RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 PKD1L3Q7Z443 1732 aa16.43■□□□□ 0.22
GGA3-206ENST00000578773 UBR3Q6ZT12 1888 aa16.42■□□□□ 0.22
GGA3-206ENST00000578773 CD2APQ9Y5K6 639 aa16.42■□□□□ 0.22
GGA3-206ENST00000578773 DCAF11Q8TEB1 546 aa16.41■□□□□ 0.22
GGA3-206ENST00000578773 SMIM5Q71RC9 77 aa16.4■□□□□ 0.22
GGA3-206ENST00000578773 CABP1Q9NZU7 370 aa16.4■□□□□ 0.22
GGA3-206ENST00000578773 KIF13BQ9NQT8 1826 aa16.4■□□□□ 0.22
GGA3-206ENST00000578773 BRCA1P38398 1863 aaKnown RBP16.39■□□□□ 0.22
GGA3-206ENST00000578773 IL2RBP14784 551 aa16.39■□□□□ 0.21
GGA3-206ENST00000578773 SRPK2P78362 688 aaKnown RBP16.39■□□□□ 0.21
GGA3-206ENST00000578773 AMIGO3Q86WK7 504 aa16.39■□□□□ 0.21
GGA3-206ENST00000578773 NLRP2Q9NX02 1062 aa16.38■□□□□ 0.21
GGA3-206ENST00000578773 KIAA1210Q9ULL0 1709 aa16.37■□□□□ 0.21
GGA3-206ENST00000578773 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
GGA3-206ENST00000578773 ERBB3P21860 1342 aa16.37■□□□□ 0.21
GGA3-206ENST00000578773 FAM208AQ9UK61 1670 aaKnown RBP16.37■□□□□ 0.21
GGA3-206ENST00000578773 HSPA1AP0DMV8 641 aaKnown RBP16.36■□□□□ 0.21
GGA3-206ENST00000578773 HSPA1BP0DMV9 641 aaKnown RBP16.36■□□□□ 0.21
GGA3-206ENST00000578773 PRIM1P49642 420 aaKnown RBP16.36■□□□□ 0.21
GGA3-206ENST00000578773 DDX54Q8TDD1 881 aaKnown RBP16.36■□□□□ 0.21
GGA3-206ENST00000578773 CCNL1Q9UK58 526 aaPredicted RBP16.36■□□□□ 0.21
GGA3-206ENST00000578773 C4BP0C0L5 1744 aa16.36■□□□□ 0.21
GGA3-206ENST00000578773 MON2Q7Z3U7 1717 aa16.36■□□□□ 0.21
GGA3-206ENST00000578773 TTC21BQ7Z4L5 1316 aa16.34■□□□□ 0.21
GGA3-206ENST00000578773 RBM46Q8TBY0 533 aaKnown RBP16.33■□□□□ 0.2
GGA3-206ENST00000578773 ANKRD36BQ8N2N9 1353 aa16.33■□□□□ 0.2
GGA3-206ENST00000578773 KCPQ6ZWJ8 1503 aa16.33■□□□□ 0.2
GGA3-206ENST00000578773 TNRC6CQ9HCJ0 1690 aaKnown RBP16.33■□□□□ 0.2
GGA3-206ENST00000578773 SBF1O95248 1867 aa16.33■□□□□ 0.2
GGA3-206ENST00000578773 ITGB4P16144 1822 aa16.32■□□□□ 0.2
GGA3-206ENST00000578773 ARFGEF1Q9Y6D6 1849 aa16.31■□□□□ 0.2
GGA3-206ENST00000578773 PXDNLA1KZ92 1463 aa16.31■□□□□ 0.2
GGA3-206ENST00000578773 NBPF1Q3BBV0 1214 aa16.31■□□□□ 0.2
GGA3-206ENST00000578773 KCNH5Q8NCM2 988 aa16.31■□□□□ 0.2
GGA3-206ENST00000578773 ANKRD24Q8TF21 1146 aa16.3■□□□□ 0.2
GGA3-206ENST00000578773 MAP2P11137 1827 aaKnown RBP16.27■□□□□ 0.2
GGA3-206ENST00000578773 CENPJQ9HC77 1338 aaPredicted RBP16.26■□□□□ 0.19
GGA3-206ENST00000578773 MEGF6O75095 1541 aa16.26■□□□□ 0.19
GGA3-206ENST00000578773 PHF14O94880 888 aa16.25■□□□□ 0.19
GGA3-206ENST00000578773 FSTL1Q12841 308 aa16.25■□□□□ 0.19
GGA3-206ENST00000578773 C16orf71Q8IYS4 520 aaPredicted RBP16.24■□□□□ 0.19
GGA3-206ENST00000578773 BCS1LQ9Y276 419 aa16.24■□□□□ 0.19
GGA3-206ENST00000578773 USP47Q96K76 1375 aa16.24■□□□□ 0.19
GGA3-206ENST00000578773 CCDC88AQ3V6T2 1871 aa16.23■□□□□ 0.19
GGA3-206ENST00000578773 ARHGAP27Q6ZUM4 889 aa16.23■□□□□ 0.19
GGA3-206ENST00000578773 FAM161AQ3B820 660 aa16.22■□□□□ 0.19
GGA3-206ENST00000578773 C9orf131Q5VYM1 1079 aa16.22■□□□□ 0.19
GGA3-206ENST00000578773 LTV1Q96GA3 475 aaPredicted RBP16.22■□□□□ 0.19
GGA3-206ENST00000578773 RRAGCQ9HB90 399 aa16.22■□□□□ 0.19
GGA3-206ENST00000578773 TTC21AQ8NDW8 1320 aa16.21■□□□□ 0.19
GGA3-206ENST00000578773 A0A0G2JLW4 131 aa16.21■□□□□ 0.19
GGA3-206ENST00000578773 NME9Q86XW9 330 aa16.21■□□□□ 0.19
GGA3-206ENST00000578773 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.2■□□□□ 0.18
GGA3-206ENST00000578773 C10orf71Q711Q0 1435 aa16.19■□□□□ 0.18
GGA3-206ENST00000578773 KTN1Q86UP2 1357 aaKnown RBP16.19■□□□□ 0.18
GGA3-206ENST00000578773 PALLDQ8WX93 1383 aa16.19■□□□□ 0.18
GGA3-206ENST00000578773 USP31Q70CQ4 1352 aa16.18■□□□□ 0.18
GGA3-206ENST00000578773 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.18■□□□□ 0.18
GGA3-206ENST00000578773 PCDH10Q9P2E7 1040 aa16.18■□□□□ 0.18
GGA3-206ENST00000578773 C4AP0C0L4 1744 aa16.18■□□□□ 0.18
GGA3-206ENST00000578773 TIAM2Q8IVF5 1701 aa16.18■□□□□ 0.18
GGA3-206ENST00000578773 TNRC18O15417 2968 aaPredicted RBP16.18■□□□□ 0.18
GGA3-206ENST00000578773 FLAD1Q8NFF5 587 aa16.17■□□□□ 0.18
GGA3-206ENST00000578773 CD163L1Q9NR16 1453 aa16.16■□□□□ 0.18
GGA3-206ENST00000578773 PLEKHG2Q9H7P9 1386 aa16.16■□□□□ 0.18
GGA3-206ENST00000578773 FOXN1O15353 648 aa16.16■□□□□ 0.18
GGA3-206ENST00000578773 DPEP1P16444 411 aa16.16■□□□□ 0.18
GGA3-206ENST00000578773 AK7Q96M32 723 aa16.16■□□□□ 0.18
GGA3-206ENST00000578773 MMP10P09238 476 aa16.15■□□□□ 0.18
GGA3-206ENST00000578773 ZCRB1Q8TBF4 217 aaKnown RBP16.15■□□□□ 0.18
GGA3-206ENST00000578773 FCHSD2O94868 740 aa16.14■□□□□ 0.17
GGA3-206ENST00000578773 SMC1BQ8NDV3 1235 aa16.14■□□□□ 0.17
GGA3-206ENST00000578773 VIRMAQ69YN4 1812 aaKnown RBP16.14■□□□□ 0.17
GGA3-206ENST00000578773 RAB3GAP2Q9H2M9 1393 aa16.13■□□□□ 0.17
GGA3-206ENST00000578773 SBNO2Q9Y2G9 1366 aa16.13■□□□□ 0.17
GGA3-206ENST00000578773 LINC00116Q8NCU8 138 aa16.13■□□□□ 0.17
GGA3-206ENST00000578773 ZNF692Q9BU19 519 aaPredicted RBP16.13■□□□□ 0.17
GGA3-206ENST00000578773 RNF181Q9P0P0 153 aa16.13■□□□□ 0.17
GGA3-206ENST00000578773 STAC3Q96MF2 364 aa16.12■□□□□ 0.17
GGA3-206ENST00000578773 KCNA3P22001 575 aa16.11■□□□□ 0.17
GGA3-206ENST00000578773 FBLN1P23142 703 aa16.11■□□□□ 0.17
GGA3-206ENST00000578773 USHBP1Q8N6Y0 703 aa16.11■□□□□ 0.17
GGA3-206ENST00000578773 EVC2Q86UK5 1308 aa16.11■□□□□ 0.17
GGA3-206ENST00000578773 KDM2BQ8NHM5 1336 aa16.11■□□□□ 0.17
GGA3-206ENST00000578773 MPRIPQ6WCQ1 1025 aa16.1■□□□□ 0.17
GGA3-206ENST00000578773 IP6K1Q92551 441 aa16.1■□□□□ 0.17
GGA3-206ENST00000578773 MKRN1Q9UHC7 482 aaKnown RBP16.1■□□□□ 0.17
GGA3-206ENST00000578773 SSFA2P28290 1259 aa16.08■□□□□ 0.16
GGA3-206ENST00000578773 TGFB2P61812 414 aa16.08■□□□□ 0.16
GGA3-206ENST00000578773 COL5A3P25940 1745 aaPredicted RBP16.08■□□□□ 0.16
GGA3-206ENST00000578773 MYH14Q7Z406 1995 aaKnown RBP16.07■□□□□ 0.16
GGA3-206ENST00000578773 RASSF7Q02833 373 aa16.07■□□□□ 0.16
GGA3-206ENST00000578773 ITPK1Q13572 414 aa16.07■□□□□ 0.16
GGA3-206ENST00000578773 NSD3Q9BZ95 1437 aa16.07■□□□□ 0.16
GGA3-206ENST00000578773 GNPATO15228 680 aa16.06■□□□□ 0.16
GGA3-206ENST00000578773 DCAF5Q96JK2 942 aa16.05■□□□□ 0.16
GGA3-206ENST00000578773 MAP3K19Q56UN5 1328 aa16.04■□□□□ 0.16
GGA3-206ENST00000578773 HOXC9P31274 260 aa16.04■□□□□ 0.16
GGA3-206ENST00000578773 NBPF6Q5VWK0 638 aa16.04■□□□□ 0.16
GGA3-206ENST00000578773 ABHD8Q96I13 439 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms