RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 TATP17735 454 aaPredicted RBP32.54■■■□□ 2.8
LIMD2-207ENST00000579329 ZEB1P37275 1124 aaPredicted RBP32.54■■■□□ 2.8
LIMD2-207ENST00000579329 EIF4A2Q14240 407 aaKnown RBP32.54■■■□□ 2.8
LIMD2-207ENST00000579329 ZCRB1Q8TBF4 217 aaKnown RBP32.53■■■□□ 2.8
LIMD2-207ENST00000579329 EYA1Q99502 592 aa32.52■■■□□ 2.8
LIMD2-207ENST00000579329 BCL11BQ9C0K0 894 aaPredicted RBP32.52■■■□□ 2.8
LIMD2-207ENST00000579329 PARD3Q8TEW0 1356 aa32.51■■■□□ 2.79
LIMD2-207ENST00000579329 DDX54Q8TDD1 881 aaKnown RBP32.51■■■□□ 2.79
LIMD2-207ENST00000579329 SHANK3Q9BYB0 1731 aa32.49■■■□□ 2.79
LIMD2-207ENST00000579329 NHSQ6T4R5 1651 aa32.47■■■□□ 2.79
LIMD2-207ENST00000579329 CNGB1Q14028 1251 aaPredicted RBP32.46■■■□□ 2.79
LIMD2-207ENST00000579329 IGSF1Q8N6C5 1336 aa32.45■■■□□ 2.78
LIMD2-207ENST00000579329 MTHFSP49914 203 aa32.44■■■□□ 2.78
LIMD2-207ENST00000579329 PTF1AQ7RTS3 328 aa32.44■■■□□ 2.78
LIMD2-207ENST00000579329 ACSBG1Q96GR2 724 aa32.44■■■□□ 2.78
LIMD2-207ENST00000579329 PCDH11XQ9BZA7 1347 aa32.43■■■□□ 2.78
LIMD2-207ENST00000579329 PCDH11YQ9BZA8 1340 aa32.43■■■□□ 2.78
LIMD2-207ENST00000579329 RGPD3A6NKT7 1758 aaPredicted RBP32.42■■■□□ 2.78
LIMD2-207ENST00000579329 RGPD4Q7Z3J3 1758 aa32.42■■■□□ 2.78
LIMD2-207ENST00000579329 PKD1L3Q7Z443 1732 aa32.42■■■□□ 2.78
LIMD2-207ENST00000579329 PLSCR1O15162 318 aa32.41■■■□□ 2.78
LIMD2-207ENST00000579329 KCNQ2O43526 872 aa32.41■■■□□ 2.78
LIMD2-207ENST00000579329 PLEKHG2Q9H7P9 1386 aa32.38■■■□□ 2.77
LIMD2-207ENST00000579329 SPG7Q9UQ90 795 aa32.38■■■□□ 2.77
LIMD2-207ENST00000579329 IL13P35225 146 aa32.37■■■□□ 2.77
LIMD2-207ENST00000579329 NBPF14Q5TI25 921 aa32.36■■■□□ 2.77
LIMD2-207ENST00000579329 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.36■■■□□ 2.77
LIMD2-207ENST00000579329 DOT1LQ8TEK3 1739 aa32.36■■■□□ 2.77
LIMD2-207ENST00000579329 BTAF1O14981 1849 aa32.33■■■□□ 2.77
LIMD2-207ENST00000579329 CYP27B1O15528 508 aa32.33■■■□□ 2.77
LIMD2-207ENST00000579329 KAT6BQ8WYB5 2073 aa32.31■■■□□ 2.76
LIMD2-207ENST00000579329 DIAPH1O60610 1272 aaKnown RBP32.3■■■□□ 2.76
LIMD2-207ENST00000579329 PRIM1P49642 420 aaKnown RBP32.3■■■□□ 2.76
LIMD2-207ENST00000579329 SYTL4Q96C24 671 aaPredicted RBP32.3■■■□□ 2.76
LIMD2-207ENST00000579329 SULT6B1Q6IMI4 303 aa32.29■■■□□ 2.76
LIMD2-207ENST00000579329 AEBP1Q8IUX7 1158 aa32.29■■■□□ 2.76
LIMD2-207ENST00000579329 KDRP35968 1356 aa32.29■■■□□ 2.76
LIMD2-207ENST00000579329 COL3A1P02461 1466 aaPredicted RBP32.28■■■□□ 2.76
LIMD2-207ENST00000579329 PPP2R1AP30153 589 aa32.25■■■□□ 2.75
LIMD2-207ENST00000579329 NKX1-1Q15270 411 aaPredicted RBP32.25■■■□□ 2.75
LIMD2-207ENST00000579329 TXNRD1Q16881 649 aa32.25■■■□□ 2.75
LIMD2-207ENST00000579329 PLEKHO1Q53GL0 409 aaPredicted RBP32.25■■■□□ 2.75
LIMD2-207ENST00000579329 IFNL2Q8IZJ0 200 aa32.25■■■□□ 2.75
LIMD2-207ENST00000579329 DDX10Q13206 875 aaKnown RBP32.24■■■□□ 2.75
LIMD2-207ENST00000579329 AMOTQ4VCS5 1084 aa32.24■■■□□ 2.75
LIMD2-207ENST00000579329 PROM2Q8N271 834 aa32.24■■■□□ 2.75
LIMD2-207ENST00000579329 CFAP53Q96M91 514 aa32.24■■■□□ 2.75
LIMD2-207ENST00000579329 SPON1Q9HCB6 807 aa32.24■■■□□ 2.75
LIMD2-207ENST00000579329 PHKG2P15735 406 aa32.23■■■□□ 2.75
LIMD2-207ENST00000579329 YY1P25490 414 aa32.23■■■□□ 2.75
LIMD2-207ENST00000579329 PPP1R1BQ9UD71 204 aaPredicted RBP32.23■■■□□ 2.75
LIMD2-207ENST00000579329 TOGARAM1Q9Y4F4 1720 aa32.21■■■□□ 2.75
LIMD2-207ENST00000579329 CASZ1Q86V15 1759 aa32.19■■■□□ 2.74
LIMD2-207ENST00000579329 HMOX1P09601 288 aa32.18■■■□□ 2.74
LIMD2-207ENST00000579329 ZNF530Q6P9A1 599 aaPredicted RBP32.18■■■□□ 2.74
LIMD2-207ENST00000579329 U2SURPO15042 1029 aaKnown RBP32.16■■■□□ 2.74
LIMD2-207ENST00000579329 HSP90AB1P08238 724 aaKnown RBP32.16■■■□□ 2.74
LIMD2-207ENST00000579329 ITGB4P16144 1822 aa32.15■■■□□ 2.74
LIMD2-207ENST00000579329 MPRIPQ6WCQ1 1025 aa32.15■■■□□ 2.74
LIMD2-207ENST00000579329 ANO8Q9HCE9 1232 aaPredicted RBP32.14■■■□□ 2.74
LIMD2-207ENST00000579329 C1orf141Q5JVX7 400 aa32.13■■■□□ 2.73
LIMD2-207ENST00000579329 SLC27A3Q5K4L6 730 aa32.13■■■□□ 2.73
LIMD2-207ENST00000579329 LY75O60449 1722 aa32.12■■■□□ 2.73
LIMD2-207ENST00000579329 NUDCQ9Y266 331 aa32.12■■■□□ 2.73
LIMD2-207ENST00000579329 DCAF5Q96JK2 942 aa32.11■■■□□ 2.73
LIMD2-207ENST00000579329 STK32BQ9NY57 414 aa32.1■■■□□ 2.73
LIMD2-207ENST00000579329 TMOD3Q9NYL9 352 aa32.1■■■□□ 2.73
LIMD2-207ENST00000579329 PAPPAQ13219 1627 aa32.1■■■□□ 2.73
LIMD2-207ENST00000579329 RALBP1Q15311 655 aa32.09■■■□□ 2.73
LIMD2-207ENST00000579329 LRRC4BQ9NT99 713 aa32.09■■■□□ 2.73
LIMD2-207ENST00000579329 DCAF8L1A6NGE4 600 aa32.08■■■□□ 2.73
LIMD2-207ENST00000579329 PIGBQ92521 554 aa32.08■■■□□ 2.73
LIMD2-207ENST00000579329 SMARCC1Q92922 1105 aaPredicted RBP32.07■■■□□ 2.72
LIMD2-207ENST00000579329 KDM6AO15550 1401 aaPredicted RBP32.07■■■□□ 2.72
LIMD2-207ENST00000579329 PALLDQ8WX93 1383 aa32.07■■■□□ 2.72
LIMD2-207ENST00000579329 ERVV-2B6SEH9 535 aa32.06■■■□□ 2.72
LIMD2-207ENST00000579329 PDGFDQ9GZP0 370 aaPredicted RBP32.06■■■□□ 2.72
LIMD2-207ENST00000579329 SLC15A2Q16348 729 aa32.05■■■□□ 2.72
LIMD2-207ENST00000579329 AKAP4Q5JQC9 854 aa32.05■■■□□ 2.72
LIMD2-207ENST00000579329 CCNL1Q9UK58 526 aaPredicted RBP32.05■■■□□ 2.72
LIMD2-207ENST00000579329 MTHFSDQ2M296 383 aaKnown RBP32.02■■■□□ 2.72
LIMD2-207ENST00000579329 U2AF1L5P0DN76 240 aaPredicted RBP32.01■■■□□ 2.71
LIMD2-207ENST00000579329 U2AF1Q01081 240 aaKnown RBP eCLIP32.01■■■□□ 2.71
LIMD2-207ENST00000579329 ZBTB7AO95365 584 aa32■■■□□ 2.71
LIMD2-207ENST00000579329 KCNQ4P56696 695 aa32■■■□□ 2.71
LIMD2-207ENST00000579329 CABP4P57796 275 aa31.99■■■□□ 2.71
LIMD2-207ENST00000579329 RSPH6AQ9H0K4 717 aa31.99■■■□□ 2.71
LIMD2-207ENST00000579329 PRKAR2BP31323 418 aa31.98■■■□□ 2.71
LIMD2-207ENST00000579329 ZNF827Q17R98 1081 aa31.98■■■□□ 2.71
LIMD2-207ENST00000579329 SCN11AQ9UI33 1791 aa31.97■■■□□ 2.71
LIMD2-207ENST00000579329 ZNF316A6NFI3 1004 aaPredicted RBP31.97■■■□□ 2.71
LIMD2-207ENST00000579329 HMGB2P26583 209 aaKnown RBP31.97■■■□□ 2.71
LIMD2-207ENST00000579329 GAS2L2Q8NHY3 880 aa31.97■■■□□ 2.71
LIMD2-207ENST00000579329 AKT1S1Q96B36 256 aa31.97■■■□□ 2.71
LIMD2-207ENST00000579329 MYBBP1AQ9BQG0 1328 aaKnown RBP31.97■■■□□ 2.71
LIMD2-207ENST00000579329 ASAP1Q9ULH1 1129 aa31.96■■■□□ 2.71
LIMD2-207ENST00000579329 FCHSD2O94868 740 aa31.94■■■□□ 2.7
LIMD2-207ENST00000579329 PTGER2P43116 358 aa31.94■■■□□ 2.7
LIMD2-207ENST00000579329 ATG3Q9NT62 314 aa31.94■■■□□ 2.7
LIMD2-207ENST00000579329 ATF5Q9Y2D1 282 aaPredicted RBP31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms