RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 NLRP13Q86W25 1043 aa11.45□□□□□ -0.58
SMARCE1-217ENST00000580654 LRRC4BQ9NT99 713 aa11.45□□□□□ -0.58
SMARCE1-217ENST00000580654 ADCY9O60503 1353 aa11.44□□□□□ -0.58
SMARCE1-217ENST00000580654 CDCA7Q9BWT1 371 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-217ENST00000580654 CCDC61Q9Y6R9 512 aa11.44□□□□□ -0.58
SMARCE1-217ENST00000580654 TRPM1Q7Z4N2 1603 aa11.44□□□□□ -0.58
SMARCE1-217ENST00000580654 PIK3C2AO00443 1686 aa11.43□□□□□ -0.58
SMARCE1-217ENST00000580654 TNS2Q63HR2 1409 aa11.43□□□□□ -0.58
SMARCE1-217ENST00000580654 PNPLA7Q6ZV29 1317 aa11.42□□□□□ -0.58
SMARCE1-217ENST00000580654 SLC16A10Q8TF71 515 aa11.42□□□□□ -0.58
SMARCE1-217ENST00000580654 ACSBG1Q96GR2 724 aa11.42□□□□□ -0.58
SMARCE1-217ENST00000580654 GPBP1L1Q9HC44 474 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-217ENST00000580654 ABCC6O95255 1503 aa11.41□□□□□ -0.58
SMARCE1-217ENST00000580654 EXOC5O00471 708 aa11.41□□□□□ -0.58
SMARCE1-217ENST00000580654 GRIN3BO60391 1043 aa11.41□□□□□ -0.58
SMARCE1-217ENST00000580654 SLC34A2O95436 690 aa11.41□□□□□ -0.58
SMARCE1-217ENST00000580654 POLD1P28340 1107 aa11.41□□□□□ -0.58
SMARCE1-217ENST00000580654 CARD10Q9BWT7 1032 aa11.41□□□□□ -0.58
SMARCE1-217ENST00000580654 CPSF1Q10570 1443 aaKnown RBP11.41□□□□□ -0.58
SMARCE1-217ENST00000580654 DNAJC5GQ8N7S2 189 aa11.4□□□□□ -0.58
SMARCE1-217ENST00000580654 ZNF526Q8TF50 670 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-217ENST00000580654 USP6P35125 1406 aa11.4□□□□□ -0.58
SMARCE1-217ENST00000580654 PPIP5K1Q6PFW1 1433 aa11.4□□□□□ -0.58
SMARCE1-217ENST00000580654 BRD4O60885 1362 aaPredicted RBP11.4□□□□□ -0.59
SMARCE1-217ENST00000580654 KIF3CO14782 793 aa11.38□□□□□ -0.59
SMARCE1-217ENST00000580654 PRELPP51888 382 aa11.38□□□□□ -0.59
SMARCE1-217ENST00000580654 NLRP6P59044 892 aa11.38□□□□□ -0.59
SMARCE1-217ENST00000580654 ARHGEF25Q86VW2 580 aa11.38□□□□□ -0.59
SMARCE1-217ENST00000580654 PHF12Q96QT6 1004 aa11.38□□□□□ -0.59
SMARCE1-217ENST00000580654 KDM2AQ9Y2K7 1162 aa11.38□□□□□ -0.59
SMARCE1-217ENST00000580654 LY75O60449 1722 aa11.38□□□□□ -0.59
SMARCE1-217ENST00000580654 COL13A1Q5TAT6 717 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-217ENST00000580654 KAT6BQ8WYB5 2073 aa11.37□□□□□ -0.59
SMARCE1-217ENST00000580654 QRICH2Q9H0J4 1663 aa11.36□□□□□ -0.59
SMARCE1-217ENST00000580654 NFAT5O94916 1531 aa11.36□□□□□ -0.59
SMARCE1-217ENST00000580654 KCNQ4P56696 695 aa11.36□□□□□ -0.59
SMARCE1-217ENST00000580654 CCDC7Q96M83 1385 aa11.36□□□□□ -0.59
SMARCE1-217ENST00000580654 WDR90Q96KV7 1748 aa11.35□□□□□ -0.59
SMARCE1-217ENST00000580654 CSB-PGBD3P0DP91 1061 aa11.35□□□□□ -0.59
SMARCE1-217ENST00000580654 DCAF11Q8TEB1 546 aa11.35□□□□□ -0.59
SMARCE1-217ENST00000580654 APLP1P51693 650 aa11.34□□□□□ -0.59
SMARCE1-217ENST00000580654 PCNTO95613 3336 aa11.33□□□□□ -0.6
SMARCE1-217ENST00000580654 SLC27A3Q5K4L6 730 aa11.33□□□□□ -0.6
SMARCE1-217ENST00000580654 CABP2Q9NPB3 220 aa11.33□□□□□ -0.6
SMARCE1-217ENST00000580654 TFCP2L1Q9NZI6 479 aa11.33□□□□□ -0.6
SMARCE1-217ENST00000580654 METRNQ9UJH8 293 aa11.32□□□□□ -0.6
SMARCE1-217ENST00000580654 DOT1LQ8TEK3 1739 aa11.32□□□□□ -0.6
SMARCE1-217ENST00000580654 KIAA1210Q9ULL0 1709 aa11.32□□□□□ -0.6
SMARCE1-217ENST00000580654 SOX12O15370 315 aa11.31□□□□□ -0.6
SMARCE1-217ENST00000580654 SRPK2P78362 688 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-217ENST00000580654 MAMSTRQ6ZN01 415 aa11.31□□□□□ -0.6
SMARCE1-217ENST00000580654 COL23A1Q86Y22 540 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-217ENST00000580654 TNS4Q8IZW8 715 aa11.31□□□□□ -0.6
SMARCE1-217ENST00000580654 CABP1Q9NZU7 370 aa11.31□□□□□ -0.6
SMARCE1-217ENST00000580654 NSD2O96028 1365 aa11.3□□□□□ -0.6
SMARCE1-217ENST00000580654 MSL1Q68DK7 614 aa11.3□□□□□ -0.6
SMARCE1-217ENST00000580654 ASTLQ6HA08 431 aaPredicted RBP11.3□□□□□ -0.6
SMARCE1-217ENST00000580654 CD2APQ9Y5K6 639 aa11.3□□□□□ -0.6
SMARCE1-217ENST00000580654 LTN1O94822 1766 aa11.3□□□□□ -0.6
SMARCE1-217ENST00000580654 CICQ96RK0 1608 aaPredicted RBP11.3□□□□□ -0.6
SMARCE1-217ENST00000580654 C7P10643 843 aa11.29□□□□□ -0.6
SMARCE1-217ENST00000580654 IL2RBP14784 551 aa11.29□□□□□ -0.6
SMARCE1-217ENST00000580654 KCNH5Q8NCM2 988 aa11.29□□□□□ -0.6
SMARCE1-217ENST00000580654 ERBB3P21860 1342 aa11.29□□□□□ -0.6
SMARCE1-217ENST00000580654 TTC21BQ7Z4L5 1316 aa11.29□□□□□ -0.6
SMARCE1-217ENST00000580654 USP54Q70EL1 1684 aa11.28□□□□□ -0.6
SMARCE1-217ENST00000580654 POTEJP0CG39 1038 aa11.28□□□□□ -0.6
SMARCE1-217ENST00000580654 JMYQ8N9B5 988 aa11.28□□□□□ -0.6
SMARCE1-217ENST00000580654 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
SMARCE1-217ENST00000580654 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
SMARCE1-217ENST00000580654 C5P01031 1676 aa11.27□□□□□ -0.6
SMARCE1-217ENST00000580654 TOMM70O94826 608 aa11.27□□□□□ -0.61
SMARCE1-217ENST00000580654 HTRA3P83110 453 aa11.27□□□□□ -0.61
SMARCE1-217ENST00000580654 NLRP2Q9NX02 1062 aa11.27□□□□□ -0.61
SMARCE1-217ENST00000580654 WWC3Q9ULE0 1092 aa11.27□□□□□ -0.61
SMARCE1-217ENST00000580654 TAF1LQ8IZX4 1826 aa11.27□□□□□ -0.61
SMARCE1-217ENST00000580654 NBPF1Q3BBV0 1214 aa11.26□□□□□ -0.61
SMARCE1-217ENST00000580654 LCE2DQ5TA82 110 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-217ENST00000580654 KLRG1Q96E93 195 aa11.26□□□□□ -0.61
SMARCE1-217ENST00000580654 IGSF1Q8N6C5 1336 aa11.26□□□□□ -0.61
SMARCE1-217ENST00000580654 TOGARAM1Q9Y4F4 1720 aa11.26□□□□□ -0.61
SMARCE1-217ENST00000580654 PRIM1P49642 420 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-217ENST00000580654 KIAA1551Q9HCM1 1747 aa11.25□□□□□ -0.61
SMARCE1-217ENST00000580654 CENPJQ9HC77 1338 aaPredicted RBP11.25□□□□□ -0.61
SMARCE1-217ENST00000580654 ANKRD36BQ8N2N9 1353 aa11.25□□□□□ -0.61
SMARCE1-217ENST00000580654 MON2Q7Z3U7 1717 aa11.24□□□□□ -0.61
SMARCE1-217ENST00000580654 ATMINO43313 823 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-217ENST00000580654 DDX54Q8TDD1 881 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-217ENST00000580654 CCNL1Q9UK58 526 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-217ENST00000580654 NMRK2Q9NPI5 230 aa11.23□□□□□ -0.61
SMARCE1-217ENST00000580654 TTC21AQ8NDW8 1320 aa11.23□□□□□ -0.61
SMARCE1-217ENST00000580654 FAM208AQ9UK61 1670 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-217ENST00000580654 AMIGO3Q86WK7 504 aa11.22□□□□□ -0.61
SMARCE1-217ENST00000580654 ANKRD24Q8TF21 1146 aa11.22□□□□□ -0.61
SMARCE1-217ENST00000580654 SYTL4Q96C24 671 aaPredicted RBP11.22□□□□□ -0.61
SMARCE1-217ENST00000580654 MS4A3Q96HJ5 214 aa11.22□□□□□ -0.61
SMARCE1-217ENST00000580654 UBR3Q6ZT12 1888 aa11.21□□□□□ -0.61
SMARCE1-217ENST00000580654 RGPD2P0DJD1 1756 aa11.21□□□□□ -0.61
SMARCE1-217ENST00000580654 KIF13BQ9NQT8 1826 aa11.21□□□□□ -0.62
SMARCE1-217ENST00000580654 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms