RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 RRP1P56182 461 aaKnown RBP22.08■■□□□ 1.13
SREBF1-218ENST00000578469 HSP90AB2PQ58FF8 381 aa22.08■■□□□ 1.13
SREBF1-218ENST00000578469 FAM182BQ5T319 152 aa22.08■■□□□ 1.13
SREBF1-218ENST00000578469 RIPK4P57078 832 aa22.07■■□□□ 1.12
SREBF1-218ENST00000578469 R3HDM1Q15032 1099 aaKnown RBP22.07■■□□□ 1.12
SREBF1-218ENST00000578469 PEAK1Q9H792 1746 aa22.06■■□□□ 1.12
SREBF1-218ENST00000578469 MYH16Q9H6N6 1097 aa22.06■■□□□ 1.12
SREBF1-218ENST00000578469 SPATA31A1Q5TZJ5 1347 aa22.06■■□□□ 1.12
SREBF1-218ENST00000578469 KIAA0232Q92628 1395 aa22.05■■□□□ 1.12
SREBF1-218ENST00000578469 NFE2L2Q16236 605 aa22.05■■□□□ 1.12
SREBF1-218ENST00000578469 FAM196AQ6ZSG2 479 aa22.05■■□□□ 1.12
SREBF1-218ENST00000578469 SPINK5Q9NQ38 1064 aaPredicted RBP22.05■■□□□ 1.12
SREBF1-218ENST00000578469 RTL1A6NKG5 1358 aa22.04■■□□□ 1.12
SREBF1-218ENST00000578469 PELP1Q8IZL8 1130 aaKnown RBP22.04■■□□□ 1.12
SREBF1-218ENST00000578469 PHRF1Q9P1Y6 1649 aaKnown RBP22.04■■□□□ 1.12
SREBF1-218ENST00000578469 IL16Q14005 1332 aa22.04■■□□□ 1.12
SREBF1-218ENST00000578469 STRN4Q9NRL3 753 aa22.03■■□□□ 1.12
SREBF1-218ENST00000578469 PPP4R2Q9NY27 417 aa22.03■■□□□ 1.12
SREBF1-218ENST00000578469 HOXC9P31274 260 aa22.02■■□□□ 1.12
SREBF1-218ENST00000578469 LMOD3Q0VAK6 560 aa22.02■■□□□ 1.12
SREBF1-218ENST00000578469 EZH2Q15910 746 aaKnown RBP22.02■■□□□ 1.12
SREBF1-218ENST00000578469 SULT6B1Q6IMI4 303 aa22.02■■□□□ 1.12
SREBF1-218ENST00000578469 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.02■■□□□ 1.12
SREBF1-218ENST00000578469 TRIM35Q9UPQ4 493 aa22.02■■□□□ 1.12
SREBF1-218ENST00000578469 CALD1Q05682 793 aaKnown RBP22.01■■□□□ 1.11
SREBF1-218ENST00000578469 TRIM37O94972 964 aa22■■□□□ 1.11
SREBF1-218ENST00000578469 CHRNA2Q15822 529 aa22■■□□□ 1.11
SREBF1-218ENST00000578469 PHACTR3Q96KR7 559 aa21.99■■□□□ 1.11
SREBF1-218ENST00000578469 SLIT3O75094 1523 aa21.98■■□□□ 1.11
SREBF1-218ENST00000578469 NFAT5O94916 1531 aa21.98■■□□□ 1.11
SREBF1-218ENST00000578469 APBA3O96018 575 aa21.98■■□□□ 1.11
SREBF1-218ENST00000578469 EVA1CP58658 441 aa21.98■■□□□ 1.11
SREBF1-218ENST00000578469 ZC3H6P61129 1189 aaKnown RBP21.98■■□□□ 1.11
SREBF1-218ENST00000578469 IP6K1Q92551 441 aa21.98■■□□□ 1.11
SREBF1-218ENST00000578469 CAMKK2Q96RR4 588 aa21.98■■□□□ 1.11
SREBF1-218ENST00000578469 USP35Q9P2H5 1018 aa21.98■■□□□ 1.11
SREBF1-218ENST00000578469 USP19O94966 1318 aa21.97■■□□□ 1.11
SREBF1-218ENST00000578469 GCP02774 474 aa21.96■■□□□ 1.11
SREBF1-218ENST00000578469 BARGINQ6ZT62 677 aa21.96■■□□□ 1.11
SREBF1-218ENST00000578469 AEBP1Q8IUX7 1158 aa21.95■■□□□ 1.1
SREBF1-218ENST00000578469 IGSF1Q8N6C5 1336 aa21.95■■□□□ 1.1
SREBF1-218ENST00000578469 CT47B1P0C2W7 299 aaPredicted RBP21.94■■□□□ 1.1
SREBF1-218ENST00000578469 NBPF14Q5TI25 921 aa21.94■■□□□ 1.1
SREBF1-218ENST00000578469 EYA1Q99502 592 aa21.94■■□□□ 1.1
SREBF1-218ENST00000578469 RREB1Q92766 1687 aa21.94■■□□□ 1.1
SREBF1-218ENST00000578469 LTN1O94822 1766 aa21.93■■□□□ 1.1
SREBF1-218ENST00000578469 KDRP35968 1356 aa21.92■■□□□ 1.1
SREBF1-218ENST00000578469 ZBTB7CA1YPR0 619 aa21.92■■□□□ 1.1
SREBF1-218ENST00000578469 ARHGEF25Q86VW2 580 aa21.92■■□□□ 1.1
SREBF1-218ENST00000578469 FANCIQ9NVI1 1328 aa21.91■■□□□ 1.1
SREBF1-218ENST00000578469 LTV1Q96GA3 475 aaPredicted RBP21.91■■□□□ 1.1
SREBF1-218ENST00000578469 CPDO75976 1380 aa21.9■■□□□ 1.1
SREBF1-218ENST00000578469 NUP188Q5SRE5 1749 aa21.9■■□□□ 1.1
SREBF1-218ENST00000578469 THRAP3Q9Y2W1 955 aaKnown RBP21.9■■□□□ 1.1
SREBF1-218ENST00000578469 GNAI1P63096 354 aa21.89■■□□□ 1.09
SREBF1-218ENST00000578469 LMO7Q8WWI1 1683 aa21.88■■□□□ 1.09
SREBF1-218ENST00000578469 CAMTA1Q9Y6Y1 1673 aa21.88■■□□□ 1.09
SREBF1-218ENST00000578469 PLIN1O60240 522 aa21.88■■□□□ 1.09
SREBF1-218ENST00000578469 LARP1Q6PKG0 1096 aaKnown RBP21.88■■□□□ 1.09
SREBF1-218ENST00000578469 GAS2L2Q8NHY3 880 aa21.88■■□□□ 1.09
SREBF1-218ENST00000578469 IFT57Q9NWB7 429 aa21.88■■□□□ 1.09
SREBF1-218ENST00000578469 TSR2Q969E8 191 aaKnown RBP21.87■■□□□ 1.09
SREBF1-218ENST00000578469 PPP1R1BQ9UD71 204 aaPredicted RBP21.86■■□□□ 1.09
SREBF1-218ENST00000578469 DCAF8L1A6NGE4 600 aa21.85■■□□□ 1.09
SREBF1-218ENST00000578469 RARSP54136 660 aaKnown RBP21.85■■□□□ 1.09
SREBF1-218ENST00000578469 EXOSC9Q06265 439 aaKnown RBP21.85■■□□□ 1.09
SREBF1-218ENST00000578469 LAS1LQ9Y4W2 734 aaKnown RBP21.85■■□□□ 1.09
SREBF1-218ENST00000578469 PARP4Q9UKK3 1724 aaKnown RBP21.85■■□□□ 1.09
SREBF1-218ENST00000578469 BCAR3O75815 825 aa21.84■■□□□ 1.09
SREBF1-218ENST00000578469 CANXP27824 592 aaKnown RBP21.84■■□□□ 1.09
SREBF1-218ENST00000578469 EXOC6Q8TAG9 804 aa21.84■■□□□ 1.09
SREBF1-218ENST00000578469 COL5A2P05997 1499 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-218ENST00000578469 OVOS2A0A0G2JMS6 1433 aa21.83■■□□□ 1.09
SREBF1-218ENST00000578469 YY1P25490 414 aa21.83■■□□□ 1.09
SREBF1-218ENST00000578469 RTF1Q92541 710 aaKnown RBP21.83■■□□□ 1.09
SREBF1-218ENST00000578469 CCDC136Q96JN2 1154 aa21.83■■□□□ 1.09
SREBF1-218ENST00000578469 SPON1Q9HCB6 807 aa21.83■■□□□ 1.09
SREBF1-218ENST00000578469 DLG5Q8TDM6 1919 aa21.82■■□□□ 1.08
SREBF1-218ENST00000578469 CRB1P82279 1406 aa21.82■■□□□ 1.08
SREBF1-218ENST00000578469 HTATSF1O43719 755 aaKnown RBP21.82■■□□□ 1.08
SREBF1-218ENST00000578469 MTHFSDQ2M296 383 aaKnown RBP21.82■■□□□ 1.08
SREBF1-218ENST00000578469 B4GALNT3Q6L9W6 998 aa21.82■■□□□ 1.08
SREBF1-218ENST00000578469 CFAP44Q96MT7 982 aa21.82■■□□□ 1.08
SREBF1-218ENST00000578469 THUMPD2Q9BTF0 503 aaKnown RBP21.82■■□□□ 1.08
SREBF1-218ENST00000578469 ZNF853P0CG23 659 aa21.81■■□□□ 1.08
SREBF1-218ENST00000578469 ANKRD24Q8TF21 1146 aa21.81■■□□□ 1.08
SREBF1-218ENST00000578469 CRBNQ96SW2 442 aa21.81■■□□□ 1.08
SREBF1-218ENST00000578469 ZNF428Q96B54 188 aa21.8■■□□□ 1.08
SREBF1-218ENST00000578469 RGPD3A6NKT7 1758 aaPredicted RBP21.79■■□□□ 1.08
SREBF1-218ENST00000578469 RGPD4Q7Z3J3 1758 aa21.79■■□□□ 1.08
SREBF1-218ENST00000578469 PDE3AQ14432 1141 aa21.79■■□□□ 1.08
SREBF1-218ENST00000578469 NBPF6Q5VWK0 638 aa21.79■■□□□ 1.08
SREBF1-218ENST00000578469 NBPF4Q96M43 638 aa21.79■■□□□ 1.08
SREBF1-218ENST00000578469 KCNQ2O43526 872 aa21.78■■□□□ 1.08
SREBF1-218ENST00000578469 DCTN1Q14203 1278 aa21.78■■□□□ 1.08
SREBF1-218ENST00000578469 ABCC6O95255 1503 aa21.77■■□□□ 1.08
SREBF1-218ENST00000578469 USHBP1Q8N6Y0 703 aa21.77■■□□□ 1.08
SREBF1-218ENST00000578469 MS4A1P11836 297 aa21.76■■□□□ 1.07
SREBF1-218ENST00000578469 C20orf194Q5TEA3 1177 aa21.76■■□□□ 1.07
SREBF1-218ENST00000578469 FRAT1Q92837 279 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms