RNA–Protein interactions for RNA: ENST00000579205.5

MSI2-207, Transcript of musashi RNA binding protein 2, humanhuman

TSL 4

Gene MSI2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-207ENST00000579205 PARP4Q9UKK3 1724 aaKnown RBP19.36■□□□□ 0.69
MSI2-207ENST00000579205 ZNF530Q6P9A1 599 aaPredicted RBP19.35■□□□□ 0.69
MSI2-207ENST00000579205 E9PSI1 815 aa19.34■□□□□ 0.69
MSI2-207ENST00000579205 IL2RBP14784 551 aa19.34■□□□□ 0.69
MSI2-207ENST00000579205 MTHFSDQ2M296 383 aaKnown RBP19.34■□□□□ 0.69
MSI2-207ENST00000579205 USP35Q9P2H5 1018 aa19.34■□□□□ 0.69
MSI2-207ENST00000579205 SLIT2O94813 1529 aa19.34■□□□□ 0.69
MSI2-207ENST00000579205 NRAPQ86VF7 1730 aa19.34■□□□□ 0.69
MSI2-207ENST00000579205 MAP3K5Q99683 1374 aa19.33■□□□□ 0.69
MSI2-207ENST00000579205 LRP6O75581 1613 aa19.33■□□□□ 0.69
MSI2-207ENST00000579205 GNAT3A8MTJ3 354 aa19.33■□□□□ 0.68
MSI2-207ENST00000579205 HTATSF1O43719 755 aaKnown RBP19.33■□□□□ 0.68
MSI2-207ENST00000579205 UNC5CLQ8IV45 518 aa19.33■□□□□ 0.68
MSI2-207ENST00000579205 MYH16Q9H6N6 1097 aa19.33■□□□□ 0.68
MSI2-207ENST00000579205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.33■□□□□ 0.687e-9■■■□□ 18.1
MSI2-207ENST00000579205 DLG5Q8TDM6 1919 aa19.32■□□□□ 0.68
MSI2-207ENST00000579205 CDCA7Q9BWT1 371 aaPredicted RBP19.32■□□□□ 0.68
MSI2-207ENST00000579205 IL16Q14005 1332 aa19.31■□□□□ 0.68
MSI2-207ENST00000579205 ZNF521Q96K83 1311 aa19.31■□□□□ 0.68
MSI2-207ENST00000579205 PHF23Q9BUL5 403 aaPredicted RBP19.31■□□□□ 0.68
MSI2-207ENST00000579205 USP21Q9UK80 565 aa19.31■□□□□ 0.68
MSI2-207ENST00000579205 THRAP3Q9Y2W1 955 aaKnown RBP19.31■□□□□ 0.68
MSI2-207ENST00000579205 MEGF6O75095 1541 aa19.3■□□□□ 0.68
MSI2-207ENST00000579205 AKAP4Q5JQC9 854 aa19.3■□□□□ 0.68
MSI2-207ENST00000579205 TRIM35Q9UPQ4 493 aa19.3■□□□□ 0.68
MSI2-207ENST00000579205 OVOS2A0A0G2JMS6 1433 aa19.3■□□□□ 0.68
MSI2-207ENST00000579205 PCDH11XQ9BZA7 1347 aa19.29■□□□□ 0.68
MSI2-207ENST00000579205 PCDH11YQ9BZA8 1340 aa19.29■□□□□ 0.68
MSI2-207ENST00000579205 HSP90AB1P08238 724 aaKnown RBP19.29■□□□□ 0.68
MSI2-207ENST00000579205 FNBP4Q8N3X1 1017 aaPredicted RBP19.29■□□□□ 0.68
MSI2-207ENST00000579205 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.28■□□□□ 0.68
MSI2-207ENST00000579205 GNAI1P63096 354 aa19.28■□□□□ 0.68
MSI2-207ENST00000579205 ZCRB1Q8TBF4 217 aaKnown RBP19.28■□□□□ 0.68
MSI2-207ENST00000579205 SPATA31A1Q5TZJ5 1347 aa19.27■□□□□ 0.68
MSI2-207ENST00000579205 VPS72Q15906 364 aa19.27■□□□□ 0.68
MSI2-207ENST00000579205 IFNL2Q8IZJ0 200 aa19.27■□□□□ 0.68
MSI2-207ENST00000579205 PKD1L3Q7Z443 1732 aa19.27■□□□□ 0.68
MSI2-207ENST00000579205 AFF2P51816 1311 aa19.26■□□□□ 0.67
MSI2-207ENST00000579205 SPATA31A5Q5VU36 1347 aa19.26■□□□□ 0.67
MSI2-207ENST00000579205 SPATA31A7Q8IWB4 1347 aa19.26■□□□□ 0.67
MSI2-207ENST00000579205 SLFN5Q08AF3 891 aa19.26■□□□□ 0.67
MSI2-207ENST00000579205 LAS1LQ9Y4W2 734 aaKnown RBP19.26■□□□□ 0.67
MSI2-207ENST00000579205 MCM10Q7L590 875 aa19.25■□□□□ 0.67
MSI2-207ENST00000579205 CDCA7LQ96GN5 454 aa19.25■□□□□ 0.67
MSI2-207ENST00000579205 IFT57Q9NWB7 429 aa19.25■□□□□ 0.67
MSI2-207ENST00000579205 BCL9LQ86UU0 1499 aa19.24■□□□□ 0.67
MSI2-207ENST00000579205 WNK3Q9BYP7 1800 aa19.24■□□□□ 0.67
MSI2-207ENST00000579205 TEFQ10587 303 aa19.24■□□□□ 0.67
MSI2-207ENST00000579205 A0A0G2JS52 829 aa19.23■□□□□ 0.67
MSI2-207ENST00000579205 MYT1Q01538 1121 aa19.23■□□□□ 0.67
MSI2-207ENST00000579205 TRPC5Q9UL62 973 aaPredicted RBP19.23■□□□□ 0.67
MSI2-207ENST00000579205 EXOC5O00471 708 aa19.22■□□□□ 0.67
MSI2-207ENST00000579205 DCTN1Q14203 1278 aa19.22■□□□□ 0.67
MSI2-207ENST00000579205 BARGINQ6ZT62 677 aa19.22■□□□□ 0.67
MSI2-207ENST00000579205 THUMPD2Q9BTF0 503 aaKnown RBP19.22■□□□□ 0.67
MSI2-207ENST00000579205 DISP2A7MBM2 1401 aa19.21■□□□□ 0.67
MSI2-207ENST00000579205 PHKG2P15735 406 aa19.21■□□□□ 0.67
MSI2-207ENST00000579205 DCAF5Q96JK2 942 aa19.21■□□□□ 0.67
MSI2-207ENST00000579205 CFAP44Q96MT7 982 aa19.21■□□□□ 0.67
MSI2-207ENST00000579205 DDB1Q16531 1140 aa19.2■□□□□ 0.66
MSI2-207ENST00000579205 DUSP27Q5VZP5 1158 aa19.2■□□□□ 0.66
MSI2-207ENST00000579205 MPRIPQ6WCQ1 1025 aa19.2■□□□□ 0.66
MSI2-207ENST00000579205 DDX54Q8TDD1 881 aaKnown RBP19.2■□□□□ 0.66
MSI2-207ENST00000579205 TNS2Q63HR2 1409 aa19.19■□□□□ 0.66
MSI2-207ENST00000579205 LRRC37A3O60309 1634 aa19.19■□□□□ 0.66
MSI2-207ENST00000579205 RNMTO43148 476 aaKnown RBP19.19■□□□□ 0.66
MSI2-207ENST00000579205 ZNF772Q68DY9 489 aaPredicted RBP19.19■□□□□ 0.66
MSI2-207ENST00000579205 BABAM1Q9NWV8 329 aa19.19■□□□□ 0.66
MSI2-207ENST00000579205 FANCIQ9NVI1 1328 aa19.19■□□□□ 0.66
MSI2-207ENST00000579205 TAF7Q15545 349 aaPredicted RBP19.18■□□□□ 0.66
MSI2-207ENST00000579205 TSPYL4Q9UJ04 414 aa19.18■□□□□ 0.66
MSI2-207ENST00000579205 CT47B1P0C2W7 299 aaPredicted RBP19.17■□□□□ 0.66
MSI2-207ENST00000579205 FAM98CQ17RN3 349 aaKnown RBP19.17■□□□□ 0.66
MSI2-207ENST00000579205 TRMT2AQ8IZ69 625 aaKnown RBP19.17■□□□□ 0.66
MSI2-207ENST00000579205 CEMIPQ8WUJ3 1361 aa19.17■□□□□ 0.66
MSI2-207ENST00000579205 ATRNO75882 1429 aa19.17■□□□□ 0.66
MSI2-207ENST00000579205 CYP27B1O15528 508 aa19.16■□□□□ 0.66
MSI2-207ENST00000579205 IL17REQ8NFR9 667 aa19.16■□□□□ 0.66
MSI2-207ENST00000579205 TSR2Q969E8 191 aaKnown RBP19.16■□□□□ 0.66
MSI2-207ENST00000579205 GJD4Q96KN9 370 aaPredicted RBP19.16■□□□□ 0.66
MSI2-207ENST00000579205 SPINK5Q9NQ38 1064 aaPredicted RBP19.16■□□□□ 0.66
MSI2-207ENST00000579205 SCN11AQ9UI33 1791 aa19.15■□□□□ 0.66
MSI2-207ENST00000579205 QTRT2Q9H974 415 aaKnown RBP19.15■□□□□ 0.66
MSI2-207ENST00000579205 RCAN3Q9UKA8 241 aa19.15■□□□□ 0.66
MSI2-207ENST00000579205 VIRMAQ69YN4 1812 aaKnown RBP19.14■□□□□ 0.65
MSI2-207ENST00000579205 CHL1O00533 1208 aa19.14■□□□□ 0.65
MSI2-207ENST00000579205 NEFLP07196 543 aa19.14■□□□□ 0.65
MSI2-207ENST00000579205 ZNF853P0CG23 659 aa19.14■□□□□ 0.65
MSI2-207ENST00000579205 CABP4P57796 275 aa19.14■□□□□ 0.65
MSI2-207ENST00000579205 LGR6Q9HBX8 967 aa19.14■□□□□ 0.65
MSI2-207ENST00000579205 MBIPQ9NS73 344 aa19.14■□□□□ 0.65
MSI2-207ENST00000579205 ERVV-2B6SEH9 535 aa19.13■□□□□ 0.65
MSI2-207ENST00000579205 SHANK3Q9BYB0 1731 aa19.12■□□□□ 0.65
MSI2-207ENST00000579205 ADAMTS7Q9UKP4 1686 aa19.12■□□□□ 0.65
MSI2-207ENST00000579205 KDM6AO15550 1401 aaPredicted RBP19.12■□□□□ 0.65
MSI2-207ENST00000579205 BTBD11A6QL63 1104 aa19.12■□□□□ 0.65
MSI2-207ENST00000579205 EXOSC9Q06265 439 aaKnown RBP19.12■□□□□ 0.65
MSI2-207ENST00000579205 NKX1-1Q15270 411 aaPredicted RBP19.12■□□□□ 0.65
MSI2-207ENST00000579205 CHMP4AQ9BY43 222 aa19.12■□□□□ 0.65
MSI2-207ENST00000579205 SLC52A2Q9HAB3 445 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms