WCQ1 1025 aa14.69□□□□□ -0.06
RFFL-209ENST00000581265 PPM1GO15355 546 aaPredicted RBP14.68□□□□□ -0.06
RFFL-209ENST00000581265 FLAD1Q8NFF5 587 aa14.68□□□□□ -0.06
RFFL-209ENST00000581265 SMARCC1Q92922 1105 aaPredicted RBP14.68□□□□□ -0.06
RFFL-209ENST00000581265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.68□□□□□ -0.06
RFFL-209ENST00000581265 KIF20BQ96Q89 1820 aa14.68□□□□□ -0.06
RFFL-209ENST00000581265 NCAPD2Q15021 1401 aa14.67□□□□□ -0.06
RFFL-209ENST00000581265 POLKQ9UBT6 870 aa14.67□□□□□ -0.06
RFFL-209ENST00000581265 SPG7Q9UQ90 795 aa14.67□□□□□ -0.06
RFFL-209ENST00000581265 PALLDQ8WX93 1383 aa14.67□□□□□ -0.06
RFFL-209ENST00000581265 CEP350Q5VT06 3117 aa14.67□□□□□ -0.06
RFFL-209ENST00000581265 MSL1Q68DK7 614 aa14.66□□□□□ -0.06
RFFL-209ENST00000581265 PIGBQ92521 554 aa14.66□□□□□ -0.06
RFFL-209ENST00000581265 EYA1Q99502 592 aa14.66□□□□□ -0.06
RFFL-209ENST00000581265 TUBGCP6Q96RT7 1819 aa14.65□□□□□ -0.06
RFFL-209ENST00000581265 CD2APQ9Y5K6 639 aa14.65□□□□□ -0.06
RFFL-209ENST00000581265 PCGF6Q9BYE7 350 aa14.64□□□□□ -0.07
RFFL-209ENST00000581265 ADCY9O60503 1353 aa14.62□□□□□ -0.07
RFFL-209ENST00000581265 KIF3CO14782 793 aa14.62□□□□□ -0.07
RFFL-209ENST00000581265 IFNL2Q8IZJ0 200 aa14.62□□□□□ -0.07
RFFL-209ENST00000581265 TNS4Q8IZW8 715 aa14.62□□□□□ -0.07
RFFL-209ENST00000581265 PKD1L3Q7Z443 1732 aa14.61□□□□□ -0.07
RFFL-209ENST00000581265 LOC102724428A0A0B4J2F2 783 aa14.61□□□□□ -0.07
RFFL-209ENST00000581265 PHKG2P15735 406 aa14.61□□□□□ -0.07
RFFL-209ENST00000581265 SIK1P57059 783 aa14.61□□□□□ -0.07
RFFL-209ENST00000581265 EIF4G2P78344 907 aaKnown RBP eCLIP14.61□□□□□ -0.07
RFFL-209ENST00000581265 EIF4A2Q14240 407 aaKnown RBP14.61□□□□□ -0.07
RFFL-209ENST00000581265 POLR3GLQ9BT43 218 aa14.61□□□□□ -0.07
RFFL-209ENST00000581265 WWC3Q9ULE0 1092 aa14.61□□□□□ -0.07
RFFL-209ENST00000581265 MAP2P11137 1827 aaKnown RBP14.61□□□□□ -0.07
RFFL-209ENST00000581265 ANKRD26Q9UPS8 1709 aa14.61□□□□□ -0.07
RFFL-209ENST00000581265 TNNT2P45379 298 aaPredicted RBP14.6□□□□□ -0.07
RFFL-209ENST00000581265 COL13A1Q5TAT6 717 aaPredicted RBP14.6□□□□□ -0.07
RFFL-209ENST00000581265 AMIGO3Q86WK7 504 aa14.6□□□□□ -0.07
RFFL-209ENST00000581265 DNAJC5GQ8N7S2 189 aa14.6□□□□□ -0.07
RFFL-209ENST00000581265 AK7Q96M32 723 aa14.6□□□□□ -0.07
RFFL-209ENST00000581265 TMOD3Q9NYL9 352 aa14.6□□□□□ -0.07
RFFL-209ENST00000581265 C5P01031 1676 aa14.6□□□□□ -0.07
RFFL-209ENST00000581265 PLEKHG2Q9H7P9 1386 aa14.6□□□□□ -0.07
RFFL-209ENST00000581265 ITGB4P16144 1822 aa14.59□□□□□ -0.07
RFFL-209ENST00000581265 TOGARAM1Q9Y4F4 1720 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms