RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 DDB1Q16531 1140 aa18.42■□□□□ 0.54
LINC01543-201ENST00000578367 CCDC184Q52MB2 194 aa18.42■□□□□ 0.54
LINC01543-201ENST00000578367 AEBP1Q8IUX7 1158 aa18.42■□□□□ 0.54
LINC01543-201ENST00000578367 SEPT12Q8IYM1 358 aa18.42■□□□□ 0.54
LINC01543-201ENST00000578367 ZCRB1Q8TBF4 217 aaKnown RBP18.42■□□□□ 0.54
LINC01543-201ENST00000578367 HMOX1P09601 288 aa18.41■□□□□ 0.54
LINC01543-201ENST00000578367 ADAMTS8Q9UP79 889 aa18.41■□□□□ 0.54
LINC01543-201ENST00000578367 MEGF6O75095 1541 aa18.4■□□□□ 0.54
LINC01543-201ENST00000578367 PRKAR2BP31323 418 aa18.4■□□□□ 0.54
LINC01543-201ENST00000578367 GAS2L2Q8NHY3 880 aa18.4■□□□□ 0.54
LINC01543-201ENST00000578367 PLEKHF1Q96S99 279 aa18.4■□□□□ 0.54
LINC01543-201ENST00000578367 TNS2Q63HR2 1409 aa18.4■□□□□ 0.54
LINC01543-201ENST00000578367 THSD7AQ9UPZ6 1657 aa18.39■□□□□ 0.53
LINC01543-201ENST00000578367 PCDH11XQ9BZA7 1347 aa18.39■□□□□ 0.53
LINC01543-201ENST00000578367 PCDH11YQ9BZA8 1340 aa18.39■□□□□ 0.53
LINC01543-201ENST00000578367 PDE3BQ13370 1112 aa18.38■□□□□ 0.53
LINC01543-201ENST00000578367 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
LINC01543-201ENST00000578367 RUNDC1Q96C34 613 aa18.38■□□□□ 0.53
LINC01543-201ENST00000578367 A0A0G2JS52 829 aa18.37■□□□□ 0.53
LINC01543-201ENST00000578367 HSP90AB1P08238 724 aaKnown RBP18.37■□□□□ 0.53
LINC01543-201ENST00000578367 MYT1Q01538 1121 aa18.37■□□□□ 0.53
LINC01543-201ENST00000578367 MAPK8IP3Q9UPT6 1336 aa18.37■□□□□ 0.53
LINC01543-201ENST00000578367 BCL9O00512 1426 aa18.37■□□□□ 0.53
LINC01543-201ENST00000578367 RGS12O14924 1447 aa18.36■□□□□ 0.53
LINC01543-201ENST00000578367 KRT27Q7Z3Y8 459 aa18.36■□□□□ 0.53
LINC01543-201ENST00000578367 IFNL2Q8IZJ0 200 aa18.36■□□□□ 0.53
LINC01543-201ENST00000578367 NGEFQ8N5V2 710 aa18.36■□□□□ 0.53
LINC01543-201ENST00000578367 PARP4Q9UKK3 1724 aaKnown RBP18.35■□□□□ 0.53
LINC01543-201ENST00000578367 NKX1-1Q15270 411 aaPredicted RBP18.35■□□□□ 0.53
LINC01543-201ENST00000578367 HTATSF1O43719 755 aaKnown RBP18.34■□□□□ 0.53
LINC01543-201ENST00000578367 AKAP4Q5JQC9 854 aa18.34■□□□□ 0.53
LINC01543-201ENST00000578367 C1orf141Q5JVX7 400 aa18.34■□□□□ 0.53
LINC01543-201ENST00000578367 RGPD2P0DJD1 1756 aa18.33■□□□□ 0.53
LINC01543-201ENST00000578367 MTHFSDQ2M296 383 aaKnown RBP18.33■□□□□ 0.52
LINC01543-201ENST00000578367 CYP27B1O15528 508 aa18.32■□□□□ 0.52
LINC01543-201ENST00000578367 PHKG2P15735 406 aa18.32■□□□□ 0.52
LINC01543-201ENST00000578367 NFE2L2Q16236 605 aa18.32■□□□□ 0.52
LINC01543-201ENST00000578367 ZNF530Q6P9A1 599 aaPredicted RBP18.32■□□□□ 0.52
LINC01543-201ENST00000578367 FAM9BQ8IZU0 186 aa18.32■□□□□ 0.52
LINC01543-201ENST00000578367 PHACTR3Q96KR7 559 aa18.32■□□□□ 0.52
LINC01543-201ENST00000578367 WNK3Q9BYP7 1800 aa18.31■□□□□ 0.52
LINC01543-201ENST00000578367 LMOD3Q0VAK6 560 aa18.31■□□□□ 0.52
LINC01543-201ENST00000578367 FAM196AQ6ZSG2 479 aa18.31■□□□□ 0.52
LINC01543-201ENST00000578367 DCAF5Q96JK2 942 aa18.31■□□□□ 0.52
LINC01543-201ENST00000578367 PKD1L3Q7Z443 1732 aa18.3■□□□□ 0.52
LINC01543-201ENST00000578367 MARCH10Q8NA82 808 aaPredicted RBP18.3■□□□□ 0.52
LINC01543-201ENST00000578367 DDX54Q8TDD1 881 aaKnown RBP18.3■□□□□ 0.52
LINC01543-201ENST00000578367 LRRC37A3O60309 1634 aa18.3■□□□□ 0.52
LINC01543-201ENST00000578367 GNAT3A8MTJ3 354 aa18.29■□□□□ 0.52
LINC01543-201ENST00000578367 MAP3K5Q99683 1374 aa18.29■□□□□ 0.52
LINC01543-201ENST00000578367 TMPOP42166 694 aaKnown RBP18.28■□□□□ 0.52
LINC01543-201ENST00000578367 RTF1Q92541 710 aaKnown RBP18.28■□□□□ 0.52
LINC01543-201ENST00000578367 ERVV-2B6SEH9 535 aa18.27■□□□□ 0.52
LINC01543-201ENST00000578367 CCDC27Q2M243 656 aa18.26■□□□□ 0.51
LINC01543-201ENST00000578367 CCDC146Q8IYE0 955 aa18.26■□□□□ 0.51
LINC01543-201ENST00000578367 APAF1O14727 1248 aa18.25■□□□□ 0.51
LINC01543-201ENST00000578367 RIPK4P57078 832 aa18.25■□□□□ 0.51
LINC01543-201ENST00000578367 CEMIPQ8WUJ3 1361 aa18.23■□□□□ 0.51
LINC01543-201ENST00000578367 RNMTO43148 476 aaKnown RBP18.22■□□□□ 0.51
LINC01543-201ENST00000578367 CALD1Q05682 793 aaKnown RBP18.22■□□□□ 0.51
LINC01543-201ENST00000578367 CCDC125Q86Z20 511 aa18.22■□□□□ 0.51
LINC01543-201ENST00000578367 MPRIPQ6WCQ1 1025 aa18.21■□□□□ 0.51
LINC01543-201ENST00000578367 BCL11BQ9C0K0 894 aaPredicted RBP18.21■□□□□ 0.51
LINC01543-201ENST00000578367 IL17REQ8NFR9 667 aa18.2■□□□□ 0.5
LINC01543-201ENST00000578367 BABAM1Q9NWV8 329 aa18.2■□□□□ 0.5
LINC01543-201ENST00000578367 KDM6AO15550 1401 aaPredicted RBP18.2■□□□□ 0.5
LINC01543-201ENST00000578367 SHANK3Q9BYB0 1731 aa18.2■□□□□ 0.5
LINC01543-201ENST00000578367 TEFQ10587 303 aa18.19■□□□□ 0.5
LINC01543-201ENST00000578367 SLC52A2Q9HAB3 445 aa18.19■□□□□ 0.5
LINC01543-201ENST00000578367 CABP4P57796 275 aa18.18■□□□□ 0.5
LINC01543-201ENST00000578367 TMOD3Q9NYL9 352 aa18.18■□□□□ 0.5
LINC01543-201ENST00000578367 TRIM35Q9UPQ4 493 aa18.18■□□□□ 0.5
LINC01543-201ENST00000578367 HMGB2P26583 209 aaKnown RBP18.17■□□□□ 0.5
LINC01543-201ENST00000578367 PRIM1P49642 420 aaKnown RBP18.17■□□□□ 0.5
LINC01543-201ENST00000578367 LGR6Q9HBX8 967 aa18.17■□□□□ 0.5
LINC01543-201ENST00000578367 MRC1P22897 1456 aa18.17■□□□□ 0.5
LINC01543-201ENST00000578367 ADAMTS7Q9UKP4 1686 aa18.17■□□□□ 0.5
LINC01543-201ENST00000578367 IL16Q14005 1332 aa18.17■□□□□ 0.5
LINC01543-201ENST00000578367 NEUROD2Q15784 382 aa18.16■□□□□ 0.5
LINC01543-201ENST00000578367 WDR63Q8IWG1 891 aa18.16■□□□□ 0.5
LINC01543-201ENST00000578367 WWC1Q8IX03 1113 aa18.16■□□□□ 0.5
LINC01543-201ENST00000578367 RRP7AQ9Y3A4 280 aaKnown RBP18.16■□□□□ 0.5
LINC01543-201ENST00000578367 BRWD3Q6RI45 1802 aa18.16■□□□□ 0.5
LINC01543-201ENST00000578367 TAF7Q15545 349 aaPredicted RBP18.15■□□□□ 0.5
LINC01543-201ENST00000578367 FAM182BQ5T319 152 aa18.15■□□□□ 0.5
LINC01543-201ENST00000578367 MCM10Q7L590 875 aa18.15■□□□□ 0.5
LINC01543-201ENST00000578367 SMARCC1Q92922 1105 aaPredicted RBP18.15■□□□□ 0.5
LINC01543-201ENST00000578367 NFATC2IPQ8NCF5 419 aa18.14■□□□□ 0.49
LINC01543-201ENST00000578367 PIGBQ92521 554 aa18.14■□□□□ 0.49
LINC01543-201ENST00000578367 PLSCR1O15162 318 aa18.13■□□□□ 0.49
LINC01543-201ENST00000578367 SYTL4Q96C24 671 aaPredicted RBP18.13■□□□□ 0.49
LINC01543-201ENST00000578367 ACSBG1Q96GR2 724 aa18.13■□□□□ 0.49
LINC01543-201ENST00000578367 TRIM37O94972 964 aa18.12■□□□□ 0.49
LINC01543-201ENST00000578367 SF3B2Q13435 895 aaKnown RBP18.12■□□□□ 0.49
LINC01543-201ENST00000578367 IFT57Q9NWB7 429 aa18.12■□□□□ 0.49
LINC01543-201ENST00000578367 KCNQ2O43526 872 aa18.11■□□□□ 0.49
LINC01543-201ENST00000578367 GNAI1P63096 354 aa18.11■□□□□ 0.49
LINC01543-201ENST00000578367 DCTN1Q14203 1278 aa18.11■□□□□ 0.49
LINC01543-201ENST00000578367 CFAP44Q96MT7 982 aa18.11■□□□□ 0.49
LINC01543-201ENST00000578367 ZNF521Q96K83 1311 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms