RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 FAM83GA6ND36 823 aa14.35□□□□□ -0.11
GGA3-205ENST00000578348 MRPL50Q8N5N7 158 aaKnown RBP14.35□□□□□ -0.11
GGA3-205ENST00000578348 ABTB2Q8N961 1025 aa14.35□□□□□ -0.11
GGA3-205ENST00000578348 ARHGAP45Q92619 1136 aa14.35□□□□□ -0.11
GGA3-205ENST00000578348 TWISTNBQ3B726 338 aaPredicted RBP14.34□□□□□ -0.11
GGA3-205ENST00000578348 DCTN1Q14203 1278 aa14.34□□□□□ -0.11
GGA3-205ENST00000578348 SMC5Q8IY18 1101 aa14.34□□□□□ -0.11
GGA3-205ENST00000578348 TSPYL6Q8N831 410 aa14.34□□□□□ -0.11
GGA3-205ENST00000578348 ZBTB40Q9NUA8 1239 aa14.34□□□□□ -0.11
GGA3-205ENST00000578348 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.34□□□□□ -0.11
GGA3-205ENST00000578348 HOXC9P31274 260 aa14.33□□□□□ -0.12
GGA3-205ENST00000578348 HAP1P54257 671 aaPredicted RBP14.32□□□□□ -0.12
GGA3-205ENST00000578348 EYA1Q99502 592 aa14.32□□□□□ -0.12
GGA3-205ENST00000578348 LTN1O94822 1766 aa14.32□□□□□ -0.12
GGA3-205ENST00000578348 NFAT5O94916 1531 aa14.32□□□□□ -0.12
GGA3-205ENST00000578348 CRB1P82279 1406 aa14.32□□□□□ -0.12
GGA3-205ENST00000578348 CHL1O00533 1208 aa14.31□□□□□ -0.12
GGA3-205ENST00000578348 NUTM2GQ5VZR2 741 aa14.31□□□□□ -0.12
GGA3-205ENST00000578348 C8orf58Q8NAV2 365 aa14.31□□□□□ -0.12
GGA3-205ENST00000578348 GAS2L2Q8NHY3 880 aa14.31□□□□□ -0.12
GGA3-205ENST00000578348 KIAA0232Q92628 1395 aa14.31□□□□□ -0.12
GGA3-205ENST00000578348 PHRF1Q9P1Y6 1649 aaKnown RBP14.31□□□□□ -0.12
GGA3-205ENST00000578348 ARXQ96QS3 562 aa14.31□□□□□ -0.12
GGA3-205ENST00000578348 CHMP4BQ9H444 224 aaKnown RBP14.31□□□□□ -0.12
GGA3-205ENST00000578348 LRRC37A3O60309 1634 aa14.3□□□□□ -0.12
GGA3-205ENST00000578348 ESCO1Q5FWF5 840 aa14.3□□□□□ -0.12
GGA3-205ENST00000578348 RBM33Q96EV2 1170 aaKnown RBP14.3□□□□□ -0.12
GGA3-205ENST00000578348 LNPKQ9C0E8 428 aa14.3□□□□□ -0.12
GGA3-205ENST00000578348 KIF1AQ12756 1690 aa14.3□□□□□ -0.12
GGA3-205ENST00000578348 MTHFSDQ2M296 383 aaKnown RBP14.3□□□□□ -0.12
GGA3-205ENST00000578348 MCM10Q7L590 875 aa14.3□□□□□ -0.12
GGA3-205ENST00000578348 C14orf37Q86TY3 774 aa14.3□□□□□ -0.12
GGA3-205ENST00000578348 ABCC4O15439 1325 aa14.29□□□□□ -0.12
GGA3-205ENST00000578348 MCM4P33991 863 aa14.29□□□□□ -0.12
GGA3-205ENST00000578348 NUCB1Q02818 461 aa14.29□□□□□ -0.12
GGA3-205ENST00000578348 PSME1Q06323 249 aa14.29□□□□□ -0.12
GGA3-205ENST00000578348 API5Q9BZZ5 524 aaKnown RBP14.29□□□□□ -0.12
GGA3-205ENST00000578348 ELL2O00472 640 aaPredicted RBP14.29□□□□□ -0.12
GGA3-205ENST00000578348 HTATSF1O43719 755 aaKnown RBP14.29□□□□□ -0.12
GGA3-205ENST00000578348 L1TD1Q5T7N2 865 aaKnown RBP14.29□□□□□ -0.12
GGA3-205ENST00000578348 HSCBQ8IWL3 235 aa14.29□□□□□ -0.12
GGA3-205ENST00000578348 RTF1Q92541 710 aaKnown RBP14.29□□□□□ -0.12
GGA3-205ENST00000578348 CHMP5Q9NZZ3 219 aa14.29□□□□□ -0.12
GGA3-205ENST00000578348 CHD1LQ86WJ1 897 aa14.27□□□□□ -0.12
GGA3-205ENST00000578348 FAM43AQ8N2R8 423 aa14.27□□□□□ -0.12
GGA3-205ENST00000578348 KCNH5Q8NCM2 988 aa14.27□□□□□ -0.12
GGA3-205ENST00000578348 GZF1Q9H116 711 aaPredicted RBP14.27□□□□□ -0.12
GGA3-205ENST00000578348 IP6K1Q92551 441 aa14.27□□□□□ -0.13
GGA3-205ENST00000578348 SLIT3O75094 1523 aa14.27□□□□□ -0.13
GGA3-205ENST00000578348 TRPM3Q9HCF6 1732 aaPredicted RBP14.27□□□□□ -0.13
GGA3-205ENST00000578348 PROSER2Q86WR7 435 aaPredicted RBP14.26□□□□□ -0.13
GGA3-205ENST00000578348 C1orf115Q9H7X2 142 aa14.26□□□□□ -0.13
GGA3-205ENST00000578348 FOXO3O43524 673 aa14.25□□□□□ -0.13
GGA3-205ENST00000578348 ZBTB7BO15156 539 aaPredicted RBP14.24□□□□□ -0.13
GGA3-205ENST00000578348 RBM25P49756 843 aaKnown RBP14.24□□□□□ -0.13
GGA3-205ENST00000578348 ANKRD45Q5TZF3 282 aa14.24□□□□□ -0.13
GGA3-205ENST00000578348 MAP3K5Q99683 1374 aa14.24□□□□□ -0.13
GGA3-205ENST00000578348 C1orf167Q5SNV9 1468 aa14.24□□□□□ -0.13
GGA3-205ENST00000578348 GOLGA6L3A6NEY3 463 aa14.24□□□□□ -0.13
GGA3-205ENST00000578348 ORAI2Q96SN7 254 aa14.24□□□□□ -0.13
GGA3-205ENST00000578348 GNAT3A8MTJ3 354 aa14.23□□□□□ -0.13
GGA3-205ENST00000578348 TRAK2O60296 914 aa14.23□□□□□ -0.13
GGA3-205ENST00000578348 LTV1Q96GA3 475 aaPredicted RBP14.23□□□□□ -0.13
GGA3-205ENST00000578348 TSPYL4Q9UJ04 414 aa14.23□□□□□ -0.13
GGA3-205ENST00000578348 MST1RQ04912 1400 aa14.23□□□□□ -0.13
GGA3-205ENST00000578348 BMP2KLQ5H9B9 411 aa14.22□□□□□ -0.13
GGA3-205ENST00000578348 C19orf44Q9H6X5 657 aa14.22□□□□□ -0.13
GGA3-205ENST00000578348 MSH6P52701 1360 aa14.22□□□□□ -0.13
GGA3-205ENST00000578348 DCCP43146 1447 aa14.22□□□□□ -0.13
GGA3-205ENST00000578348 NCOA3Q9Y6Q9 1424 aa14.22□□□□□ -0.13
GGA3-205ENST00000578348 KRT24Q2M2I5 525 aa14.22□□□□□ -0.13
GGA3-205ENST00000578348 PTPRCP08575 1304 aa14.22□□□□□ -0.13
GGA3-205ENST00000578348 XRCC6P12956 609 aaKnown RBP eCLIP14.21□□□□□ -0.131e-6■■■■□ 19.8
GGA3-205ENST00000578348 GCC1Q96CN9 775 aa14.21□□□□□ -0.13
GGA3-205ENST00000578348 RGS12O14924 1447 aa14.21□□□□□ -0.13
GGA3-205ENST00000578348 BABAM1Q9NWV8 329 aa14.21□□□□□ -0.14
GGA3-205ENST00000578348 FSD2A1L4K1 749 aa14.2□□□□□ -0.14
GGA3-205ENST00000578348 INTS3Q68E01 1043 aaKnown RBP14.2□□□□□ -0.14
GGA3-205ENST00000578348 SOS1Q07889 1333 aaPredicted RBP14.2□□□□□ -0.14
GGA3-205ENST00000578348 STRCP1A6NGW2 1772 aa14.2□□□□□ -0.14
GGA3-205ENST00000578348 ALS2Q96Q42 1657 aa14.2□□□□□ -0.14
GGA3-205ENST00000578348 HSP90AB1P08238 724 aaKnown RBP14.2□□□□□ -0.14
GGA3-205ENST00000578348 SNX21Q969T3 373 aa14.2□□□□□ -0.14
GGA3-205ENST00000578348 NCAPD2Q15021 1401 aa14.19□□□□□ -0.14
GGA3-205ENST00000578348 DDX11L8A8MPP1 907 aa14.19□□□□□ -0.14
GGA3-205ENST00000578348 KRT28Q7Z3Y7 464 aa14.19□□□□□ -0.14
GGA3-205ENST00000578348 PANK2Q9BZ23 570 aa14.19□□□□□ -0.14
GGA3-205ENST00000578348 FAM208AQ9UK61 1670 aaKnown RBP14.19□□□□□ -0.14
GGA3-205ENST00000578348 CAMTA1Q9Y6Y1 1673 aa14.19□□□□□ -0.14
GGA3-205ENST00000578348 GCP02774 474 aa14.18□□□□□ -0.14
GGA3-205ENST00000578348 DDIT3P35638 169 aa14.18□□□□□ -0.14
GGA3-205ENST00000578348 ARHGEF25Q86VW2 580 aa14.18□□□□□ -0.14
GGA3-205ENST00000578348 SIRT2Q8IXJ6 389 aa14.18□□□□□ -0.14
GGA3-205ENST00000578348 RGPD2P0DJD1 1756 aa14.18□□□□□ -0.14
GGA3-205ENST00000578348 EIF5BO60841 1220 aaKnown RBP14.18□□□□□ -0.14
GGA3-205ENST00000578348 USHBP1Q8N6Y0 703 aa14.18□□□□□ -0.14
GGA3-205ENST00000578348 RRAGDQ9NQL2 400 aaPredicted RBP14.18□□□□□ -0.14
GGA3-205ENST00000578348 MIS18AQ9NYP9 233 aa14.18□□□□□ -0.14
GGA3-205ENST00000578348 MED1Q15648 1581 aaPredicted RBP14.18□□□□□ -0.14
GGA3-205ENST00000578348 LMO7Q8WWI1 1683 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms