RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 TATP17735 454 aaPredicted RBP29.3■■■□□ 2.28
CDC42EP4-203ENST00000578516 TOGARAM1Q9Y4F4 1720 aa29.29■■■□□ 2.28
CDC42EP4-203ENST00000578516 NHSQ6T4R5 1651 aa29.29■■■□□ 2.28
CDC42EP4-203ENST00000578516 DIAPH1O60610 1272 aaKnown RBP29.29■■■□□ 2.28
CDC42EP4-203ENST00000578516 PTF1AQ7RTS3 328 aa29.29■■■□□ 2.28
CDC42EP4-203ENST00000578516 DDX54Q8TDD1 881 aaKnown RBP29.29■■■□□ 2.28
CDC42EP4-203ENST00000578516 TRIM37O94972 964 aa29.28■■■□□ 2.28
CDC42EP4-203ENST00000578516 HMOX1P09601 288 aa29.27■■■□□ 2.28
CDC42EP4-203ENST00000578516 SULT6B1Q6IMI4 303 aa29.27■■■□□ 2.28
CDC42EP4-203ENST00000578516 FAM196AQ6ZSG2 479 aa29.27■■■□□ 2.28
CDC42EP4-203ENST00000578516 ZCRB1Q8TBF4 217 aaKnown RBP29.27■■■□□ 2.28
CDC42EP4-203ENST00000578516 ACSBG1Q96GR2 724 aa29.24■■■□□ 2.27
CDC42EP4-203ENST00000578516 KDRP35968 1356 aa29.24■■■□□ 2.27
CDC42EP4-203ENST00000578516 BTAF1O14981 1849 aa29.23■■■□□ 2.27
CDC42EP4-203ENST00000578516 U2SURPO15042 1029 aaKnown RBP29.23■■■□□ 2.27
CDC42EP4-203ENST00000578516 DEFB132Q7Z7B7 95 aa29.23■■■□□ 2.27
CDC42EP4-203ENST00000578516 RALBP1Q15311 655 aa29.22■■■□□ 2.27
CDC42EP4-203ENST00000578516 CYP27B1O15528 508 aa29.21■■■□□ 2.27
CDC42EP4-203ENST00000578516 CFAP53Q96M91 514 aa29.21■■■□□ 2.27
CDC42EP4-203ENST00000578516 PRKRIP1Q9H875 184 aaPredicted RBP29.21■■■□□ 2.27
CDC42EP4-203ENST00000578516 VIRMAQ69YN4 1812 aaKnown RBP29.21■■■□□ 2.27
CDC42EP4-203ENST00000578516 ITGB4P16144 1822 aa29.2■■■□□ 2.27
CDC42EP4-203ENST00000578516 MYBBP1AQ9BQG0 1328 aaKnown RBP29.2■■■□□ 2.26
CDC42EP4-203ENST00000578516 KCNQ2O43526 872 aa29.19■■■□□ 2.26
CDC42EP4-203ENST00000578516 BCL9O00512 1426 aa29.19■■■□□ 2.26
CDC42EP4-203ENST00000578516 PCDH11XQ9BZA7 1347 aa29.18■■■□□ 2.26
CDC42EP4-203ENST00000578516 PCDH11YQ9BZA8 1340 aa29.18■■■□□ 2.26
CDC42EP4-203ENST00000578516 RREB1Q92766 1687 aa29.13■■■□□ 2.25
CDC42EP4-203ENST00000578516 EN1Q05925 392 aaPredicted RBP29.13■■■□□ 2.25
CDC42EP4-203ENST00000578516 SF3B2Q13435 895 aaKnown RBP29.13■■■□□ 2.25
CDC42EP4-203ENST00000578516 SPG7Q9UQ90 795 aa29.13■■■□□ 2.25
CDC42EP4-203ENST00000578516 APBA3O96018 575 aa29.11■■■□□ 2.25
CDC42EP4-203ENST00000578516 NUP188Q5SRE5 1749 aa29.11■■■□□ 2.25
CDC42EP4-203ENST00000578516 U2AF1L5P0DN76 240 aaPredicted RBP29.1■■■□□ 2.25
CDC42EP4-203ENST00000578516 PHKG2P15735 406 aa29.1■■■□□ 2.25
CDC42EP4-203ENST00000578516 U2AF1Q01081 240 aaKnown RBP eCLIP29.1■■■□□ 2.25
CDC42EP4-203ENST00000578516 ZNF530Q6P9A1 599 aaPredicted RBP29.1■■■□□ 2.25
CDC42EP4-203ENST00000578516 CCDC125Q86Z20 511 aa29.1■■■□□ 2.25
CDC42EP4-203ENST00000578516 SCN11AQ9UI33 1791 aa29.09■■■□□ 2.25
CDC42EP4-203ENST00000578516 RSPH6AQ9H0K4 717 aa29.09■■■□□ 2.25
CDC42EP4-203ENST00000578516 RGPD3A6NKT7 1758 aaPredicted RBP29.08■■■□□ 2.25
CDC42EP4-203ENST00000578516 RGPD4Q7Z3J3 1758 aa29.08■■■□□ 2.25
CDC42EP4-203ENST00000578516 SYTL4Q96C24 671 aaPredicted RBP29.08■■■□□ 2.25
CDC42EP4-203ENST00000578516 BCL11BQ9C0K0 894 aaPredicted RBP29.08■■■□□ 2.25
CDC42EP4-203ENST00000578516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.08■■■□□ 2.25
CDC42EP4-203ENST00000578516 KDM6AO15550 1401 aaPredicted RBP29.08■■■□□ 2.25
CDC42EP4-203ENST00000578516 PRKAR2BP31323 418 aa29.07■■■□□ 2.24
CDC42EP4-203ENST00000578516 BAG6P46379 1132 aa29.07■■■□□ 2.24
CDC42EP4-203ENST00000578516 PRIM1P49642 420 aaKnown RBP29.07■■■□□ 2.24
CDC42EP4-203ENST00000578516 EZH2Q15910 746 aaKnown RBP29.07■■■□□ 2.24
CDC42EP4-203ENST00000578516 CCDC184Q52MB2 194 aa29.07■■■□□ 2.24
CDC42EP4-203ENST00000578516 PLEKHO1Q53GL0 409 aaPredicted RBP29.07■■■□□ 2.24
CDC42EP4-203ENST00000578516 NUDCQ9Y266 331 aa29.06■■■□□ 2.24
CDC42EP4-203ENST00000578516 DLG5Q8TDM6 1919 aa29.04■■■□□ 2.24
CDC42EP4-203ENST00000578516 PLEKHG2Q9H7P9 1386 aa29.04■■■□□ 2.24
CDC42EP4-203ENST00000578516 MTHFSDQ2M296 383 aaKnown RBP29.04■■■□□ 2.24
CDC42EP4-203ENST00000578516 IFNL2Q8IZJ0 200 aa29.04■■■□□ 2.24
CDC42EP4-203ENST00000578516 PHACTR3Q96KR7 559 aa29.03■■■□□ 2.24
CDC42EP4-203ENST00000578516 AMOTQ4VCS5 1084 aa29.02■■■□□ 2.24
CDC42EP4-203ENST00000578516 CAMKK2Q96RR4 588 aa29.02■■■□□ 2.24
CDC42EP4-203ENST00000578516 LY75O60449 1722 aa29.01■■■□□ 2.23
CDC42EP4-203ENST00000578516 NKX1-1Q15270 411 aaPredicted RBP29.01■■■□□ 2.23
CDC42EP4-203ENST00000578516 ADAMTS7Q9UKP4 1686 aa29■■■□□ 2.23
CDC42EP4-203ENST00000578516 ANP32CO43423 234 aa28.99■■■□□ 2.23
CDC42EP4-203ENST00000578516 MPRIPQ6WCQ1 1025 aa28.99■■■□□ 2.23
CDC42EP4-203ENST00000578516 C1orf141Q5JVX7 400 aa28.98■■■□□ 2.23
CDC42EP4-203ENST00000578516 PROM2Q8N271 834 aa28.94■■■□□ 2.22
CDC42EP4-203ENST00000578516 FCHSD2O94868 740 aa28.93■■■□□ 2.22
CDC42EP4-203ENST00000578516 AKAP4Q5JQC9 854 aa28.93■■■□□ 2.22
CDC42EP4-203ENST00000578516 PIGBQ92521 554 aa28.93■■■□□ 2.22
CDC42EP4-203ENST00000578516 LGR6Q9HBX8 967 aa28.93■■■□□ 2.22
CDC42EP4-203ENST00000578516 SIPA1L3O60292 1781 aaPredicted RBP28.93■■■□□ 2.22
CDC42EP4-203ENST00000578516 KCNQ4P56696 695 aa28.92■■■□□ 2.22
CDC42EP4-203ENST00000578516 PAPPAQ13219 1627 aa28.91■■■□□ 2.22
CDC42EP4-203ENST00000578516 MAP3K5Q99683 1374 aa28.91■■■□□ 2.22
CDC42EP4-203ENST00000578516 CCDC146Q8IYE0 955 aa28.91■■■□□ 2.22
CDC42EP4-203ENST00000578516 DCAF5Q96JK2 942 aa28.91■■■□□ 2.22
CDC42EP4-203ENST00000578516 PLEKHF1Q96S99 279 aa28.91■■■□□ 2.22
CDC42EP4-203ENST00000578516 MRC1P22897 1456 aa28.91■■■□□ 2.22
CDC42EP4-203ENST00000578516 PLSCR1O15162 318 aa28.9■■■□□ 2.22
CDC42EP4-203ENST00000578516 TXNRD1Q16881 649 aa28.89■■■□□ 2.22
CDC42EP4-203ENST00000578516 TMOD3Q9NYL9 352 aa28.89■■■□□ 2.22
CDC42EP4-203ENST00000578516 TAF1LQ8IZX4 1826 aa28.89■■■□□ 2.22
CDC42EP4-203ENST00000578516 RNMTO43148 476 aaKnown RBP28.88■■■□□ 2.21
CDC42EP4-203ENST00000578516 HSP90AB1P08238 724 aaKnown RBP28.88■■■□□ 2.21
CDC42EP4-203ENST00000578516 GAS2L2Q8NHY3 880 aa28.88■■■□□ 2.21
CDC42EP4-203ENST00000578516 TUBGCP6Q96RT7 1819 aa28.87■■■□□ 2.21
CDC42EP4-203ENST00000578516 WDR43Q15061 677 aaKnown RBP eCLIP28.87■■■□□ 2.21
CDC42EP4-203ENST00000578516 PALLDQ8WX93 1383 aa28.87■■■□□ 2.21
CDC42EP4-203ENST00000578516 C5P01031 1676 aa28.86■■■□□ 2.21
CDC42EP4-203ENST00000578516 ANO8Q9HCE9 1232 aaPredicted RBP28.86■■■□□ 2.21
CDC42EP4-203ENST00000578516 LRRC4BQ9NT99 713 aa28.86■■■□□ 2.21
CDC42EP4-203ENST00000578516 ASAP1Q9ULH1 1129 aa28.86■■■□□ 2.21
CDC42EP4-203ENST00000578516 ADAMTS8Q9UP79 889 aa28.86■■■□□ 2.21
CDC42EP4-203ENST00000578516 CABP4P57796 275 aa28.85■■■□□ 2.21
CDC42EP4-203ENST00000578516 MRS2Q9HD23 443 aa28.84■■■□□ 2.21
CDC42EP4-203ENST00000578516 PSDA5PKW4 1024 aaPredicted RBP28.83■■■□□ 2.21
CDC42EP4-203ENST00000578516 GNAT3A8MTJ3 354 aa28.83■■■□□ 2.21
CDC42EP4-203ENST00000578516 ERVV-2B6SEH9 535 aa28.83■■■□□ 2.21
CDC42EP4-203ENST00000578516 DCTN1Q14203 1278 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms