RNA–Protein interactions for RNA: ENST00000579230.1

KCTD2-204, Transcript of potassium channel tetramerization domain containing 2, humanhuman

TSL 1 (best)

Gene KCTD2, Length 950 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD2-204ENST00000579230 LY75O60449 1722 aa13.59□□□□□ -0.23
KCTD2-204ENST00000579230 SHANK3Q9BYB0 1731 aa13.59□□□□□ -0.23
KCTD2-204ENST00000579230 SOX12O15370 315 aa13.59□□□□□ -0.23
KCTD2-204ENST00000579230 CSB-PGBD3P0DP91 1061 aa13.59□□□□□ -0.23
KCTD2-204ENST00000579230 ZNF827Q17R98 1081 aa13.59□□□□□ -0.23
KCTD2-204ENST00000579230 CLEC11AQ9Y240 323 aa13.59□□□□□ -0.23
KCTD2-204ENST00000579230 ACSBG1Q96GR2 724 aa13.58□□□□□ -0.24
KCTD2-204ENST00000579230 LRRC4BQ9NT99 713 aa13.58□□□□□ -0.24
KCTD2-204ENST00000579230 ERBB3P21860 1342 aa13.58□□□□□ -0.24
KCTD2-204ENST00000579230 FAM208AQ9UK61 1670 aaKnown RBP13.57□□□□□ -0.24
KCTD2-204ENST00000579230 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
KCTD2-204ENST00000579230 L3MBTL2Q969R5 705 aa13.57□□□□□ -0.24
KCTD2-204ENST00000579230 ARXQ96QS3 562 aa13.57□□□□□ -0.24
KCTD2-204ENST00000579230 KTN1Q86UP2 1357 aaKnown RBP13.57□□□□□ -0.24
KCTD2-204ENST00000579230 DOT1LQ8TEK3 1739 aa13.56□□□□□ -0.24
KCTD2-204ENST00000579230 RGPD2P0DJD1 1756 aa13.56□□□□□ -0.24
KCTD2-204ENST00000579230 C1QTNF8P60827 252 aa13.56□□□□□ -0.24
KCTD2-204ENST00000579230 CEP350Q5VT06 3117 aa13.56□□□□□ -0.24
KCTD2-204ENST00000579230 SBNO2Q9Y2G9 1366 aa13.56□□□□□ -0.24
KCTD2-204ENST00000579230 SENP3-EIF4A1A0A087X0R7 540 aa13.53□□□□□ -0.24
KCTD2-204ENST00000579230 IL2RBP14784 551 aa13.53□□□□□ -0.24
KCTD2-204ENST00000579230 NME9Q86XW9 330 aa13.52□□□□□ -0.25
KCTD2-204ENST00000579230 NLRP2Q9NX02 1062 aa13.52□□□□□ -0.25
KCTD2-204ENST00000579230 ROCK2O75116 1388 aaKnown RBP13.52□□□□□ -0.25
KCTD2-204ENST00000579230 PNPLA7Q6ZV29 1317 aa13.51□□□□□ -0.25
KCTD2-204ENST00000579230 CLSPNQ9HAW4 1339 aa13.51□□□□□ -0.25
KCTD2-204ENST00000579230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.51□□□□□ -0.25
KCTD2-204ENST00000579230 ANKRD24Q8TF21 1146 aa13.51□□□□□ -0.25
KCTD2-204ENST00000579230 NSD2O96028 1365 aa13.5□□□□□ -0.25
KCTD2-204ENST00000579230 SLC16A10Q8TF71 515 aa13.5□□□□□ -0.25
KCTD2-204ENST00000579230 EDC4Q6P2E9 1401 aaKnown RBP13.49□□□□□ -0.25
KCTD2-204ENST00000579230 TAF1LQ8IZX4 1826 aa13.49□□□□□ -0.25
KCTD2-204ENST00000579230 SIN3AQ96ST3 1273 aa13.49□□□□□ -0.25
KCTD2-204ENST00000579230 GPR162Q16538 588 aa13.48□□□□□ -0.25
KCTD2-204ENST00000579230 SLC27A3Q5K4L6 730 aa13.48□□□□□ -0.25
KCTD2-204ENST00000579230 NLGN2Q8NFZ4 835 aa13.48□□□□□ -0.25
KCTD2-204ENST00000579230 C5P01031 1676 aa13.47□□□□□ -0.25
KCTD2-204ENST00000579230 A0A1W2PP64 1363 aa13.46□□□□□ -0.25
KCTD2-204ENST00000579230 ANKRD36BQ8N2N9 1353 aa13.46□□□□□ -0.25
KCTD2-204ENST00000579230 KCNQ4P56696 695 aa13.46□□□□□ -0.25
KCTD2-204ENST00000579230 IP6K1Q92551 441 aa13.46□□□□□ -0.25
KCTD2-204ENST00000579230 SPDYE4A6NLX3 237 aa13.45□□□□□ -0.26
KCTD2-204ENST00000579230 SLC12A5Q9H2X9 1139 aa13.45□□□□□ -0.26
KCTD2-204ENST00000579230 MEGF6O75095 1541 aa13.44□□□□□ -0.26
KCTD2-204ENST00000579230 GIGYF1O75420 1035 aaPredicted RBP13.44□□□□□ -0.26
KCTD2-204ENST00000579230 YBX3P16989 372 aaKnown RBP eCLIP13.44□□□□□ -0.26
KCTD2-204ENST00000579230 POLD1P28340 1107 aa13.44□□□□□ -0.26
KCTD2-204ENST00000579230 NEUROD1Q13562 356 aa13.44□□□□□ -0.26
KCTD2-204ENST00000579230 DDX54Q8TDD1 881 aaKnown RBP13.44□□□□□ -0.26
KCTD2-204ENST00000579230 TOGARAM1Q9Y4F4 1720 aa13.44□□□□□ -0.26
KCTD2-204ENST00000579230 PRIM1P49642 420 aaKnown RBP13.43□□□□□ -0.26
KCTD2-204ENST00000579230 KLHL34Q8N239 644 aa13.43□□□□□ -0.26
KCTD2-204ENST00000579230 ITGB4P16144 1822 aa13.43□□□□□ -0.26
KCTD2-204ENST00000579230 PRR29P0C7W0 189 aa13.42□□□□□ -0.26
KCTD2-204ENST00000579230 IFFO2Q5TF58 517 aa13.42□□□□□ -0.26
KCTD2-204ENST00000579230 HDGFL2Q7Z4V5 671 aaPredicted RBP13.42□□□□□ -0.26
KCTD2-204ENST00000579230 TFCP2L1Q9NZI6 479 aa13.42□□□□□ -0.26
KCTD2-204ENST00000579230 UBR3Q6ZT12 1888 aa13.42□□□□□ -0.26
KCTD2-204ENST00000579230 COL23A1Q86Y22 540 aaPredicted RBP13.41□□□□□ -0.26
KCTD2-204ENST00000579230 CCER1Q8TC90 406 aaPredicted RBP13.41□□□□□ -0.26
KCTD2-204ENST00000579230 TMC1Q8TDI8 760 aa13.41□□□□□ -0.26
KCTD2-204ENST00000579230 MAP3K19Q56UN5 1328 aa13.4□□□□□ -0.26
KCTD2-204ENST00000579230 PRKAR2AP13861 404 aaKnown RBP13.4□□□□□ -0.26
KCTD2-204ENST00000579230 HOXC9P31274 260 aa13.4□□□□□ -0.26
KCTD2-204ENST00000579230 PELP1Q8IZL8 1130 aaKnown RBP13.4□□□□□ -0.26
KCTD2-204ENST00000579230 LTV1Q96GA3 475 aaPredicted RBP13.4□□□□□ -0.26
KCTD2-204ENST00000579230 PUS7Q96PZ0 661 aaKnown RBP13.4□□□□□ -0.26
KCTD2-204ENST00000579230 TIMELESSQ9UNS1 1208 aa13.4□□□□□ -0.26
KCTD2-204ENST00000579230 MAP2P11137 1827 aaKnown RBP13.39□□□□□ -0.27
KCTD2-204ENST00000579230 FBLN1P23142 703 aa13.39□□□□□ -0.27
KCTD2-204ENST00000579230 SYTL4Q96C24 671 aaPredicted RBP13.39□□□□□ -0.27
KCTD2-204ENST00000579230 ADCY9O60503 1353 aa13.39□□□□□ -0.27
KCTD2-204ENST00000579230 C4BP0C0L5 1744 aa13.39□□□□□ -0.27
KCTD2-204ENST00000579230 ATP10DQ9P241 1426 aa13.39□□□□□ -0.27
KCTD2-204ENST00000579230 ZCRB1Q8TBF4 217 aaKnown RBP13.38□□□□□ -0.27
KCTD2-204ENST00000579230 TERF2IPQ9NYB0 399 aa13.38□□□□□ -0.27
KCTD2-204ENST00000579230 CCNL1Q9UK58 526 aaPredicted RBP13.38□□□□□ -0.27
KCTD2-204ENST00000579230 PKD1L3Q7Z443 1732 aa13.37□□□□□ -0.27
KCTD2-204ENST00000579230 GRIN3BO60391 1043 aa13.37□□□□□ -0.27
KCTD2-204ENST00000579230 CARD11Q9BXL7 1154 aa13.37□□□□□ -0.27
KCTD2-204ENST00000579230 KIF20BQ96Q89 1820 aa13.36□□□□□ -0.27
KCTD2-204ENST00000579230 RTL1A6NKG5 1358 aa13.36□□□□□ -0.27
KCTD2-204ENST00000579230 NBPF6Q5VWK0 638 aa13.36□□□□□ -0.27
KCTD2-204ENST00000579230 NBPF4Q96M43 638 aa13.36□□□□□ -0.27
KCTD2-204ENST00000579230 TESK2Q96S53 571 aa13.36□□□□□ -0.27
KCTD2-204ENST00000579230 TONSLQ96HA7 1378 aa13.35□□□□□ -0.27
KCTD2-204ENST00000579230 USP47Q96K76 1375 aa13.35□□□□□ -0.27
KCTD2-204ENST00000579230 HAX1O00165 279 aa13.35□□□□□ -0.27
KCTD2-204ENST00000579230 MSL1Q68DK7 614 aa13.35□□□□□ -0.27
KCTD2-204ENST00000579230 KIAA1551Q9HCM1 1747 aa13.35□□□□□ -0.27
KCTD2-204ENST00000579230 AMIGO3Q86WK7 504 aa13.34□□□□□ -0.27
KCTD2-204ENST00000579230 CD2APQ9Y5K6 639 aa13.34□□□□□ -0.27
KCTD2-204ENST00000579230 KIF13BQ9NQT8 1826 aa13.34□□□□□ -0.27
KCTD2-204ENST00000579230 CICQ96RK0 1608 aaPredicted RBP13.33□□□□□ -0.28
KCTD2-204ENST00000579230 AMPHP49418 695 aa13.33□□□□□ -0.28
KCTD2-204ENST00000579230 USHBP1Q8N6Y0 703 aa13.33□□□□□ -0.28
KCTD2-204ENST00000579230 COG3Q96JB2 828 aa13.33□□□□□ -0.28
KCTD2-204ENST00000579230 CGNL1Q0VF96 1302 aa13.33□□□□□ -0.28
KCTD2-204ENST00000579230 RRS1Q15050 365 aaKnown RBP13.32□□□□□ -0.28
KCTD2-204ENST00000579230 ANKRD26Q9UPS8 1709 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms