RNA–Protein interactions for RNA: ENST00000578061.5

LIMD2-202, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LIMD2, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-202ENST00000578061 NSD2O96028 1365 aa28.34■■■□□ 2.13
LIMD2-202ENST00000578061 NUP188Q5SRE5 1749 aa28.33■■■□□ 2.13
LIMD2-202ENST00000578061 TATP17735 454 aaPredicted RBP28.32■■■□□ 2.12
LIMD2-202ENST00000578061 NHSQ6T4R5 1651 aa28.3■■■□□ 2.12
LIMD2-202ENST00000578061 NBPF14Q5TI25 921 aa28.3■■■□□ 2.12
LIMD2-202ENST00000578061 PROM2Q8N271 834 aa28.3■■■□□ 2.12
LIMD2-202ENST00000578061 AMER1Q5JTC6 1135 aaPredicted RBP28.29■■■□□ 2.12
LIMD2-202ENST00000578061 EYA1Q99502 592 aa28.29■■■□□ 2.12
LIMD2-202ENST00000578061 SHANK3Q9BYB0 1731 aa28.27■■■□□ 2.12
LIMD2-202ENST00000578061 EIF4A2Q14240 407 aaKnown RBP28.27■■■□□ 2.12
LIMD2-202ENST00000578061 TXNRD1Q16881 649 aa28.26■■■□□ 2.11
LIMD2-202ENST00000578061 SYTL4Q96C24 671 aaPredicted RBP28.26■■■□□ 2.11
LIMD2-202ENST00000578061 RGPD3A6NKT7 1758 aaPredicted RBP28.26■■■□□ 2.11
LIMD2-202ENST00000578061 RGPD4Q7Z3J3 1758 aa28.26■■■□□ 2.11
LIMD2-202ENST00000578061 KAT6BQ8WYB5 2073 aa28.24■■■□□ 2.11
LIMD2-202ENST00000578061 PRIM1P49642 420 aaKnown RBP28.24■■■□□ 2.11
LIMD2-202ENST00000578061 CNGB1Q14028 1251 aaPredicted RBP28.24■■■□□ 2.11
LIMD2-202ENST00000578061 PER1O15534 1290 aaPredicted RBP28.23■■■□□ 2.11
LIMD2-202ENST00000578061 CC2D1BQ5T0F9 858 aaKnown RBP28.23■■■□□ 2.11
LIMD2-202ENST00000578061 ANO8Q9HCE9 1232 aaPredicted RBP28.23■■■□□ 2.11
LIMD2-202ENST00000578061 NCAPD2Q15021 1401 aa28.21■■■□□ 2.11
LIMD2-202ENST00000578061 BTAF1O14981 1849 aa28.21■■■□□ 2.11
LIMD2-202ENST00000578061 PCDH11XQ9BZA7 1347 aa28.2■■■□□ 2.11
LIMD2-202ENST00000578061 PCDH11YQ9BZA8 1340 aa28.2■■■□□ 2.11
LIMD2-202ENST00000578061 DOT1LQ8TEK3 1739 aa28.19■■■□□ 2.1
LIMD2-202ENST00000578061 CYP27B1O15528 508 aa28.19■■■□□ 2.1
LIMD2-202ENST00000578061 SPG7Q9UQ90 795 aa28.15■■■□□ 2.1
LIMD2-202ENST00000578061 IGSF1Q8N6C5 1336 aa28.15■■■□□ 2.1
LIMD2-202ENST00000578061 STK32BQ9NY57 414 aa28.13■■■□□ 2.09
LIMD2-202ENST00000578061 LRP5O75197 1615 aa28.13■■■□□ 2.09
LIMD2-202ENST00000578061 PKD1L3Q7Z443 1732 aa28.12■■■□□ 2.09
LIMD2-202ENST00000578061 LRRC4BQ9NT99 713 aa28.12■■■□□ 2.09
LIMD2-202ENST00000578061 MTHFSP49914 203 aa28.11■■■□□ 2.09
LIMD2-202ENST00000578061 KCNQ4P56696 695 aa28.11■■■□□ 2.09
LIMD2-202ENST00000578061 PDGFDQ9GZP0 370 aaPredicted RBP28.11■■■□□ 2.09
LIMD2-202ENST00000578061 AEBP1Q8IUX7 1158 aa28.1■■■□□ 2.09
LIMD2-202ENST00000578061 SLC15A2Q16348 729 aa28.09■■■□□ 2.09
LIMD2-202ENST00000578061 IL13P35225 146 aa28.08■■■□□ 2.09
LIMD2-202ENST00000578061 MPRIPQ6WCQ1 1025 aa28.08■■■□□ 2.09
LIMD2-202ENST00000578061 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.08■■■□□ 2.09
LIMD2-202ENST00000578061 PHKG2P15735 406 aa28.05■■■□□ 2.08
LIMD2-202ENST00000578061 NKX1-1Q15270 411 aaPredicted RBP28.05■■■□□ 2.08
LIMD2-202ENST00000578061 ZNF827Q17R98 1081 aa28.05■■■□□ 2.08
LIMD2-202ENST00000578061 SULT6B1Q6IMI4 303 aa28.05■■■□□ 2.08
LIMD2-202ENST00000578061 NPC1L1Q9UHC9 1359 aa28.05■■■□□ 2.08
LIMD2-202ENST00000578061 TOGARAM1Q9Y4F4 1720 aa28.04■■■□□ 2.08
LIMD2-202ENST00000578061 SLC27A3Q5K4L6 730 aa28.04■■■□□ 2.08
LIMD2-202ENST00000578061 IFNL2Q8IZJ0 200 aa28.04■■■□□ 2.08
LIMD2-202ENST00000578061 PAPPAQ13219 1627 aa28.03■■■□□ 2.08
LIMD2-202ENST00000578061 CCNL1Q9UK58 526 aaPredicted RBP28.02■■■□□ 2.08
LIMD2-202ENST00000578061 ZBTB7AO95365 584 aa28.01■■■□□ 2.07
LIMD2-202ENST00000578061 PLEKHO1Q53GL0 409 aaPredicted RBP28.01■■■□□ 2.07
LIMD2-202ENST00000578061 SPON1Q9HCB6 807 aa28.01■■■□□ 2.07
LIMD2-202ENST00000578061 PIGBQ92521 554 aa28■■■□□ 2.07
LIMD2-202ENST00000578061 CASZ1Q86V15 1759 aa28■■■□□ 2.07
LIMD2-202ENST00000578061 ZNF530Q6P9A1 599 aaPredicted RBP27.99■■■□□ 2.07
LIMD2-202ENST00000578061 LY75O60449 1722 aa27.98■■■□□ 2.07
LIMD2-202ENST00000578061 AKT1S1Q96B36 256 aa27.98■■■□□ 2.07
LIMD2-202ENST00000578061 PALLDQ8WX93 1383 aa27.98■■■□□ 2.07
LIMD2-202ENST00000578061 DIAPH1O60610 1272 aaKnown RBP27.97■■■□□ 2.07
LIMD2-202ENST00000578061 HMOX1P09601 288 aa27.97■■■□□ 2.07
LIMD2-202ENST00000578061 ATF5Q9Y2D1 282 aaPredicted RBP27.97■■■□□ 2.07
LIMD2-202ENST00000578061 ITGB4P16144 1822 aa27.97■■■□□ 2.07
LIMD2-202ENST00000578061 AMOTQ4VCS5 1084 aa27.96■■■□□ 2.07
LIMD2-202ENST00000578061 TMOD3Q9NYL9 352 aa27.96■■■□□ 2.07
LIMD2-202ENST00000578061 KDRP35968 1356 aa27.96■■■□□ 2.07
LIMD2-202ENST00000578061 PLEKHG2Q9H7P9 1386 aa27.96■■■□□ 2.07
LIMD2-202ENST00000578061 PPP1R1BQ9UD71 204 aaPredicted RBP27.94■■■□□ 2.06
LIMD2-202ENST00000578061 TFCP2L1Q9NZI6 479 aa27.93■■■□□ 2.06
LIMD2-202ENST00000578061 SMARCC1Q92922 1105 aaPredicted RBP27.92■■■□□ 2.06
LIMD2-202ENST00000578061 COL3A1P02461 1466 aaPredicted RBP27.91■■■□□ 2.06
LIMD2-202ENST00000578061 C1orf141Q5JVX7 400 aa27.91■■■□□ 2.06
LIMD2-202ENST00000578061 ASAP1Q9ULH1 1129 aa27.91■■■□□ 2.06
LIMD2-202ENST00000578061 U2SURPO15042 1029 aaKnown RBP27.9■■■□□ 2.06
LIMD2-202ENST00000578061 HSP90AB1P08238 724 aaKnown RBP27.9■■■□□ 2.06
LIMD2-202ENST00000578061 DCAF5Q96JK2 942 aa27.9■■■□□ 2.06
LIMD2-202ENST00000578061 KDM6AO15550 1401 aaPredicted RBP27.89■■■□□ 2.06
LIMD2-202ENST00000578061 PNPLA7Q6ZV29 1317 aa27.89■■■□□ 2.05
LIMD2-202ENST00000578061 MTFR1LQ9H019 292 aa27.88■■■□□ 2.05
LIMD2-202ENST00000578061 PPP2R1AP30153 589 aa27.87■■■□□ 2.05
LIMD2-202ENST00000578061 PTGER2P43116 358 aa27.87■■■□□ 2.05
LIMD2-202ENST00000578061 ATG3Q9NT62 314 aa27.87■■■□□ 2.05
LIMD2-202ENST00000578061 ERVV-2B6SEH9 535 aa27.86■■■□□ 2.05
LIMD2-202ENST00000578061 CABP4P57796 275 aa27.85■■■□□ 2.05
LIMD2-202ENST00000578061 LOC102724428A0A0B4J2F2 783 aa27.84■■■□□ 2.05
LIMD2-202ENST00000578061 SIK1P57059 783 aa27.84■■■□□ 2.05
LIMD2-202ENST00000578061 CFAP53Q96M91 514 aa27.84■■■□□ 2.05
LIMD2-202ENST00000578061 TUBGCP6Q96RT7 1819 aa27.83■■■□□ 2.05
LIMD2-202ENST00000578061 MSH5O43196 834 aa27.83■■■□□ 2.05
LIMD2-202ENST00000578061 C5P01031 1676 aa27.83■■■□□ 2.05
LIMD2-202ENST00000578061 MTHFSDQ2M296 383 aaKnown RBP27.82■■■□□ 2.04
LIMD2-202ENST00000578061 AKAP4Q5JQC9 854 aa27.81■■■□□ 2.04
LIMD2-202ENST00000578061 ATP6V1AP38606 617 aa27.8■■■□□ 2.04
LIMD2-202ENST00000578061 COL23A1Q86Y22 540 aaPredicted RBP27.8■■■□□ 2.04
LIMD2-202ENST00000578061 NFATC2IPQ8NCF5 419 aa27.8■■■□□ 2.04
LIMD2-202ENST00000578061 SGIP1Q9BQI5 828 aa27.8■■■□□ 2.04
LIMD2-202ENST00000578061 QSER1Q2KHR3 1735 aa27.79■■■□□ 2.04
LIMD2-202ENST00000578061 ITPK1Q13572 414 aa27.79■■■□□ 2.04
LIMD2-202ENST00000578061 LINC00116Q8NCU8 138 aa27.79■■■□□ 2.04
LIMD2-202ENST00000578061 RBM42Q9BTD8 480 aaKnown RBP27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms