RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 FNBP4Q8N3X1 1017 aaPredicted RBP18.21■□□□□ 0.51
TSEN54-206ENST00000579449 PARP4Q9UKK3 1724 aaKnown RBP18.2■□□□□ 0.5
TSEN54-206ENST00000579449 UNC5CLQ8IV45 518 aa18.2■□□□□ 0.5
TSEN54-206ENST00000579449 PDE3BQ13370 1112 aa18.19■□□□□ 0.5
TSEN54-206ENST00000579449 AMOTQ4VCS5 1084 aa18.19■□□□□ 0.5
TSEN54-206ENST00000579449 USP35Q9P2H5 1018 aa18.19■□□□□ 0.5
TSEN54-206ENST00000579449 BCL9LQ86UU0 1499 aa18.19■□□□□ 0.5
TSEN54-206ENST00000579449 PKD1L3Q7Z443 1732 aa18.18■□□□□ 0.5
TSEN54-206ENST00000579449 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.18■□□□□ 0.5
TSEN54-206ENST00000579449 GOLGA2Q08379 1002 aa18.18■□□□□ 0.5
TSEN54-206ENST00000579449 LMOD3Q0VAK6 560 aa18.18■□□□□ 0.5
TSEN54-206ENST00000579449 WDR63Q8IWG1 891 aa18.18■□□□□ 0.5
TSEN54-206ENST00000579449 CDCA7LQ96GN5 454 aa18.18■□□□□ 0.5
TSEN54-206ENST00000579449 WNK3Q9BYP7 1800 aa18.18■□□□□ 0.5
TSEN54-206ENST00000579449 PLEKHG2Q9H7P9 1386 aa18.17■□□□□ 0.5
TSEN54-206ENST00000579449 IL2RBP14784 551 aa18.17■□□□□ 0.5
TSEN54-206ENST00000579449 ZNF530Q6P9A1 599 aaPredicted RBP18.17■□□□□ 0.5
TSEN54-206ENST00000579449 SPATA31A1Q5TZJ5 1347 aa18.17■□□□□ 0.5
TSEN54-206ENST00000579449 OVOS2A0A0G2JMS6 1433 aa18.16■□□□□ 0.5
TSEN54-206ENST00000579449 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.16■□□□□ 0.5
TSEN54-206ENST00000579449 USP21Q9UK80 565 aa18.16■□□□□ 0.5
TSEN54-206ENST00000579449 SPG7Q9UQ90 795 aa18.16■□□□□ 0.5
TSEN54-206ENST00000579449 AFF2P51816 1311 aa18.16■□□□□ 0.5
TSEN54-206ENST00000579449 SPATA31A5Q5VU36 1347 aa18.16■□□□□ 0.5
TSEN54-206ENST00000579449 SPATA31A7Q8IWB4 1347 aa18.16■□□□□ 0.5
TSEN54-206ENST00000579449 VIRMAQ69YN4 1812 aaKnown RBP18.16■□□□□ 0.5
TSEN54-206ENST00000579449 MAP3K5Q99683 1374 aa18.16■□□□□ 0.5
TSEN54-206ENST00000579449 GNAT3A8MTJ3 354 aa18.15■□□□□ 0.5
TSEN54-206ENST00000579449 DCTN1Q14203 1278 aa18.15■□□□□ 0.5
TSEN54-206ENST00000579449 CCDC9Q9Y3X0 531 aaKnown RBP18.15■□□□□ 0.5
TSEN54-206ENST00000579449 HTATSF1O43719 755 aaKnown RBP18.14■□□□□ 0.49
TSEN54-206ENST00000579449 SLFN5Q08AF3 891 aa18.14■□□□□ 0.49
TSEN54-206ENST00000579449 VPS72Q15906 364 aa18.14■□□□□ 0.49
TSEN54-206ENST00000579449 AKAP4Q5JQC9 854 aa18.14■□□□□ 0.49
TSEN54-206ENST00000579449 RTF1Q92541 710 aaKnown RBP18.14■□□□□ 0.49
TSEN54-206ENST00000579449 THUMPD2Q9BTF0 503 aaKnown RBP18.14■□□□□ 0.49
TSEN54-206ENST00000579449 SPINK5Q9NQ38 1064 aaPredicted RBP18.14■□□□□ 0.49
TSEN54-206ENST00000579449 THRAP3Q9Y2W1 955 aaKnown RBP18.14■□□□□ 0.49
TSEN54-206ENST00000579449 DISP2A7MBM2 1401 aa18.14■□□□□ 0.49
TSEN54-206ENST00000579449 C1orf141Q5JVX7 400 aa18.13■□□□□ 0.49
TSEN54-206ENST00000579449 MCM10Q7L590 875 aa18.13■□□□□ 0.49
TSEN54-206ENST00000579449 ZCRB1Q8TBF4 217 aaKnown RBP18.13■□□□□ 0.49
TSEN54-206ENST00000579449 SHANK3Q9BYB0 1731 aa18.12■□□□□ 0.49
TSEN54-206ENST00000579449 E9PSI1 815 aa18.12■□□□□ 0.49
TSEN54-206ENST00000579449 IL16Q14005 1332 aa18.12■□□□□ 0.49
TSEN54-206ENST00000579449 CALD1Q05682 793 aaKnown RBP18.11■□□□□ 0.49
TSEN54-206ENST00000579449 TRMT2AQ8IZ69 625 aaKnown RBP18.11■□□□□ 0.49
TSEN54-206ENST00000579449 PHKG2P15735 406 aa18.1■□□□□ 0.49
TSEN54-206ENST00000579449 DUSP27Q5VZP5 1158 aa18.1■□□□□ 0.49
TSEN54-206ENST00000579449 BARGINQ6ZT62 677 aa18.1■□□□□ 0.49
TSEN54-206ENST00000579449 IL17REQ8NFR9 667 aa18.1■□□□□ 0.49
TSEN54-206ENST00000579449 LRRC37A3O60309 1634 aa18.09■□□□□ 0.49
TSEN54-206ENST00000579449 CYP27B1O15528 508 aa18.09■□□□□ 0.49
TSEN54-206ENST00000579449 IFNL2Q8IZJ0 200 aa18.09■□□□□ 0.49
TSEN54-206ENST00000579449 CDCA7Q9BWT1 371 aaPredicted RBP18.09■□□□□ 0.49
TSEN54-206ENST00000579449 SCN11AQ9UI33 1791 aa18.09■□□□□ 0.49
TSEN54-206ENST00000579449 ATRNO75882 1429 aa18.08■□□□□ 0.49
TSEN54-206ENST00000579449 PCDH11XQ9BZA7 1347 aa18.08■□□□□ 0.49
TSEN54-206ENST00000579449 PCDH11YQ9BZA8 1340 aa18.08■□□□□ 0.49
TSEN54-206ENST00000579449 RNMTO43148 476 aaKnown RBP18.08■□□□□ 0.48
TSEN54-206ENST00000579449 MPRIPQ6WCQ1 1025 aa18.08■□□□□ 0.48
TSEN54-206ENST00000579449 LGR6Q9HBX8 967 aa18.08■□□□□ 0.48
TSEN54-206ENST00000579449 LAS1LQ9Y4W2 734 aaKnown RBP18.08■□□□□ 0.48
TSEN54-206ENST00000579449 ADAMTS7Q9UKP4 1686 aa18.07■□□□□ 0.48
TSEN54-206ENST00000579449 MYH16Q9H6N6 1097 aa18.07■□□□□ 0.48
TSEN54-206ENST00000579449 IFT57Q9NWB7 429 aa18.07■□□□□ 0.48
TSEN54-206ENST00000579449 TRPC5Q9UL62 973 aaPredicted RBP18.07■□□□□ 0.48
TSEN54-206ENST00000579449 CEMIPQ8WUJ3 1361 aa18.06■□□□□ 0.48
TSEN54-206ENST00000579449 EXOC5O00471 708 aa18.06■□□□□ 0.48
TSEN54-206ENST00000579449 ZNF853P0CG23 659 aa18.06■□□□□ 0.48
TSEN54-206ENST00000579449 GNAI1P63096 354 aa18.06■□□□□ 0.48
TSEN54-206ENST00000579449 DDX54Q8TDD1 881 aaKnown RBP18.06■□□□□ 0.48
TSEN54-206ENST00000579449 GLI3P10071 1580 aa18.05■□□□□ 0.48
TSEN54-206ENST00000579449 HSP90AB1P08238 724 aaKnown RBP18.05■□□□□ 0.48
TSEN54-206ENST00000579449 FAM98CQ17RN3 349 aaKnown RBP18.05■□□□□ 0.48
TSEN54-206ENST00000579449 TSR2Q969E8 191 aaKnown RBP18.05■□□□□ 0.48
TSEN54-206ENST00000579449 GJD4Q96KN9 370 aaPredicted RBP18.05■□□□□ 0.48
TSEN54-206ENST00000579449 CFAP44Q96MT7 982 aa18.05■□□□□ 0.48
TSEN54-206ENST00000579449 KDM6AO15550 1401 aaPredicted RBP18.05■□□□□ 0.48
TSEN54-206ENST00000579449 TNS2Q63HR2 1409 aa18.05■□□□□ 0.48
TSEN54-206ENST00000579449 FANCIQ9NVI1 1328 aa18.04■□□□□ 0.48
TSEN54-206ENST00000579449 QTRT2Q9H974 415 aaKnown RBP18.04■□□□□ 0.48
TSEN54-206ENST00000579449 NKX1-1Q15270 411 aaPredicted RBP18.03■□□□□ 0.48
TSEN54-206ENST00000579449 DDB1Q16531 1140 aa18.03■□□□□ 0.48
TSEN54-206ENST00000579449 DCAF5Q96JK2 942 aa18.03■□□□□ 0.48
TSEN54-206ENST00000579449 SIPA1L3O60292 1781 aaPredicted RBP18.03■□□□□ 0.48
TSEN54-206ENST00000579449 CHL1O00533 1208 aa18.02■□□□□ 0.48
TSEN54-206ENST00000579449 TAF7Q15545 349 aaPredicted RBP18.02■□□□□ 0.48
TSEN54-206ENST00000579449 MBIPQ9NS73 344 aa18.02■□□□□ 0.48
TSEN54-206ENST00000579449 THSD7AQ9UPZ6 1657 aa18.02■□□□□ 0.47
TSEN54-206ENST00000579449 TEFQ10587 303 aa18.01■□□□□ 0.47
TSEN54-206ENST00000579449 ZNF772Q68DY9 489 aaPredicted RBP18.01■□□□□ 0.47
TSEN54-206ENST00000579449 MIS18AQ9NYP9 233 aa18■□□□□ 0.47
TSEN54-206ENST00000579449 TSPYL4Q9UJ04 414 aa18■□□□□ 0.47
TSEN54-206ENST00000579449 KAT6BQ8WYB5 2073 aa18■□□□□ 0.47
TSEN54-206ENST00000579449 TOGARAM1Q9Y4F4 1720 aa17.99■□□□□ 0.47
TSEN54-206ENST00000579449 A0A0G2JS52 829 aa17.99■□□□□ 0.47
TSEN54-206ENST00000579449 MYT1Q01538 1121 aa17.99■□□□□ 0.47
TSEN54-206ENST00000579449 EXOSC9Q06265 439 aaKnown RBP17.99■□□□□ 0.47
TSEN54-206ENST00000579449 SLC52A2Q9HAB3 445 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms