RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 ZCRB1Q8TBF4 217 aaKnown RBP14.44□□□□□ -0.1
GGA3-210ENST00000580799 SYTL4Q96C24 671 aaPredicted RBP14.44□□□□□ -0.1
GGA3-210ENST00000580799 TUBGCP6Q96RT7 1819 aa14.43□□□□□ -0.1
GGA3-210ENST00000580799 SMG6Q86US8 1419 aaKnown RBP14.43□□□□□ -0.1
GGA3-210ENST00000580799 MEGF6O75095 1541 aa14.43□□□□□ -0.1
GGA3-210ENST00000580799 PRIM1P49642 420 aaKnown RBP14.43□□□□□ -0.1
GGA3-210ENST00000580799 ZNF784Q8NCA9 323 aaPredicted RBP14.43□□□□□ -0.1
GGA3-210ENST00000580799 POLD1P28340 1107 aa14.42□□□□□ -0.1
GGA3-210ENST00000580799 TFCP2L1Q9NZI6 479 aa14.42□□□□□ -0.1
GGA3-210ENST00000580799 NSD2O96028 1365 aa14.42□□□□□ -0.1
GGA3-210ENST00000580799 PNPLA7Q6ZV29 1317 aa14.41□□□□□ -0.1
GGA3-210ENST00000580799 KIF20BQ96Q89 1820 aa14.41□□□□□ -0.1
GGA3-210ENST00000580799 TMF1P82094 1093 aa14.41□□□□□ -0.1
GGA3-210ENST00000580799 KIF24Q5T7B8 1368 aa14.4□□□□□ -0.1
GGA3-210ENST00000580799 FYB1O15117 783 aa14.4□□□□□ -0.1
GGA3-210ENST00000580799 FBLN1P23142 703 aa14.4□□□□□ -0.1
GGA3-210ENST00000580799 HMGB2P26583 209 aaKnown RBP14.4□□□□□ -0.1
GGA3-210ENST00000580799 INSRP06213 1382 aa14.39□□□□□ -0.11
GGA3-210ENST00000580799 USP47Q96K76 1375 aa14.39□□□□□ -0.11
GGA3-210ENST00000580799 RAPGEF4Q8WZA2 1011 aa14.39□□□□□ -0.11
GGA3-210ENST00000580799 RRS1Q15050 365 aaKnown RBP14.38□□□□□ -0.11
GGA3-210ENST00000580799 GPR162Q16538 588 aa14.38□□□□□ -0.11
GGA3-210ENST00000580799 CDCA8Q53HL2 280 aa14.38□□□□□ -0.11
GGA3-210ENST00000580799 NBPF6Q5VWK0 638 aa14.38□□□□□ -0.11
GGA3-210ENST00000580799 NBPF4Q96M43 638 aa14.38□□□□□ -0.11
GGA3-210ENST00000580799 GGNBP2Q9H3C7 697 aa14.38□□□□□ -0.11
GGA3-210ENST00000580799 CCNL1Q9UK58 526 aaPredicted RBP14.38□□□□□ -0.11
GGA3-210ENST00000580799 C5P01031 1676 aa14.38□□□□□ -0.11
GGA3-210ENST00000580799 FLT4P35916 1363 aa14.37□□□□□ -0.11
GGA3-210ENST00000580799 TATP17735 454 aaPredicted RBP14.37□□□□□ -0.11
GGA3-210ENST00000580799 KCNQ4P56696 695 aa14.37□□□□□ -0.11
GGA3-210ENST00000580799 PCDH11XQ9BZA7 1347 aa14.37□□□□□ -0.11
GGA3-210ENST00000580799 PCDH11YQ9BZA8 1340 aa14.37□□□□□ -0.11
GGA3-210ENST00000580799 UTRNP46939 3433 aa14.37□□□□□ -0.11
GGA3-210ENST00000580799 KLHL34Q8N239 644 aa14.36□□□□□ -0.11
GGA3-210ENST00000580799 USHBP1Q8N6Y0 703 aa14.35□□□□□ -0.11
GGA3-210ENST00000580799 PKD1L3Q7Z443 1732 aa14.35□□□□□ -0.11
GGA3-210ENST00000580799 HSP90AB2PQ58FF8 381 aa14.34□□□□□ -0.11
GGA3-210ENST00000580799 ANKRD26Q9UPS8 1709 aa14.34□□□□□ -0.11
GGA3-210ENST00000580799 TAF1LQ8IZX4 1826 aa14.34□□□□□ -0.11
GGA3-210ENST00000580799 MSH5O43196 834 aa14.33□□□□□ -0.12
GGA3-210ENST00000580799 FLAD1Q8NFF5 587 aa14.33□□□□□ -0.12
GGA3-210ENST00000580799 COL23A1Q86Y22 540 aaPredicted RBP14.32□□□□□ -0.12
GGA3-210ENST00000580799 PALLDQ8WX93 1383 aa14.32□□□□□ -0.12
GGA3-210ENST00000580799 TOGARAM1Q9Y4F4 1720 aa14.32□□□□□ -0.12
GGA3-210ENST00000580799 NCAPD2Q15021 1401 aa14.32□□□□□ -0.12
GGA3-210ENST00000580799 ITGB4P16144 1822 aa14.31□□□□□ -0.12
GGA3-210ENST00000580799 GRIN3BO60391 1043 aa14.31□□□□□ -0.12
GGA3-210ENST00000580799 C1QTNF8P60827 252 aa14.31□□□□□ -0.12
GGA3-210ENST00000580799 PELP1Q8IZL8 1130 aaKnown RBP14.31□□□□□ -0.12
GGA3-210ENST00000580799 NLGN2Q8NFZ4 835 aa14.31□□□□□ -0.12
GGA3-210ENST00000580799 C4BP0C0L5 1744 aa14.3□□□□□ -0.12
GGA3-210ENST00000580799 CYP27B1O15528 508 aa14.3□□□□□ -0.12
GGA3-210ENST00000580799 MPRIPQ6WCQ1 1025 aa14.3□□□□□ -0.12
GGA3-210ENST00000580799 SMARCC1Q92922 1105 aaPredicted RBP14.3□□□□□ -0.12
GGA3-210ENST00000580799 NSD3Q9BZ95 1437 aa14.3□□□□□ -0.12
GGA3-210ENST00000580799 CARD14Q9BXL6 1004 aa14.29□□□□□ -0.12
GGA3-210ENST00000580799 TIMELESSQ9UNS1 1208 aa14.28□□□□□ -0.12
GGA3-210ENST00000580799 SPG7Q9UQ90 795 aa14.28□□□□□ -0.12
GGA3-210ENST00000580799 CD2APQ9Y5K6 639 aa14.28□□□□□ -0.12
GGA3-210ENST00000580799 EMILIN1Q9Y6C2 1016 aa14.28□□□□□ -0.12
GGA3-210ENST00000580799 SENP3-EIF4A1A0A087X0R7 540 aa14.27□□□□□ -0.13
GGA3-210ENST00000580799 GIGYF1O75420 1035 aaPredicted RBP14.27□□□□□ -0.13
GGA3-210ENST00000580799 TRIM26Q12899 539 aaPredicted RBP14.27□□□□□ -0.13
GGA3-210ENST00000580799 NKX1-1Q15270 411 aaPredicted RBP14.27□□□□□ -0.13
GGA3-210ENST00000580799 MSL1Q68DK7 614 aa14.27□□□□□ -0.13
GGA3-210ENST00000580799 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.27□□□□□ -0.134e-6■■□□□ 11.4
GGA3-210ENST00000580799 UBR3Q6ZT12 1888 aa14.27□□□□□ -0.13
GGA3-210ENST00000580799 WASHC2AQ641Q2 1341 aa14.26□□□□□ -0.13
GGA3-210ENST00000580799 YBX3P16989 372 aaKnown RBP eCLIP14.26□□□□□ -0.13
GGA3-210ENST00000580799 AK7Q96M32 723 aa14.26□□□□□ -0.13
GGA3-210ENST00000580799 MAP2P11137 1827 aaKnown RBP14.26□□□□□ -0.13
GGA3-210ENST00000580799 PLEKHG2Q9H7P9 1386 aa14.25□□□□□ -0.13
GGA3-210ENST00000580799 PPM1GO15355 546 aaPredicted RBP14.25□□□□□ -0.13
GGA3-210ENST00000580799 GOLGB1Q14789 3259 aaKnown RBP14.24□□□□□ -0.13
GGA3-210ENST00000580799 PIGBQ92521 554 aa14.24□□□□□ -0.13
GGA3-210ENST00000580799 SSFA2P28290 1259 aa14.23□□□□□ -0.13
GGA3-210ENST00000580799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.22□□□□□ -0.13
GGA3-210ENST00000580799 LOC102724428A0A0B4J2F2 783 aa14.22□□□□□ -0.13
GGA3-210ENST00000580799 SIK1P57059 783 aa14.22□□□□□ -0.13
GGA3-210ENST00000580799 EYA1Q99502 592 aa14.22□□□□□ -0.13
GGA3-210ENST00000580799 TMOD3Q9NYL9 352 aa14.22□□□□□ -0.13
GGA3-210ENST00000580799 CLSPNQ9HAW4 1339 aa14.21□□□□□ -0.13
GGA3-210ENST00000580799 IFNL2Q8IZJ0 200 aa14.21□□□□□ -0.13
GGA3-210ENST00000580799 POLKQ9UBT6 870 aa14.21□□□□□ -0.13
GGA3-210ENST00000580799 ZNF831Q5JPB2 1677 aa14.2□□□□□ -0.14
GGA3-210ENST00000580799 PHF14O94880 888 aa14.2□□□□□ -0.14
GGA3-210ENST00000580799 PHKG2P15735 406 aa14.2□□□□□ -0.14
GGA3-210ENST00000580799 ATP10DQ9P241 1426 aa14.19□□□□□ -0.14
GGA3-210ENST00000580799 AMIGO3Q86WK7 504 aa14.19□□□□□ -0.14
GGA3-210ENST00000580799 LINC00116Q8NCU8 138 aa14.18□□□□□ -0.14
GGA3-210ENST00000580799 ASAP1Q9ULH1 1129 aa14.18□□□□□ -0.14
GGA3-210ENST00000580799 ADCY9O60503 1353 aa14.18□□□□□ -0.14
GGA3-210ENST00000580799 IGSF1Q8N6C5 1336 aa14.17□□□□□ -0.14
GGA3-210ENST00000580799 GNPATO15228 680 aa14.17□□□□□ -0.14
GGA3-210ENST00000580799 ATP6V1AP38606 617 aa14.17□□□□□ -0.14
GGA3-210ENST00000580799 EIF4A2Q14240 407 aaKnown RBP14.17□□□□□ -0.14
GGA3-210ENST00000580799 ITPK1Q13572 414 aa14.16□□□□□ -0.14
GGA3-210ENST00000580799 GPBP1L1Q9HC44 474 aaPredicted RBP14.16□□□□□ -0.14
GGA3-210ENST00000580799 ATG3Q9NT62 314 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms