RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 NR3C2P08235 984 aa8.17□□□□□ -1.1
DDX42-210ENST00000579539 BMP1P13497 986 aa8.17□□□□□ -1.1
DDX42-210ENST00000579539 TIMP2P16035 220 aa8.17□□□□□ -1.1
DDX42-210ENST00000579539 NR5A1Q13285 461 aa8.17□□□□□ -1.1
DDX42-210ENST00000579539 TRMT44Q8IYL2 757 aaKnown RBP8.17□□□□□ -1.1
DDX42-210ENST00000579539 WDR4P57081 412 aaKnown RBP8.16□□□□□ -1.1
DDX42-210ENST00000579539 SEMA3FQ13275 785 aa8.16□□□□□ -1.1
DDX42-210ENST00000579539 ERFEQ4G0M1 354 aa8.16□□□□□ -1.1
DDX42-210ENST00000579539 STK32AQ8WU08 396 aa8.16□□□□□ -1.1
DDX42-210ENST00000579539 OCSTAMPQ9BR26 566 aa8.16□□□□□ -1.1
DDX42-210ENST00000579539 CARD14Q9BXL6 1004 aa8.16□□□□□ -1.1
DDX42-210ENST00000579539 IGSF5Q9NSI5 407 aa8.16□□□□□ -1.1
DDX42-210ENST00000579539 MAP4K5Q9Y4K4 846 aa8.16□□□□□ -1.1
DDX42-210ENST00000579539 ZCCHC6Q5VYS8 1495 aaKnown RBP8.15□□□□□ -1.1
DDX42-210ENST00000579539 ZC3H4Q9UPT8 1303 aaKnown RBP8.15□□□□□ -1.1
DDX42-210ENST00000579539 KANK4Q5T7N3 995 aaPredicted RBP8.15□□□□□ -1.1
DDX42-210ENST00000579539 TMEM164Q5U3C3 297 aa8.15□□□□□ -1.1
DDX42-210ENST00000579539 PHLDB3Q6NSJ2 640 aa8.15□□□□□ -1.1
DDX42-210ENST00000579539 TXNDC2Q86VQ3 553 aa8.15□□□□□ -1.1
DDX42-210ENST00000579539 FANCIQ9NVI1 1328 aa8.14□□□□□ -1.11
DDX42-210ENST00000579539 RBM47A0AV96 593 aaKnown RBP8.14□□□□□ -1.11
DDX42-210ENST00000579539 ELOAQ14241 798 aaKnown RBP8.14□□□□□ -1.11
DDX42-210ENST00000579539 B4GALNT3Q6L9W6 998 aa8.14□□□□□ -1.11
DDX42-210ENST00000579539 KIFC2Q96AC6 838 aa8.14□□□□□ -1.11
DDX42-210ENST00000579539 ITPKCQ96DU7 683 aa8.14□□□□□ -1.11
DDX42-210ENST00000579539 ARHGAP9Q9BRR9 750 aa8.14□□□□□ -1.11
DDX42-210ENST00000579539 ZFAND3Q9H8U3 227 aa8.14□□□□□ -1.11
DDX42-210ENST00000579539 ZIC2O95409 532 aaPredicted RBP8.13□□□□□ -1.11
DDX42-210ENST00000579539 LCE2AQ5TA79 106 aaPredicted RBP8.13□□□□□ -1.11
DDX42-210ENST00000579539 VASH1Q7L8A9 365 aaPredicted RBP8.13□□□□□ -1.11
DDX42-210ENST00000579539 PIK3CDO00329 1044 aa8.12□□□□□ -1.11
DDX42-210ENST00000579539 FSHRP23945 695 aa8.12□□□□□ -1.11
DDX42-210ENST00000579539 TREML4Q6UXN2 200 aa8.12□□□□□ -1.11
DDX42-210ENST00000579539 DNAJC14Q6Y2X3 702 aaPredicted RBP8.12□□□□□ -1.11
DDX42-210ENST00000579539 ZFP42Q96MM3 310 aa8.12□□□□□ -1.11
DDX42-210ENST00000579539 YTHDC1Q96MU7 727 aaKnown RBP8.12□□□□□ -1.11
DDX42-210ENST00000579539 GPSM3Q9Y4H4 160 aa8.12□□□□□ -1.11
DDX42-210ENST00000579539 PTK2Q05397 1052 aa8.11□□□□□ -1.11
DDX42-210ENST00000579539 MRPL14Q6P1L8 145 aaKnown RBP8.11□□□□□ -1.11
DDX42-210ENST00000579539 ZBTB33Q86T24 672 aa8.11□□□□□ -1.11
DDX42-210ENST00000579539 UBE2Q2Q8WVN8 375 aa8.11□□□□□ -1.11
DDX42-210ENST00000579539 KIAA1522Q9P206 1035 aaPredicted RBP8.11□□□□□ -1.11
DDX42-210ENST00000579539 NOM1Q5C9Z4 860 aaKnown RBP8.1□□□□□ -1.11
DDX42-210ENST00000579539 ADAM32Q8TC27 787 aa8.1□□□□□ -1.11
DDX42-210ENST00000579539 SLAIN2Q9P270 581 aa8.1□□□□□ -1.11
DDX42-210ENST00000579539 USP35Q9P2H5 1018 aa8.1□□□□□ -1.11
DDX42-210ENST00000579539 NOVA2Q9UNW9 492 aaKnown RBP8.1□□□□□ -1.11
DDX42-210ENST00000579539 EIF4G2P78344 907 aaKnown RBP eCLIP8.09□□□□□ -1.11
DDX42-210ENST00000579539 NFX1Q12986 1120 aaKnown RBP8.09□□□□□ -1.11
DDX42-210ENST00000579539 RBM19Q9Y4C8 960 aaKnown RBP8.09□□□□□ -1.11
DDX42-210ENST00000579539 USP17L3A6NCW0 530 aa8.08□□□□□ -1.12
DDX42-210ENST00000579539 USP17L4A6NCW7 530 aa8.08□□□□□ -1.12
DDX42-210ENST00000579539 SCARF1Q14162 830 aa8.08□□□□□ -1.12
DDX42-210ENST00000579539 USP17L2Q6R6M4 530 aa8.08□□□□□ -1.12
DDX42-210ENST00000579539 USP17L1Q7RTZ2 530 aa8.08□□□□□ -1.12
DDX42-210ENST00000579539 CCDC116Q8IYX3 515 aa8.08□□□□□ -1.12
DDX42-210ENST00000579539 PNMA1Q8ND90 353 aa8.08□□□□□ -1.12
DDX42-210ENST00000579539 SLC10A4Q96EP9 437 aa8.08□□□□□ -1.12
DDX42-210ENST00000579539 PURBQ96QR8 312 aaKnown RBP8.08□□□□□ -1.12
DDX42-210ENST00000579539 KCTD15Q96SI1 283 aaPredicted RBP8.08□□□□□ -1.12
DDX42-210ENST00000579539 NR1H3Q13133 447 aa8.07□□□□□ -1.12
DDX42-210ENST00000579539 CDV3Q9UKY7 258 aaKnown RBP8.07□□□□□ -1.12
DDX42-210ENST00000579539 EMILIN1Q9Y6C2 1016 aa8.07□□□□□ -1.12
DDX42-210ENST00000579539 TERTO14746 1132 aaKnown RBP8.06□□□□□ -1.12
DDX42-210ENST00000579539 WFS1O76024 890 aa8.06□□□□□ -1.12
DDX42-210ENST00000579539 NEFLP07196 543 aa8.06□□□□□ -1.12
DDX42-210ENST00000579539 FBXO45P0C2W1 286 aa8.06□□□□□ -1.12
DDX42-210ENST00000579539 SSFA2P28290 1259 aa8.06□□□□□ -1.12
DDX42-210ENST00000579539 PPP1R26Q5T8A7 1209 aaPredicted RBP8.06□□□□□ -1.12
DDX42-210ENST00000579539 NFATC2IPQ8NCF5 419 aa8.06□□□□□ -1.12
DDX42-210ENST00000579539 MRRFQ96E11 262 aaKnown RBP8.06□□□□□ -1.12
DDX42-210ENST00000579539 WRNQ14191 1432 aaPredicted RBP eCLIP8.05□□□□□ -1.12
DDX42-210ENST00000579539 USP17L5A8MUK1 530 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 USP17L15C9J2P7 530 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 USP17L10C9JJH3 530 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 USP17L13C9JLJ4 530 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 USP17L12C9JPN9 530 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 USP17L11C9JVI0 530 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 USP17L21D6R901 530 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 USP17L18D6R9N7 530 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 USP17L22D6RA61 530 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 USP17L17D6RBQ6 530 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 USP17L19D6RCP7 530 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 USP17L20D6RJB6 530 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 USP17L24Q0WX57 530 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 CRTC2Q53ET0 693 aaPredicted RBP8.05□□□□□ -1.12
DDX42-210ENST00000579539 INTS6LQ5JSJ4 861 aaKnown RBP8.05□□□□□ -1.12
DDX42-210ENST00000579539 LCE2CQ5TA81 110 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 PLEKHM2Q8IWE5 1019 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 MEIOBQ8N635 442 aa8.05□□□□□ -1.12
DDX42-210ENST00000579539 SOWAHDA6NJG2 315 aa8.04□□□□□ -1.12
DDX42-210ENST00000579539 FAM196BA6NMK8 535 aa8.04□□□□□ -1.12
DDX42-210ENST00000579539 FAM69CQ0P6D2 419 aa8.04□□□□□ -1.12
DDX42-210ENST00000579539 C6orf118Q5T5N4 469 aa8.04□□□□□ -1.12
DDX42-210ENST00000579539 SOBPA7XYQ1 873 aa8.03□□□□□ -1.12
DDX42-210ENST00000579539 SKIP12755 728 aa8.03□□□□□ -1.12
DDX42-210ENST00000579539 ZNF16P17020 682 aaPredicted RBP8.03□□□□□ -1.12
DDX42-210ENST00000579539 ERCC3P19447 782 aa8.03□□□□□ -1.12
DDX42-210ENST00000579539 SERPINB4P48594 390 aa8.03□□□□□ -1.12
DDX42-210ENST00000579539 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms