RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 ST8SIA5O15466 376 aa8.66□□□□□ -1.02
NF1-220ENST00000581113 CTC1Q2NKJ3 1217 aa8.66□□□□□ -1.02
NF1-220ENST00000581113 PLEKHM2Q8IWE5 1019 aa8.66□□□□□ -1.02
NF1-220ENST00000581113 LZTS3O60299 673 aaPredicted RBP8.65□□□□□ -1.02
NF1-220ENST00000581113 ADD1P35611 737 aaKnown RBP8.65□□□□□ -1.02
NF1-220ENST00000581113 Q6ZVU0 165 aa8.64□□□□□ -1.03
NF1-220ENST00000581113 OSBPL3Q9H4L5 887 aa8.64□□□□□ -1.03
NF1-220ENST00000581113 NOD1Q9Y239 953 aa8.64□□□□□ -1.03
NF1-220ENST00000581113 SMCPP49901 116 aaPredicted RBP8.64□□□□□ -1.03
NF1-220ENST00000581113 MEIOBQ8N635 442 aa8.64□□□□□ -1.03
NF1-220ENST00000581113 AGBL1Q96MI9 1066 aa8.64□□□□□ -1.03
NF1-220ENST00000581113 AAASQ9NRG9 546 aa8.64□□□□□ -1.03
NF1-220ENST00000581113 MKRN1Q9UHC7 482 aaKnown RBP8.64□□□□□ -1.03
NF1-220ENST00000581113 ADH1AP07327 375 aa8.63□□□□□ -1.03
NF1-220ENST00000581113 BMP1P13497 986 aa8.63□□□□□ -1.03
NF1-220ENST00000581113 CYP2U1Q7Z449 544 aa8.63□□□□□ -1.03
NF1-220ENST00000581113 CRIPAKQ8N1N5 446 aa8.63□□□□□ -1.03
NF1-220ENST00000581113 ATP5J2-PTCD1G3V325 749 aa8.62□□□□□ -1.03
NF1-220ENST00000581113 UPP2O95045 317 aa8.62□□□□□ -1.03
NF1-220ENST00000581113 RELBQ01201 579 aa8.62□□□□□ -1.03
NF1-220ENST00000581113 VRTNQ9H8Y1 702 aa8.62□□□□□ -1.03
NF1-220ENST00000581113 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.61□□□□□ -1.03
NF1-220ENST00000581113 GTF2IP78347 998 aa8.61□□□□□ -1.03
NF1-220ENST00000581113 PSME1Q06323 249 aa8.61□□□□□ -1.03
NF1-220ENST00000581113 CDCA8Q53HL2 280 aa8.61□□□□□ -1.03
NF1-220ENST00000581113 TRIM50Q86XT4 487 aa8.61□□□□□ -1.03
NF1-220ENST00000581113 LINC00528Q8N1L1 170 aa8.61□□□□□ -1.03
NF1-220ENST00000581113 RASA1P20936 1047 aa8.6□□□□□ -1.03
NF1-220ENST00000581113 C6orf118Q5T5N4 469 aa8.6□□□□□ -1.03
NF1-220ENST00000581113 KANK4Q5T7N3 995 aaPredicted RBP8.6□□□□□ -1.03
NF1-220ENST00000581113 MRPL14Q6P1L8 145 aaKnown RBP8.6□□□□□ -1.03
NF1-220ENST00000581113 TSEN34Q9BSV6 310 aaKnown RBP8.6□□□□□ -1.03
NF1-220ENST00000581113 ZNF395Q9H8N7 513 aaPredicted RBP8.6□□□□□ -1.03
NF1-220ENST00000581113 BMP2P12643 396 aa8.59□□□□□ -1.03
NF1-220ENST00000581113 ATP1A2P50993 1020 aa8.59□□□□□ -1.03
NF1-220ENST00000581113 CLDN10P78369 228 aa8.59□□□□□ -1.03
NF1-220ENST00000581113 OGFOD1Q8N543 542 aa8.59□□□□□ -1.03
NF1-220ENST00000581113 KDF1Q8NAX2 398 aaPredicted RBP8.59□□□□□ -1.03
NF1-220ENST00000581113 ARHGEF10LQ9HCE6 1279 aa8.59□□□□□ -1.03
NF1-220ENST00000581113 DACH1Q9UI36 760 aa8.59□□□□□ -1.03
NF1-220ENST00000581113 PCDHGA11Q9Y5H2 935 aa8.59□□□□□ -1.03
NF1-220ENST00000581113 PTGIRP43119 386 aa8.58□□□□□ -1.04
NF1-220ENST00000581113 LARP1Q6PKG0 1096 aaKnown RBP8.58□□□□□ -1.04
NF1-220ENST00000581113 ZNF594Q96JF6 807 aaPredicted RBP8.58□□□□□ -1.04
NF1-220ENST00000581113 PURBQ96QR8 312 aaKnown RBP8.58□□□□□ -1.04
NF1-220ENST00000581113 RAB6BQ9NRW1 208 aa8.58□□□□□ -1.04
NF1-220ENST00000581113 DNAAF2Q9NVR5 837 aaKnown RBP8.58□□□□□ -1.04
NF1-220ENST00000581113 STAU1O95793 577 aaKnown RBP8.57□□□□□ -1.04
NF1-220ENST00000581113 GNRH1P01148 92 aa8.57□□□□□ -1.04
NF1-220ENST00000581113 SCARF1Q14162 830 aa8.57□□□□□ -1.04
NF1-220ENST00000581113 TRIM46Q7Z4K8 759 aa8.57□□□□□ -1.04
NF1-220ENST00000581113 PBXIP1Q96AQ6 731 aa8.57□□□□□ -1.04
NF1-220ENST00000581113 ATP13A2Q9NQ11 1180 aa8.57□□□□□ -1.04
NF1-220ENST00000581113 A0A1W2PRU2 124 aa8.57□□□□□ -1.04
NF1-220ENST00000581113 MEN1O00255 615 aa8.57□□□□□ -1.04
NF1-220ENST00000581113 LCE2BO14633 110 aa8.57□□□□□ -1.04
NF1-220ENST00000581113 CRTC2Q53ET0 693 aaPredicted RBP8.57□□□□□ -1.04
NF1-220ENST00000581113 KIAA1024Q9UPX6 916 aa8.57□□□□□ -1.04
NF1-220ENST00000581113 TPCN2Q8NHX9 752 aa8.56□□□□□ -1.04
NF1-220ENST00000581113 ZFP42Q96MM3 310 aa8.56□□□□□ -1.04
NF1-220ENST00000581113 USP17L15C9J2P7 530 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 USP17L10C9JJH3 530 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 USP17L13C9JLJ4 530 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 USP17L12C9JPN9 530 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 USP17L11C9JVI0 530 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 USP17L21D6R901 530 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 USP17L18D6R9N7 530 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 USP17L22D6RA61 530 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 USP17L17D6RBQ6 530 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 USP17L19D6RCP7 530 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 USP17L20D6RJB6 530 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 GDF10P55107 478 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 USP17L24Q0WX57 530 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 ESCO1Q5FWF5 840 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 CCDC102BQ68D86 513 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 LARGE2Q8N3Y3 721 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 INSM2Q96T92 566 aaPredicted RBP8.55□□□□□ -1.04
NF1-220ENST00000581113 ETNK1Q9HBU6 452 aa8.55□□□□□ -1.04
NF1-220ENST00000581113 POLMQ9NP87 494 aaPredicted RBP8.55□□□□□ -1.04
NF1-220ENST00000581113 RBM19Q9Y4C8 960 aaKnown RBP8.55□□□□□ -1.04
NF1-220ENST00000581113 FAM196BA6NMK8 535 aa8.54□□□□□ -1.04
NF1-220ENST00000581113 ZBTB7BO15156 539 aaPredicted RBP8.54□□□□□ -1.04
NF1-220ENST00000581113 SPINT1O43278 529 aa8.54□□□□□ -1.04
NF1-220ENST00000581113 SCNN1DP51172 638 aa8.54□□□□□ -1.04
NF1-220ENST00000581113 SRPK2P78362 688 aaKnown RBP8.54□□□□□ -1.04
NF1-220ENST00000581113 PTK7Q13308 1070 aa8.54□□□□□ -1.04
NF1-220ENST00000581113 NLRP3Q96P20 1036 aa8.54□□□□□ -1.04
NF1-220ENST00000581113 IL2RAP01589 272 aa8.53□□□□□ -1.04
NF1-220ENST00000581113 CLN3Q13286 438 aa8.53□□□□□ -1.04
NF1-220ENST00000581113 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.53□□□□□ -1.04
NF1-220ENST00000581113 CNKSR1Q969H4 720 aa8.53□□□□□ -1.04
NF1-220ENST00000581113 INHAP05111 366 aa8.52□□□□□ -1.05
NF1-220ENST00000581113 CTSOP43234 321 aaPredicted RBP8.52□□□□□ -1.05
NF1-220ENST00000581113 SIX5Q8N196 739 aa8.52□□□□□ -1.05
NF1-220ENST00000581113 ESYT1Q9BSJ8 1104 aa8.52□□□□□ -1.05
NF1-220ENST00000581113 SERTAD1Q9UHV2 236 aa8.52□□□□□ -1.05
NF1-220ENST00000581113 TMEM229AB2RXF0 380 aa8.51□□□□□ -1.05
NF1-220ENST00000581113 PPP1R15AO75807 674 aaPredicted RBP8.51□□□□□ -1.05
NF1-220ENST00000581113 DPYDQ12882 1025 aa8.51□□□□□ -1.05
NF1-220ENST00000581113 ZNF358Q9NW07 568 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms