RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-219ENST00000581250 PSDA5PKW4 1024 aaPredicted RBP16.28■□□□□ 0.2
PPP4R1-219ENST00000581250 BTAF1O14981 1849 aa16.27■□□□□ 0.2
PPP4R1-219ENST00000581250 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
PPP4R1-219ENST00000581250 RAPGEF4Q8WZA2 1011 aa16.27■□□□□ 0.2
PPP4R1-219ENST00000581250 BCL11BQ9C0K0 894 aaPredicted RBP16.27■□□□□ 0.2
PPP4R1-219ENST00000581250 PARD3Q8TEW0 1356 aa16.26■□□□□ 0.19
PPP4R1-219ENST00000581250 KCNQ2O43526 872 aa16.26■□□□□ 0.19
PPP4R1-219ENST00000581250 AMER1Q5JTC6 1135 aaPredicted RBP16.26■□□□□ 0.19
PPP4R1-219ENST00000581250 CC2D1BQ5T0F9 858 aaKnown RBP16.25■□□□□ 0.19
PPP4R1-219ENST00000581250 ZCRB1Q8TBF4 217 aaKnown RBP16.25■□□□□ 0.19
PPP4R1-219ENST00000581250 PKD1L3Q7Z443 1732 aa16.25■□□□□ 0.19
PPP4R1-219ENST00000581250 TATP17735 454 aaPredicted RBP16.24■□□□□ 0.19
PPP4R1-219ENST00000581250 EIF4A2Q14240 407 aaKnown RBP16.24■□□□□ 0.19
PPP4R1-219ENST00000581250 NCAPD2Q15021 1401 aa16.23■□□□□ 0.19
PPP4R1-219ENST00000581250 R3HDM1Q15032 1099 aaKnown RBP16.23■□□□□ 0.19
PPP4R1-219ENST00000581250 PER1O15534 1290 aaPredicted RBP16.22■□□□□ 0.19
PPP4R1-219ENST00000581250 EYA1Q99502 592 aa16.22■□□□□ 0.19
PPP4R1-219ENST00000581250 SYTL4Q96C24 671 aaPredicted RBP16.21■□□□□ 0.19
PPP4R1-219ENST00000581250 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
PPP4R1-219ENST00000581250 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
PPP4R1-219ENST00000581250 TOGARAM1Q9Y4F4 1720 aa16.19■□□□□ 0.18
PPP4R1-219ENST00000581250 PLSCR1O15162 318 aa16.19■□□□□ 0.18
PPP4R1-219ENST00000581250 IGSF1Q8N6C5 1336 aa16.18■□□□□ 0.18
PPP4R1-219ENST00000581250 CYP27B1O15528 508 aa16.17■□□□□ 0.18
PPP4R1-219ENST00000581250 PRIM1P49642 420 aaKnown RBP16.17■□□□□ 0.18
PPP4R1-219ENST00000581250 ANO8Q9HCE9 1232 aaPredicted RBP16.17■□□□□ 0.18
PPP4R1-219ENST00000581250 TXNRD1Q16881 649 aa16.16■□□□□ 0.18
PPP4R1-219ENST00000581250 NBPF14Q5TI25 921 aa16.16■□□□□ 0.18
PPP4R1-219ENST00000581250 PROM2Q8N271 834 aa16.16■□□□□ 0.18
PPP4R1-219ENST00000581250 LRP5O75197 1615 aa16.16■□□□□ 0.18
PPP4R1-219ENST00000581250 ITGB4P16144 1822 aa16.15■□□□□ 0.18
PPP4R1-219ENST00000581250 MTHFSP49914 203 aa16.15■□□□□ 0.18
PPP4R1-219ENST00000581250 AEBP1Q8IUX7 1158 aa16.15■□□□□ 0.18
PPP4R1-219ENST00000581250 NPC1L1Q9UHC9 1359 aa16.14■□□□□ 0.17
PPP4R1-219ENST00000581250 SPG7Q9UQ90 795 aa16.14■□□□□ 0.17
PPP4R1-219ENST00000581250 PAPPAQ13219 1627 aa16.13■□□□□ 0.17
PPP4R1-219ENST00000581250 LY75O60449 1722 aa16.12■□□□□ 0.17
PPP4R1-219ENST00000581250 IL13P35225 146 aa16.11■□□□□ 0.17
PPP4R1-219ENST00000581250 KCNQ4P56696 695 aa16.11■□□□□ 0.17
PPP4R1-219ENST00000581250 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
PPP4R1-219ENST00000581250 COL3A1P02461 1466 aaPredicted RBP16.1■□□□□ 0.17
PPP4R1-219ENST00000581250 SULT6B1Q6IMI4 303 aa16.1■□□□□ 0.17
PPP4R1-219ENST00000581250 PHKG2P15735 406 aa16.09■□□□□ 0.17
PPP4R1-219ENST00000581250 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
PPP4R1-219ENST00000581250 LRRC4BQ9NT99 713 aa16.09■□□□□ 0.17
PPP4R1-219ENST00000581250 STK32BQ9NY57 414 aa16.09■□□□□ 0.17
PPP4R1-219ENST00000581250 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.09■□□□□ 0.171e-8■□□□□ 10.5
PPP4R1-219ENST00000581250 TUBGCP6Q96RT7 1819 aa16.08■□□□□ 0.17
PPP4R1-219ENST00000581250 HMOX1P09601 288 aa16.08■□□□□ 0.16
PPP4R1-219ENST00000581250 ZNF530Q6P9A1 599 aaPredicted RBP16.08■□□□□ 0.16
PPP4R1-219ENST00000581250 IFNL2Q8IZJ0 200 aa16.08■□□□□ 0.16
PPP4R1-219ENST00000581250 KDRP35968 1356 aa16.08■□□□□ 0.16
PPP4R1-219ENST00000581250 DIAPH1O60610 1272 aaKnown RBP16.07■□□□□ 0.16
PPP4R1-219ENST00000581250 ZNF827Q17R98 1081 aa16.07■□□□□ 0.16
PPP4R1-219ENST00000581250 PDGFDQ9GZP0 370 aaPredicted RBP16.07■□□□□ 0.16
PPP4R1-219ENST00000581250 C5P01031 1676 aa16.06■□□□□ 0.16
PPP4R1-219ENST00000581250 PALLDQ8WX93 1383 aa16.06■□□□□ 0.16
PPP4R1-219ENST00000581250 PLEKHG2Q9H7P9 1386 aa16.06■□□□□ 0.16
PPP4R1-219ENST00000581250 NKX1-1Q15270 411 aaPredicted RBP16.06■□□□□ 0.16
PPP4R1-219ENST00000581250 SLC15A2Q16348 729 aa16.06■□□□□ 0.16
PPP4R1-219ENST00000581250 PLEKHO1Q53GL0 409 aaPredicted RBP16.06■□□□□ 0.16
PPP4R1-219ENST00000581250 CCNL1Q9UK58 526 aaPredicted RBP16.05■□□□□ 0.16
PPP4R1-219ENST00000581250 KDM6AO15550 1401 aaPredicted RBP16.04■□□□□ 0.16
PPP4R1-219ENST00000581250 TAF1LQ8IZX4 1826 aa16.04■□□□□ 0.16
PPP4R1-219ENST00000581250 U2SURPO15042 1029 aaKnown RBP16.04■□□□□ 0.16
PPP4R1-219ENST00000581250 SLC27A3Q5K4L6 730 aa16.04■□□□□ 0.16
PPP4R1-219ENST00000581250 PIGBQ92521 554 aa16.04■□□□□ 0.16
PPP4R1-219ENST00000581250 TMOD3Q9NYL9 352 aa16.04■□□□□ 0.16
PPP4R1-219ENST00000581250 VIRMAQ69YN4 1812 aaKnown RBP16.03■□□□□ 0.16
PPP4R1-219ENST00000581250 PPP2R1AP30153 589 aa16.03■□□□□ 0.16
PPP4R1-219ENST00000581250 AMOTQ4VCS5 1084 aa16.03■□□□□ 0.16
PPP4R1-219ENST00000581250 C1orf141Q5JVX7 400 aa16.03■□□□□ 0.16
PPP4R1-219ENST00000581250 ZBTB7AO95365 584 aa16.02■□□□□ 0.16
PPP4R1-219ENST00000581250 SCN11AQ9UI33 1791 aa16.02■□□□□ 0.15
PPP4R1-219ENST00000581250 QSER1Q2KHR3 1735 aa16.02■□□□□ 0.15
PPP4R1-219ENST00000581250 CFAP53Q96M91 514 aa16.01■□□□□ 0.15
PPP4R1-219ENST00000581250 HSP90AB1P08238 724 aaKnown RBP16■□□□□ 0.15
PPP4R1-219ENST00000581250 DDX10Q13206 875 aaKnown RBP16■□□□□ 0.15
PPP4R1-219ENST00000581250 SMARCC1Q92922 1105 aaPredicted RBP16■□□□□ 0.15
PPP4R1-219ENST00000581250 AKT1S1Q96B36 256 aa16■□□□□ 0.15
PPP4R1-219ENST00000581250 DCAF5Q96JK2 942 aa16■□□□□ 0.15
PPP4R1-219ENST00000581250 SPON1Q9HCB6 807 aa16■□□□□ 0.15
PPP4R1-219ENST00000581250 ASAP1Q9ULH1 1129 aa16■□□□□ 0.15
PPP4R1-219ENST00000581250 TFCP2L1Q9NZI6 479 aa15.99■□□□□ 0.15
PPP4R1-219ENST00000581250 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
PPP4R1-219ENST00000581250 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
PPP4R1-219ENST00000581250 PNPLA7Q6ZV29 1317 aa15.97■□□□□ 0.15
PPP4R1-219ENST00000581250 ERVV-2B6SEH9 535 aa15.97■□□□□ 0.15
PPP4R1-219ENST00000581250 CABP4P57796 275 aa15.97■□□□□ 0.15
PPP4R1-219ENST00000581250 PPP1R1BQ9UD71 204 aaPredicted RBP15.97■□□□□ 0.15
PPP4R1-219ENST00000581250 LOC102724428A0A0B4J2F2 783 aa15.96■□□□□ 0.15
PPP4R1-219ENST00000581250 ZEB1P37275 1124 aaPredicted RBP15.96■□□□□ 0.15
PPP4R1-219ENST00000581250 SIK1P57059 783 aa15.96■□□□□ 0.15
PPP4R1-219ENST00000581250 MTHFSDQ2M296 383 aaKnown RBP15.96■□□□□ 0.15
PPP4R1-219ENST00000581250 ATG3Q9NT62 314 aa15.96■□□□□ 0.15
PPP4R1-219ENST00000581250 AKAP4Q5JQC9 854 aa15.95■□□□□ 0.14
PPP4R1-219ENST00000581250 UBR3Q6ZT12 1888 aa15.95■□□□□ 0.14
PPP4R1-219ENST00000581250 MSH5O43196 834 aa15.94■□□□□ 0.14
PPP4R1-219ENST00000581250 U2AF1L5P0DN76 240 aaPredicted RBP15.94■□□□□ 0.14
PPP4R1-219ENST00000581250 PRKAR2BP31323 418 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms