RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 CRB1P82279 1406 aa18.07■□□□□ 0.48
CDK5RAP3-219ENST00000580670 THUMPD2Q9BTF0 503 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-219ENST00000580670 DUSP27Q5VZP5 1158 aa18.07■□□□□ 0.48
CDK5RAP3-219ENST00000580670 TRMT2AQ8IZ69 625 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-219ENST00000580670 MEGF6O75095 1541 aa18.06■□□□□ 0.48
CDK5RAP3-219ENST00000580670 IL16Q14005 1332 aa18.06■□□□□ 0.48
CDK5RAP3-219ENST00000580670 CALD1Q05682 793 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP3-219ENST00000580670 DCTN1Q14203 1278 aa18.06■□□□□ 0.48
CDK5RAP3-219ENST00000580670 RTF1Q92541 710 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP3-219ENST00000580670 LRP6O75581 1613 aa18.05■□□□□ 0.48
CDK5RAP3-219ENST00000580670 GNAT3A8MTJ3 354 aa18.05■□□□□ 0.48
CDK5RAP3-219ENST00000580670 ZNF530Q6P9A1 599 aaPredicted RBP18.05■□□□□ 0.48
CDK5RAP3-219ENST00000580670 C8orf37Q96NL8 207 aa18.05■□□□□ 0.48
CDK5RAP3-219ENST00000580670 MAP3K5Q99683 1374 aa18.05■□□□□ 0.48
CDK5RAP3-219ENST00000580670 MCM10Q7L590 875 aa18.04■□□□□ 0.48
CDK5RAP3-219ENST00000580670 MYH16Q9H6N6 1097 aa18.04■□□□□ 0.48
CDK5RAP3-219ENST00000580670 USP35Q9P2H5 1018 aa18.04■□□□□ 0.48
CDK5RAP3-219ENST00000580670 NRAPQ86VF7 1730 aa18.04■□□□□ 0.48
CDK5RAP3-219ENST00000580670 SLIT2O94813 1529 aa18.04■□□□□ 0.48
CDK5RAP3-219ENST00000580670 PLEKHG2Q9H7P9 1386 aa18.04■□□□□ 0.48
CDK5RAP3-219ENST00000580670 HTATSF1O43719 755 aaKnown RBP18.04■□□□□ 0.48
CDK5RAP3-219ENST00000580670 NGLY1Q96IV0 654 aa18.04■□□□□ 0.48
CDK5RAP3-219ENST00000580670 NWD2Q9ULI1 1742 aa18.04■□□□□ 0.48
CDK5RAP3-219ENST00000580670 SPG7Q9UQ90 795 aa18.03■□□□□ 0.48
CDK5RAP3-219ENST00000580670 IL2RBP14784 551 aa18.02■□□□□ 0.48
CDK5RAP3-219ENST00000580670 C1orf141Q5JVX7 400 aa18.02■□□□□ 0.48
CDK5RAP3-219ENST00000580670 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.02■□□□□ 0.488e-10■□□□□ 11
CDK5RAP3-219ENST00000580670 AKAP4Q5JQC9 854 aa18.02■□□□□ 0.47
CDK5RAP3-219ENST00000580670 MEX3CQ5U5Q3 659 aaKnown RBP18.02■□□□□ 0.47
CDK5RAP3-219ENST00000580670 LAS1LQ9Y4W2 734 aaKnown RBP18.02■□□□□ 0.47
CDK5RAP3-219ENST00000580670 OVOS2A0A0G2JMS6 1433 aa18.01■□□□□ 0.47
CDK5RAP3-219ENST00000580670 PARP4Q9UKK3 1724 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-219ENST00000580670 TSR2Q969E8 191 aaKnown RBP18■□□□□ 0.47
CDK5RAP3-219ENST00000580670 IFT57Q9NWB7 429 aa18■□□□□ 0.47
CDK5RAP3-219ENST00000580670 FANCIQ9NVI1 1328 aa18■□□□□ 0.47
CDK5RAP3-219ENST00000580670 GNAI1P63096 354 aa17.99■□□□□ 0.47
CDK5RAP3-219ENST00000580670 UNC5CLQ8IV45 518 aa17.99■□□□□ 0.47
CDK5RAP3-219ENST00000580670 PKD1L3Q7Z443 1732 aa17.99■□□□□ 0.47
CDK5RAP3-219ENST00000580670 IL17REQ8NFR9 667 aa17.99■□□□□ 0.47
CDK5RAP3-219ENST00000580670 CFAP44Q96MT7 982 aa17.99■□□□□ 0.47
CDK5RAP3-219ENST00000580670 SUPT16HQ9Y5B9 1047 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP3-219ENST00000580670 ZNF853P0CG23 659 aa17.98■□□□□ 0.47
CDK5RAP3-219ENST00000580670 FNBP4Q8N3X1 1017 aaPredicted RBP17.98■□□□□ 0.47
CDK5RAP3-219ENST00000580670 SPATA31A1Q5TZJ5 1347 aa17.98■□□□□ 0.47
CDK5RAP3-219ENST00000580670 ZCRB1Q8TBF4 217 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-219ENST00000580670 RCAN3Q9UKA8 241 aa17.97■□□□□ 0.47
CDK5RAP3-219ENST00000580670 CCDC9Q9Y3X0 531 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-219ENST00000580670 BCL9LQ86UU0 1499 aa17.97■□□□□ 0.47
CDK5RAP3-219ENST00000580670 PHKG2P15735 406 aa17.96■□□□□ 0.47
CDK5RAP3-219ENST00000580670 MPRIPQ6WCQ1 1025 aa17.96■□□□□ 0.47
CDK5RAP3-219ENST00000580670 IFNL2Q8IZJ0 200 aa17.96■□□□□ 0.47
CDK5RAP3-219ENST00000580670 SPATA31A5Q5VU36 1347 aa17.96■□□□□ 0.47
CDK5RAP3-219ENST00000580670 SPATA31A7Q8IWB4 1347 aa17.96■□□□□ 0.47
CDK5RAP3-219ENST00000580670 LRRC37A3O60309 1634 aa17.96■□□□□ 0.47
CDK5RAP3-219ENST00000580670 LGR6Q9HBX8 967 aa17.96■□□□□ 0.47
CDK5RAP3-219ENST00000580670 MBIPQ9NS73 344 aa17.96■□□□□ 0.47
CDK5RAP3-219ENST00000580670 USP21Q9UK80 565 aa17.96■□□□□ 0.47
CDK5RAP3-219ENST00000580670 THRAP3Q9Y2W1 955 aaKnown RBP17.96■□□□□ 0.47
CDK5RAP3-219ENST00000580670 DISP2A7MBM2 1401 aa17.95■□□□□ 0.46
CDK5RAP3-219ENST00000580670 CYP27B1O15528 508 aa17.95■□□□□ 0.46
CDK5RAP3-219ENST00000580670 CEMIPQ8WUJ3 1361 aa17.95■□□□□ 0.46
CDK5RAP3-219ENST00000580670 PCDH11XQ9BZA7 1347 aa17.95■□□□□ 0.46
CDK5RAP3-219ENST00000580670 PCDH11YQ9BZA8 1340 aa17.95■□□□□ 0.46
CDK5RAP3-219ENST00000580670 CHL1O00533 1208 aa17.94■□□□□ 0.46
CDK5RAP3-219ENST00000580670 RNMTO43148 476 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-219ENST00000580670 EXOSC9Q06265 439 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-219ENST00000580670 VPS72Q15906 364 aa17.94■□□□□ 0.46
CDK5RAP3-219ENST00000580670 WNK3Q9BYP7 1800 aa17.93■□□□□ 0.46
CDK5RAP3-219ENST00000580670 FBXO41Q8TF61 875 aa17.93■□□□□ 0.46
CDK5RAP3-219ENST00000580670 CDCA7Q9BWT1 371 aaPredicted RBP17.93■□□□□ 0.46
CDK5RAP3-219ENST00000580670 VIRMAQ69YN4 1812 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-219ENST00000580670 AFF2P51816 1311 aa17.92■□□□□ 0.46
CDK5RAP3-219ENST00000580670 HSP90AB1P08238 724 aaKnown RBP17.92■□□□□ 0.46
CDK5RAP3-219ENST00000580670 TEFQ10587 303 aa17.92■□□□□ 0.46
CDK5RAP3-219ENST00000580670 TAF7Q15545 349 aaPredicted RBP17.92■□□□□ 0.46
CDK5RAP3-219ENST00000580670 MIS18AQ9NYP9 233 aa17.92■□□□□ 0.46
CDK5RAP3-219ENST00000580670 TSPYL4Q9UJ04 414 aa17.92■□□□□ 0.46
CDK5RAP3-219ENST00000580670 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.92■□□□□ 0.46
CDK5RAP3-219ENST00000580670 DDX54Q8TDD1 881 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP3-219ENST00000580670 KDM6AO15550 1401 aaPredicted RBP17.91■□□□□ 0.46
CDK5RAP3-219ENST00000580670 SHANK3Q9BYB0 1731 aa17.91■□□□□ 0.46
CDK5RAP3-219ENST00000580670 BARGINQ6ZT62 677 aa17.91■□□□□ 0.46
CDK5RAP3-219ENST00000580670 DCAF5Q96JK2 942 aa17.91■□□□□ 0.46
CDK5RAP3-219ENST00000580670 ADAMTS7Q9UKP4 1686 aa17.91■□□□□ 0.46
CDK5RAP3-219ENST00000580670 SCN11AQ9UI33 1791 aa17.9■□□□□ 0.46
CDK5RAP3-219ENST00000580670 EXOC5O00471 708 aa17.89■□□□□ 0.45
CDK5RAP3-219ENST00000580670 CT47B1P0C2W7 299 aaPredicted RBP17.89■□□□□ 0.45
CDK5RAP3-219ENST00000580670 BABAM1Q9NWV8 329 aa17.89■□□□□ 0.45
CDK5RAP3-219ENST00000580670 TNS2Q63HR2 1409 aa17.87■□□□□ 0.45
CDK5RAP3-219ENST00000580670 NKX1-1Q15270 411 aaPredicted RBP17.87■□□□□ 0.45
CDK5RAP3-219ENST00000580670 RNF123Q5XPI4 1314 aa17.87■□□□□ 0.45
CDK5RAP3-219ENST00000580670 BTBD11A6QL63 1104 aa17.86■□□□□ 0.45
CDK5RAP3-219ENST00000580670 NEFLP07196 543 aa17.86■□□□□ 0.45
CDK5RAP3-219ENST00000580670 DDB1Q16531 1140 aa17.86■□□□□ 0.45
CDK5RAP3-219ENST00000580670 FAM98CQ17RN3 349 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP3-219ENST00000580670 C8orf58Q8NAV2 365 aa17.86■□□□□ 0.45
CDK5RAP3-219ENST00000580670 TSPYL6Q8N831 410 aa17.86■□□□□ 0.45
CDK5RAP3-219ENST00000580670 SLC52A2Q9HAB3 445 aa17.86■□□□□ 0.45
CDK5RAP3-219ENST00000580670 SIPA1L3O60292 1781 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-219ENST00000580670 ELL2O00472 640 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms