RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 BTG4Q9NY30 223 aa8.02□□□□□ -1.13
RNU4ATAC-201ENST00000580972 IL16Q14005 1332 aa8.02□□□□□ -1.13
RNU4ATAC-201ENST00000580972 COL5A2P05997 1499 aaPredicted RBP8.01□□□□□ -1.13
RNU4ATAC-201ENST00000580972 MAP3K5Q99683 1374 aa8.01□□□□□ -1.13
RNU4ATAC-201ENST00000580972 ELL2O00472 640 aaPredicted RBP8.01□□□□□ -1.13
RNU4ATAC-201ENST00000580972 MPRIPQ6WCQ1 1025 aa8.01□□□□□ -1.13
RNU4ATAC-201ENST00000580972 TOM1L2Q6ZVM7 507 aa8.01□□□□□ -1.13
RNU4ATAC-201ENST00000580972 MYH16Q9H6N6 1097 aa8.01□□□□□ -1.13
RNU4ATAC-201ENST00000580972 USP35Q9P2H5 1018 aa8.01□□□□□ -1.13
RNU4ATAC-201ENST00000580972 WDR17Q8IZU2 1322 aa8.01□□□□□ -1.13
RNU4ATAC-201ENST00000580972 COL16A1Q07092 1604 aaPredicted RBP8□□□□□ -1.13
RNU4ATAC-201ENST00000580972 GNAT3A8MTJ3 354 aa8□□□□□ -1.13
RNU4ATAC-201ENST00000580972 KCNQ3O43525 872 aa8□□□□□ -1.13
RNU4ATAC-201ENST00000580972 NEFLP07196 543 aa8□□□□□ -1.13
RNU4ATAC-201ENST00000580972 RARSP54136 660 aaKnown RBP8□□□□□ -1.13
RNU4ATAC-201ENST00000580972 LMOD3Q0VAK6 560 aa8□□□□□ -1.13
RNU4ATAC-201ENST00000580972 C8orf58Q8NAV2 365 aa8□□□□□ -1.13
RNU4ATAC-201ENST00000580972 IFT57Q9NWB7 429 aa8□□□□□ -1.13
RNU4ATAC-201ENST00000580972 CRYBG1Q9Y4K1 1723 aa8□□□□□ -1.13
RNU4ATAC-201ENST00000580972 MAP2P11137 1827 aaKnown RBP7.99□□□□□ -1.13
RNU4ATAC-201ENST00000580972 CYP27B1O15528 508 aa7.99□□□□□ -1.13
RNU4ATAC-201ENST00000580972 TATP17735 454 aaPredicted RBP7.99□□□□□ -1.13
RNU4ATAC-201ENST00000580972 EVA1CP58658 441 aa7.99□□□□□ -1.13
RNU4ATAC-201ENST00000580972 PLEKHO1Q53GL0 409 aaPredicted RBP7.99□□□□□ -1.13
RNU4ATAC-201ENST00000580972 EXOC6Q8TAG9 804 aa7.99□□□□□ -1.13
RNU4ATAC-201ENST00000580972 RAPGEF4Q8WZA2 1011 aa7.99□□□□□ -1.13
RNU4ATAC-201ENST00000580972 RTF1Q92541 710 aaKnown RBP7.99□□□□□ -1.13
RNU4ATAC-201ENST00000580972 COL18A1P39060 1754 aa7.98□□□□□ -1.13
RNU4ATAC-201ENST00000580972 CHL1O00533 1208 aa7.98□□□□□ -1.13
RNU4ATAC-201ENST00000580972 RNMTO43148 476 aaKnown RBP7.98□□□□□ -1.13
RNU4ATAC-201ENST00000580972 GNAI1P63096 354 aa7.98□□□□□ -1.13
RNU4ATAC-201ENST00000580972 SSH1Q8WYL5 1049 aa7.98□□□□□ -1.13
RNU4ATAC-201ENST00000580972 CFAP44Q96MT7 982 aa7.98□□□□□ -1.13
RNU4ATAC-201ENST00000580972 CRBNQ96SW2 442 aa7.98□□□□□ -1.13
RNU4ATAC-201ENST00000580972 CARD10Q9BWT7 1032 aa7.98□□□□□ -1.13
RNU4ATAC-201ENST00000580972 LRP6O75581 1613 aa7.98□□□□□ -1.13
RNU4ATAC-201ENST00000580972 LMO7Q8WWI1 1683 aa7.98□□□□□ -1.13
RNU4ATAC-201ENST00000580972 OVOS2A0A0G2JMS6 1433 aa7.97□□□□□ -1.13
RNU4ATAC-201ENST00000580972 KDM6AO15550 1401 aaPredicted RBP7.97□□□□□ -1.13
RNU4ATAC-201ENST00000580972 PHKG2P15735 406 aa7.97□□□□□ -1.13
RNU4ATAC-201ENST00000580972 AKAP4Q5JQC9 854 aa7.97□□□□□ -1.13
RNU4ATAC-201ENST00000580972 PANK1Q8TE04 598 aa7.97□□□□□ -1.13
RNU4ATAC-201ENST00000580972 C8orf37Q96NL8 207 aa7.97□□□□□ -1.13
RNU4ATAC-201ENST00000580972 TSPYL4Q9UJ04 414 aa7.97□□□□□ -1.13
RNU4ATAC-201ENST00000580972 CEMIPQ8WUJ3 1361 aa7.97□□□□□ -1.13
RNU4ATAC-201ENST00000580972 JCADQ9P266 1359 aa7.97□□□□□ -1.13
RNU4ATAC-201ENST00000580972 FAM208AQ9UK61 1670 aaKnown RBP7.96□□□□□ -1.13
RNU4ATAC-201ENST00000580972 ABCA3Q99758 1704 aa7.96□□□□□ -1.14
RNU4ATAC-201ENST00000580972 HTATSF1O43719 755 aaKnown RBP7.96□□□□□ -1.14
RNU4ATAC-201ENST00000580972 VAMP4O75379 141 aa7.96□□□□□ -1.14
RNU4ATAC-201ENST00000580972 RLBP1P12271 317 aa7.96□□□□□ -1.14
RNU4ATAC-201ENST00000580972 CALD1Q05682 793 aaKnown RBP7.96□□□□□ -1.14
RNU4ATAC-201ENST00000580972 AMOTQ4VCS5 1084 aa7.96□□□□□ -1.14
RNU4ATAC-201ENST00000580972 C1orf141Q5JVX7 400 aa7.96□□□□□ -1.14
RNU4ATAC-201ENST00000580972 DDX54Q8TDD1 881 aaKnown RBP7.96□□□□□ -1.14
RNU4ATAC-201ENST00000580972 NECTIN2Q92692 538 aa7.96□□□□□ -1.14
RNU4ATAC-201ENST00000580972 FRAT1Q92837 279 aaPredicted RBP7.96□□□□□ -1.14
RNU4ATAC-201ENST00000580972 SMC4Q9NTJ3 1288 aa7.96□□□□□ -1.14
RNU4ATAC-201ENST00000580972 ABCC6O95255 1503 aa7.96□□□□□ -1.14
RNU4ATAC-201ENST00000580972 LTN1O94822 1766 aa7.96□□□□□ -1.14
RNU4ATAC-201ENST00000580972 PHLPP1O60346 1717 aa7.95□□□□□ -1.14
RNU4ATAC-201ENST00000580972 IL2RBP14784 551 aa7.95□□□□□ -1.14
RNU4ATAC-201ENST00000580972 SLC39A6Q13433 755 aa7.95□□□□□ -1.14
RNU4ATAC-201ENST00000580972 TWISTNBQ3B726 338 aaPredicted RBP7.95□□□□□ -1.14
RNU4ATAC-201ENST00000580972 ZCRB1Q8TBF4 217 aaKnown RBP7.95□□□□□ -1.14
RNU4ATAC-201ENST00000580972 SPG7Q9UQ90 795 aa7.95□□□□□ -1.14
RNU4ATAC-201ENST00000580972 DISP2A7MBM2 1401 aa7.95□□□□□ -1.14
RNU4ATAC-201ENST00000580972 COL22A1Q8NFW1 1626 aaPredicted RBP7.94□□□□□ -1.14
RNU4ATAC-201ENST00000580972 PRAMEF22A3QJZ6 481 aa7.94□□□□□ -1.14
RNU4ATAC-201ENST00000580972 TAF7Q15545 349 aaPredicted RBP7.94□□□□□ -1.14
RNU4ATAC-201ENST00000580972 B4GALNT3Q6L9W6 998 aa7.94□□□□□ -1.14
RNU4ATAC-201ENST00000580972 MRPL50Q8N5N7 158 aaKnown RBP7.94□□□□□ -1.14
RNU4ATAC-201ENST00000580972 CLUAP1Q96AJ1 413 aa7.94□□□□□ -1.14
RNU4ATAC-201ENST00000580972 NOB1Q9ULX3 412 aaKnown RBP7.94□□□□□ -1.14
RNU4ATAC-201ENST00000580972 CCDC9Q9Y3X0 531 aaKnown RBP7.94□□□□□ -1.14
RNU4ATAC-201ENST00000580972 SLIT2O94813 1529 aa7.93□□□□□ -1.14
RNU4ATAC-201ENST00000580972 CANXP27824 592 aaKnown RBP7.93□□□□□ -1.14
RNU4ATAC-201ENST00000580972 TEFQ10587 303 aa7.93□□□□□ -1.14
RNU4ATAC-201ENST00000580972 IFNL2Q8IZJ0 200 aa7.93□□□□□ -1.14
RNU4ATAC-201ENST00000580972 NGLY1Q96IV0 654 aa7.93□□□□□ -1.14
RNU4ATAC-201ENST00000580972 COG6Q9Y2V7 657 aa7.93□□□□□ -1.14
RNU4ATAC-201ENST00000580972 SPATA31A1Q5TZJ5 1347 aa7.93□□□□□ -1.14
RNU4ATAC-201ENST00000580972 BTBD11A6QL63 1104 aa7.92□□□□□ -1.14
RNU4ATAC-201ENST00000580972 TRIM27P14373 513 aa7.92□□□□□ -1.14
RNU4ATAC-201ENST00000580972 EIF4A1P60842 406 aaKnown RBP7.92□□□□□ -1.14
RNU4ATAC-201ENST00000580972 G2E3Q7L622 706 aa7.92□□□□□ -1.14
RNU4ATAC-201ENST00000580972 SLC52A2Q9HAB3 445 aa7.92□□□□□ -1.14
RNU4ATAC-201ENST00000580972 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.92□□□□□ -1.14
RNU4ATAC-201ENST00000580972 SPATA31A5Q5VU36 1347 aa7.92□□□□□ -1.14
RNU4ATAC-201ENST00000580972 SPATA31A7Q8IWB4 1347 aa7.92□□□□□ -1.14
RNU4ATAC-201ENST00000580972 BCL9LQ86UU0 1499 aa7.92□□□□□ -1.14
RNU4ATAC-201ENST00000580972 LRRC37A3O60309 1634 aa7.92□□□□□ -1.14
RNU4ATAC-201ENST00000580972 RGPD2P0DJD1 1756 aa7.92□□□□□ -1.14
RNU4ATAC-201ENST00000580972 ANXA1P04083 346 aa7.91□□□□□ -1.14
RNU4ATAC-201ENST00000580972 CT47B1P0C2W7 299 aaPredicted RBP7.91□□□□□ -1.14
RNU4ATAC-201ENST00000580972 FAM98CQ17RN3 349 aaKnown RBP7.91□□□□□ -1.14
RNU4ATAC-201ENST00000580972 MEX3CQ5U5Q3 659 aaKnown RBP7.91□□□□□ -1.14
RNU4ATAC-201ENST00000580972 UNC5CLQ8IV45 518 aa7.91□□□□□ -1.14
RNU4ATAC-201ENST00000580972 NFATC2IPQ8NCF5 419 aa7.91□□□□□ -1.14
RNU4ATAC-201ENST00000580972 PCDH11XQ9BZA7 1347 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms