RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 NCAPD2Q15021 1401 aa25.4■■□□□ 1.66
PPP4R1-215ENST00000580182 KCNQ2O43526 872 aa25.4■■□□□ 1.66
PPP4R1-215ENST00000580182 TATP17735 454 aaPredicted RBP25.4■■□□□ 1.66
PPP4R1-215ENST00000580182 NPC1L1Q9UHC9 1359 aa25.4■■□□□ 1.66
PPP4R1-215ENST00000580182 BCL11BQ9C0K0 894 aaPredicted RBP25.39■■□□□ 1.66
PPP4R1-215ENST00000580182 MTHFSP49914 203 aa25.37■■□□□ 1.65
PPP4R1-215ENST00000580182 IGSF1Q8N6C5 1336 aa25.34■■□□□ 1.65
PPP4R1-215ENST00000580182 NHSQ6T4R5 1651 aa25.33■■□□□ 1.65
PPP4R1-215ENST00000580182 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.65
PPP4R1-215ENST00000580182 IL13P35225 146 aa25.32■■□□□ 1.64
PPP4R1-215ENST00000580182 PARD3Q8TEW0 1356 aa25.31■■□□□ 1.64
PPP4R1-215ENST00000580182 RREB1Q92766 1687 aa25.3■■□□□ 1.64
PPP4R1-215ENST00000580182 PLSCR1O15162 318 aa25.3■■□□□ 1.64
PPP4R1-215ENST00000580182 CYP27B1O15528 508 aa25.3■■□□□ 1.64
PPP4R1-215ENST00000580182 PKD1L3Q7Z443 1732 aa25.29■■□□□ 1.64
PPP4R1-215ENST00000580182 KAT6BQ8WYB5 2073 aa25.29■■□□□ 1.64
PPP4R1-215ENST00000580182 AEBP1Q8IUX7 1158 aa25.29■■□□□ 1.64
PPP4R1-215ENST00000580182 PCDH11XQ9BZA7 1347 aa25.29■■□□□ 1.64
PPP4R1-215ENST00000580182 PCDH11YQ9BZA8 1340 aa25.29■■□□□ 1.64
PPP4R1-215ENST00000580182 DOT1LQ8TEK3 1739 aa25.28■■□□□ 1.64
PPP4R1-215ENST00000580182 NUP188Q5SRE5 1749 aa25.27■■□□□ 1.64
PPP4R1-215ENST00000580182 PRIM1P49642 420 aaKnown RBP25.27■■□□□ 1.64
PPP4R1-215ENST00000580182 PROM2Q8N271 834 aa25.27■■□□□ 1.64
PPP4R1-215ENST00000580182 BTAF1O14981 1849 aa25.26■■□□□ 1.63
PPP4R1-215ENST00000580182 PSDA5PKW4 1024 aaPredicted RBP25.26■■□□□ 1.63
PPP4R1-215ENST00000580182 SYTL4Q96C24 671 aaPredicted RBP25.26■■□□□ 1.63
PPP4R1-215ENST00000580182 SPG7Q9UQ90 795 aa25.26■■□□□ 1.63
PPP4R1-215ENST00000580182 RGPD3A6NKT7 1758 aaPredicted RBP25.26■■□□□ 1.63
PPP4R1-215ENST00000580182 RGPD4Q7Z3J3 1758 aa25.26■■□□□ 1.63
PPP4R1-215ENST00000580182 SULT6B1Q6IMI4 303 aa25.25■■□□□ 1.63
PPP4R1-215ENST00000580182 DDX10Q13206 875 aaKnown RBP25.24■■□□□ 1.63
PPP4R1-215ENST00000580182 DIAPH1O60610 1272 aaKnown RBP25.23■■□□□ 1.63
PPP4R1-215ENST00000580182 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.23■■□□□ 1.631e-8■□□□□ 9.8
PPP4R1-215ENST00000580182 COL3A1P02461 1466 aaPredicted RBP25.22■■□□□ 1.63
PPP4R1-215ENST00000580182 PPP2R1AP30153 589 aa25.22■■□□□ 1.63
PPP4R1-215ENST00000580182 R3HDM1Q15032 1099 aaKnown RBP25.22■■□□□ 1.63
PPP4R1-215ENST00000580182 TXNRD1Q16881 649 aa25.22■■□□□ 1.63
PPP4R1-215ENST00000580182 TOGARAM1Q9Y4F4 1720 aa25.2■■□□□ 1.62
PPP4R1-215ENST00000580182 KDRP35968 1356 aa25.19■■□□□ 1.62
PPP4R1-215ENST00000580182 HMOX1P09601 288 aa25.19■■□□□ 1.62
PPP4R1-215ENST00000580182 PHKG2P15735 406 aa25.19■■□□□ 1.62
PPP4R1-215ENST00000580182 NKX1-1Q15270 411 aaPredicted RBP25.19■■□□□ 1.62
PPP4R1-215ENST00000580182 IFNL2Q8IZJ0 200 aa25.18■■□□□ 1.62
PPP4R1-215ENST00000580182 PLEKHO1Q53GL0 409 aaPredicted RBP25.17■■□□□ 1.62
PPP4R1-215ENST00000580182 NBPF14Q5TI25 921 aa25.17■■□□□ 1.62
PPP4R1-215ENST00000580182 ANO8Q9HCE9 1232 aaPredicted RBP25.16■■□□□ 1.62
PPP4R1-215ENST00000580182 PLEKHG2Q9H7P9 1386 aa25.16■■□□□ 1.62
PPP4R1-215ENST00000580182 MPRIPQ6WCQ1 1025 aa25.15■■□□□ 1.62
PPP4R1-215ENST00000580182 U2SURPO15042 1029 aaKnown RBP25.14■■□□□ 1.62
PPP4R1-215ENST00000580182 AMOTQ4VCS5 1084 aa25.14■■□□□ 1.62
PPP4R1-215ENST00000580182 ZNF530Q6P9A1 599 aaPredicted RBP25.14■■□□□ 1.62
PPP4R1-215ENST00000580182 LRRC4BQ9NT99 713 aa25.13■■□□□ 1.61
PPP4R1-215ENST00000580182 ITGB4P16144 1822 aa25.13■■□□□ 1.61
PPP4R1-215ENST00000580182 KCNQ4P56696 695 aa25.12■■□□□ 1.61
PPP4R1-215ENST00000580182 CFAP53Q96M91 514 aa25.12■■□□□ 1.61
PPP4R1-215ENST00000580182 PIGBQ92521 554 aa25.1■■□□□ 1.61
PPP4R1-215ENST00000580182 LY75O60449 1722 aa25.08■■□□□ 1.61
PPP4R1-215ENST00000580182 KDM6AO15550 1401 aaPredicted RBP25.07■■□□□ 1.6
PPP4R1-215ENST00000580182 C1orf141Q5JVX7 400 aa25.07■■□□□ 1.6
PPP4R1-215ENST00000580182 SRCAPQ6ZRS2 3230 aa25.07■■□□□ 1.6
PPP4R1-215ENST00000580182 PAPPAQ13219 1627 aa25.06■■□□□ 1.6
PPP4R1-215ENST00000580182 DCAF5Q96JK2 942 aa25.06■■□□□ 1.6
PPP4R1-215ENST00000580182 STK32BQ9NY57 414 aa25.06■■□□□ 1.6
PPP4R1-215ENST00000580182 TMOD3Q9NYL9 352 aa25.06■■□□□ 1.6
PPP4R1-215ENST00000580182 HSP90AB1P08238 724 aaKnown RBP25.05■■□□□ 1.6
PPP4R1-215ENST00000580182 SLC15A2Q16348 729 aa25.05■■□□□ 1.6
PPP4R1-215ENST00000580182 MTHFSDQ2M296 383 aaKnown RBP25.05■■□□□ 1.6
PPP4R1-215ENST00000580182 SLC27A3Q5K4L6 730 aa25.05■■□□□ 1.6
PPP4R1-215ENST00000580182 PALLDQ8WX93 1383 aa25.05■■□□□ 1.6
PPP4R1-215ENST00000580182 ZNF827Q17R98 1081 aa25.04■■□□□ 1.6
PPP4R1-215ENST00000580182 PDGFDQ9GZP0 370 aaPredicted RBP25.04■■□□□ 1.6
PPP4R1-215ENST00000580182 CCNL1Q9UK58 526 aaPredicted RBP25.04■■□□□ 1.6
PPP4R1-215ENST00000580182 RALBP1Q15311 655 aa25.03■■□□□ 1.6
PPP4R1-215ENST00000580182 NUDCQ9Y266 331 aa25.03■■□□□ 1.6
PPP4R1-215ENST00000580182 ERVV-2B6SEH9 535 aa25.02■■□□□ 1.6
PPP4R1-215ENST00000580182 AKAP4Q5JQC9 854 aa25.02■■□□□ 1.6
PPP4R1-215ENST00000580182 ASAP1Q9ULH1 1129 aa25.02■■□□□ 1.6
PPP4R1-215ENST00000580182 U2AF1L5P0DN76 240 aaPredicted RBP25.01■■□□□ 1.59
PPP4R1-215ENST00000580182 U2AF1Q01081 240 aaKnown RBP eCLIP25.01■■□□□ 1.59
PPP4R1-215ENST00000580182 RSPH6AQ9H0K4 717 aa25.01■■□□□ 1.59
PPP4R1-215ENST00000580182 PRKAR2BP31323 418 aa25■■□□□ 1.59
PPP4R1-215ENST00000580182 AKT1S1Q96B36 256 aa25■■□□□ 1.59
PPP4R1-215ENST00000580182 ZNF316A6NFI3 1004 aaPredicted RBP24.99■■□□□ 1.59
PPP4R1-215ENST00000580182 CABP4P57796 275 aa24.99■■□□□ 1.59
PPP4R1-215ENST00000580182 SMARCC1Q92922 1105 aaPredicted RBP24.99■■□□□ 1.59
PPP4R1-215ENST00000580182 PHACTR3Q96KR7 559 aa24.99■■□□□ 1.59
PPP4R1-215ENST00000580182 LGR6Q9HBX8 967 aa24.99■■□□□ 1.59
PPP4R1-215ENST00000580182 ATG3Q9NT62 314 aa24.99■■□□□ 1.59
PPP4R1-215ENST00000580182 CASZ1Q86V15 1759 aa24.97■■□□□ 1.59
PPP4R1-215ENST00000580182 SCN11AQ9UI33 1791 aa24.97■■□□□ 1.59
PPP4R1-215ENST00000580182 NFATC2IPQ8NCF5 419 aa24.96■■□□□ 1.59
PPP4R1-215ENST00000580182 LRP5O75197 1615 aa24.96■■□□□ 1.59
PPP4R1-215ENST00000580182 RNMTO43148 476 aaKnown RBP24.95■■□□□ 1.58
PPP4R1-215ENST00000580182 MYBBP1AQ9BQG0 1328 aaKnown RBP24.94■■□□□ 1.58
PPP4R1-215ENST00000580182 LOC102724428A0A0B4J2F2 783 aa24.93■■□□□ 1.58
PPP4R1-215ENST00000580182 FCHSD2O94868 740 aa24.93■■□□□ 1.58
PPP4R1-215ENST00000580182 SIK1P57059 783 aa24.93■■□□□ 1.58
PPP4R1-215ENST00000580182 GAS2L2Q8NHY3 880 aa24.93■■□□□ 1.58
PPP4R1-215ENST00000580182 C5P01031 1676 aa24.93■■□□□ 1.58
PPP4R1-215ENST00000580182 VIRMAQ69YN4 1812 aaKnown RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms