RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 RGPD3A6NKT7 1758 aaPredicted RBP15.78■□□□□ 0.12
GGA3-204ENST00000578208 RGPD4Q7Z3J3 1758 aa15.78■□□□□ 0.12
GGA3-204ENST00000578208 PCDH11XQ9BZA7 1347 aa15.78■□□□□ 0.12
GGA3-204ENST00000578208 PCDH11YQ9BZA8 1340 aa15.78■□□□□ 0.12
GGA3-204ENST00000578208 PER1O15534 1290 aaPredicted RBP15.78■□□□□ 0.12
GGA3-204ENST00000578208 RREB1Q92766 1687 aa15.78■□□□□ 0.12
GGA3-204ENST00000578208 CNGB1Q14028 1251 aaPredicted RBP15.77■□□□□ 0.12
GGA3-204ENST00000578208 EYA1Q99502 592 aa15.77■□□□□ 0.12
GGA3-204ENST00000578208 NCAPD2Q15021 1401 aa15.77■□□□□ 0.11
GGA3-204ENST00000578208 PLSCR1O15162 318 aa15.76■□□□□ 0.11
GGA3-204ENST00000578208 NBPF14Q5TI25 921 aa15.76■□□□□ 0.11
GGA3-204ENST00000578208 SHANK3Q9BYB0 1731 aa15.76■□□□□ 0.11
GGA3-204ENST00000578208 KCNQ2O43526 872 aa15.75■□□□□ 0.11
GGA3-204ENST00000578208 SYTL4Q96C24 671 aaPredicted RBP15.75■□□□□ 0.11
GGA3-204ENST00000578208 SPG7Q9UQ90 795 aa15.75■□□□□ 0.11
GGA3-204ENST00000578208 NUP188Q5SRE5 1749 aa15.74■□□□□ 0.11
GGA3-204ENST00000578208 PTF1AQ7RTS3 328 aa15.74■□□□□ 0.11
GGA3-204ENST00000578208 DOT1LQ8TEK3 1739 aa15.74■□□□□ 0.11
GGA3-204ENST00000578208 PLEKHG2Q9H7P9 1386 aa15.74■□□□□ 0.11
GGA3-204ENST00000578208 IGSF1Q8N6C5 1336 aa15.73■□□□□ 0.11
GGA3-204ENST00000578208 PSDA5PKW4 1024 aaPredicted RBP15.73■□□□□ 0.11
GGA3-204ENST00000578208 ZEB1P37275 1124 aaPredicted RBP15.73■□□□□ 0.11
GGA3-204ENST00000578208 PKD1L3Q7Z443 1732 aa15.73■□□□□ 0.11
GGA3-204ENST00000578208 MTHFSP49914 203 aa15.72■□□□□ 0.11
GGA3-204ENST00000578208 R3HDM1Q15032 1099 aaKnown RBP15.72■□□□□ 0.11
GGA3-204ENST00000578208 BTAF1O14981 1849 aa15.71■□□□□ 0.11
GGA3-204ENST00000578208 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.71■□□□□ 0.11
GGA3-204ENST00000578208 PRIM1P49642 420 aaKnown RBP15.7■□□□□ 0.1
GGA3-204ENST00000578208 TXNRD1Q16881 649 aa15.7■□□□□ 0.1
GGA3-204ENST00000578208 CYP27B1O15528 508 aa15.68■□□□□ 0.1
GGA3-204ENST00000578208 DIAPH1O60610 1272 aaKnown RBP15.68■□□□□ 0.1
GGA3-204ENST00000578208 IL13P35225 146 aa15.68■□□□□ 0.1
GGA3-204ENST00000578208 PLEKHO1Q53GL0 409 aaPredicted RBP15.68■□□□□ 0.1
GGA3-204ENST00000578208 IFNL2Q8IZJ0 200 aa15.68■□□□□ 0.1
GGA3-204ENST00000578208 KAT6BQ8WYB5 2073 aa15.67■□□□□ 0.1
GGA3-204ENST00000578208 AMOTQ4VCS5 1084 aa15.67■□□□□ 0.1
GGA3-204ENST00000578208 SULT6B1Q6IMI4 303 aa15.67■□□□□ 0.1
GGA3-204ENST00000578208 CFAP53Q96M91 514 aa15.67■□□□□ 0.1
GGA3-204ENST00000578208 STK32BQ9NY57 414 aa15.67■□□□□ 0.1
GGA3-204ENST00000578208 HSP90AB1P08238 724 aaKnown RBP15.65■□□□□ 0.1
GGA3-204ENST00000578208 PHKG2P15735 406 aa15.65■□□□□ 0.1
GGA3-204ENST00000578208 AEBP1Q8IUX7 1158 aa15.65■□□□□ 0.1
GGA3-204ENST00000578208 PROM2Q8N271 834 aa15.65■□□□□ 0.1
GGA3-204ENST00000578208 KDRP35968 1356 aa15.64■□□□□ 0.09
GGA3-204ENST00000578208 NKX1-1Q15270 411 aaPredicted RBP15.64■□□□□ 0.09
GGA3-204ENST00000578208 C1orf141Q5JVX7 400 aa15.64■□□□□ 0.09
GGA3-204ENST00000578208 SLC27A3Q5K4L6 730 aa15.64■□□□□ 0.09
GGA3-204ENST00000578208 ZNF530Q6P9A1 599 aaPredicted RBP15.64■□□□□ 0.09
GGA3-204ENST00000578208 TOGARAM1Q9Y4F4 1720 aa15.63■□□□□ 0.09
GGA3-204ENST00000578208 MPRIPQ6WCQ1 1025 aa15.63■□□□□ 0.09
GGA3-204ENST00000578208 ANO8Q9HCE9 1232 aaPredicted RBP15.63■□□□□ 0.09
GGA3-204ENST00000578208 LRP5O75197 1615 aa15.62■□□□□ 0.09
GGA3-204ENST00000578208 U2SURPO15042 1029 aaKnown RBP15.62■□□□□ 0.09
GGA3-204ENST00000578208 HMOX1P09601 288 aa15.62■□□□□ 0.09
GGA3-204ENST00000578208 HMGB2P26583 209 aaKnown RBP15.62■□□□□ 0.09
GGA3-204ENST00000578208 TMOD3Q9NYL9 352 aa15.62■□□□□ 0.09
GGA3-204ENST00000578208 COL3A1P02461 1466 aaPredicted RBP15.62■□□□□ 0.09
GGA3-204ENST00000578208 PPP2R1AP30153 589 aa15.61■□□□□ 0.09
GGA3-204ENST00000578208 SLC15A2Q16348 729 aa15.61■□□□□ 0.09
GGA3-204ENST00000578208 SMARCC1Q92922 1105 aaPredicted RBP15.61■□□□□ 0.09
GGA3-204ENST00000578208 CCNL1Q9UK58 526 aaPredicted RBP15.61■□□□□ 0.09
GGA3-204ENST00000578208 NUDCQ9Y266 331 aa15.61■□□□□ 0.09
GGA3-204ENST00000578208 PALLDQ8WX93 1383 aa15.61■□□□□ 0.09
GGA3-204ENST00000578208 LY75O60449 1722 aa15.6■□□□□ 0.09
GGA3-204ENST00000578208 DCAF5Q96JK2 942 aa15.6■□□□□ 0.09
GGA3-204ENST00000578208 PAPPAQ13219 1627 aa15.6■□□□□ 0.09
GGA3-204ENST00000578208 DDX10Q13206 875 aaKnown RBP15.59■□□□□ 0.09
GGA3-204ENST00000578208 LRRC4BQ9NT99 713 aa15.59■□□□□ 0.09
GGA3-204ENST00000578208 ITGB4P16144 1822 aa15.59■□□□□ 0.09
GGA3-204ENST00000578208 PIGBQ92521 554 aa15.58■□□□□ 0.08
GGA3-204ENST00000578208 ERVV-2B6SEH9 535 aa15.57■□□□□ 0.08
GGA3-204ENST00000578208 CABP4P57796 275 aa15.57■□□□□ 0.08
GGA3-204ENST00000578208 AKAP4Q5JQC9 854 aa15.56■□□□□ 0.08
GGA3-204ENST00000578208 SPON1Q9HCB6 807 aa15.56■□□□□ 0.08
GGA3-204ENST00000578208 CASZ1Q86V15 1759 aa15.55■□□□□ 0.08
GGA3-204ENST00000578208 KDM6AO15550 1401 aaPredicted RBP15.55■□□□□ 0.08
GGA3-204ENST00000578208 KCNQ4P56696 695 aa15.55■□□□□ 0.08
GGA3-204ENST00000578208 RALBP1Q15311 655 aa15.55■□□□□ 0.08
GGA3-204ENST00000578208 ZNF827Q17R98 1081 aa15.55■□□□□ 0.08
GGA3-204ENST00000578208 TFCP2L1Q9NZI6 479 aa15.54■□□□□ 0.08
GGA3-204ENST00000578208 PPP1R1BQ9UD71 204 aaPredicted RBP15.54■□□□□ 0.08
GGA3-204ENST00000578208 C5P01031 1676 aa15.54■□□□□ 0.08
GGA3-204ENST00000578208 U2AF1L5P0DN76 240 aaPredicted RBP15.53■□□□□ 0.08
GGA3-204ENST00000578208 U2AF1Q01081 240 aaKnown RBP eCLIP15.53■□□□□ 0.08
GGA3-204ENST00000578208 GAS2L2Q8NHY3 880 aa15.53■□□□□ 0.08
GGA3-204ENST00000578208 AKT1S1Q96B36 256 aa15.53■□□□□ 0.08
GGA3-204ENST00000578208 ZBTB7AO95365 584 aa15.52■□□□□ 0.08
GGA3-204ENST00000578208 MTHFSDQ2M296 383 aaKnown RBP15.52■□□□□ 0.08
GGA3-204ENST00000578208 ASAP1Q9ULH1 1129 aa15.52■□□□□ 0.08
GGA3-204ENST00000578208 QSER1Q2KHR3 1735 aa15.51■□□□□ 0.07
GGA3-204ENST00000578208 LOC102724428A0A0B4J2F2 783 aa15.51■□□□□ 0.07
GGA3-204ENST00000578208 PRKAR2BP31323 418 aa15.51■□□□□ 0.07
GGA3-204ENST00000578208 SIK1P57059 783 aa15.51■□□□□ 0.07
GGA3-204ENST00000578208 MTFR1LQ9H019 292 aa15.51■□□□□ 0.07
GGA3-204ENST00000578208 ATG3Q9NT62 314 aa15.51■□□□□ 0.07
GGA3-204ENST00000578208 SCN11AQ9UI33 1791 aa15.5■□□□□ 0.07
GGA3-204ENST00000578208 RNMTO43148 476 aaKnown RBP15.5■□□□□ 0.07
GGA3-204ENST00000578208 NEFMP07197 916 aa15.5■□□□□ 0.07
GGA3-204ENST00000578208 AK7Q96M32 723 aa15.5■□□□□ 0.07
GGA3-204ENST00000578208 RSPH6AQ9H0K4 717 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms