RNA–Protein interactions for RNA: ENST00000578006.5

RHBDL3-205, Transcript of rhomboid like 3, humanhuman

TSL 1 (best)

Gene RHBDL3, Length 1,341 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-205ENST00000578006 PLSCR1O15162 318 aa27.8■■■□□ 2.04
RHBDL3-205ENST00000578006 PER1O15534 1290 aaPredicted RBP27.79■■■□□ 2.04
RHBDL3-205ENST00000578006 TATP17735 454 aaPredicted RBP27.79■■■□□ 2.04
RHBDL3-205ENST00000578006 ZCRB1Q8TBF4 217 aaKnown RBP27.79■■■□□ 2.04
RHBDL3-205ENST00000578006 PKD1L3Q7Z443 1732 aa27.77■■■□□ 2.04
RHBDL3-205ENST00000578006 BTAF1O14981 1849 aa27.77■■■□□ 2.04
RHBDL3-205ENST00000578006 DDX54Q8TDD1 881 aaKnown RBP27.77■■■□□ 2.04
RHBDL3-205ENST00000578006 DOT1LQ8TEK3 1739 aa27.76■■■□□ 2.03
RHBDL3-205ENST00000578006 PTF1AQ7RTS3 328 aa27.75■■■□□ 2.03
RHBDL3-205ENST00000578006 NPC1L1Q9UHC9 1359 aa27.75■■■□□ 2.03
RHBDL3-205ENST00000578006 EIF4A2Q14240 407 aaKnown RBP27.73■■■□□ 2.03
RHBDL3-205ENST00000578006 ACSBG1Q96GR2 724 aa27.73■■■□□ 2.03
RHBDL3-205ENST00000578006 EYA1Q99502 592 aa27.73■■■□□ 2.03
RHBDL3-205ENST00000578006 PCDH11XQ9BZA7 1347 aa27.72■■■□□ 2.03
RHBDL3-205ENST00000578006 PCDH11YQ9BZA8 1340 aa27.72■■■□□ 2.03
RHBDL3-205ENST00000578006 PLEKHG2Q9H7P9 1386 aa27.71■■■□□ 2.03
RHBDL3-205ENST00000578006 KCNQ2O43526 872 aa27.71■■■□□ 2.03
RHBDL3-205ENST00000578006 SRCAPQ6ZRS2 3230 aa27.69■■■□□ 2.02
RHBDL3-205ENST00000578006 NBPF14Q5TI25 921 aa27.68■■■□□ 2.02
RHBDL3-205ENST00000578006 IGSF1Q8N6C5 1336 aa27.68■■■□□ 2.02
RHBDL3-205ENST00000578006 CC2D1BQ5T0F9 858 aaKnown RBP27.67■■■□□ 2.02
RHBDL3-205ENST00000578006 PSDA5PKW4 1024 aaPredicted RBP27.67■■■□□ 2.02
RHBDL3-205ENST00000578006 R3HDM1Q15032 1099 aaKnown RBP27.66■■■□□ 2.02
RHBDL3-205ENST00000578006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.65■■■□□ 2.02
RHBDL3-205ENST00000578006 SPG7Q9UQ90 795 aa27.65■■■□□ 2.02
RHBDL3-205ENST00000578006 LRP5O75197 1615 aa27.64■■■□□ 2.02
RHBDL3-205ENST00000578006 TXNRD1Q16881 649 aa27.63■■■□□ 2.01
RHBDL3-205ENST00000578006 PROM2Q8N271 834 aa27.62■■■□□ 2.01
RHBDL3-205ENST00000578006 SYTL4Q96C24 671 aaPredicted RBP27.62■■■□□ 2.01
RHBDL3-205ENST00000578006 CYP27B1O15528 508 aa27.61■■■□□ 2.01
RHBDL3-205ENST00000578006 PRIM1P49642 420 aaKnown RBP27.61■■■□□ 2.01
RHBDL3-205ENST00000578006 MTHFSP49914 203 aa27.61■■■□□ 2.01
RHBDL3-205ENST00000578006 TOGARAM1Q9Y4F4 1720 aa27.6■■■□□ 2.01
RHBDL3-205ENST00000578006 ITGB4P16144 1822 aa27.6■■■□□ 2.01
RHBDL3-205ENST00000578006 LY75O60449 1722 aa27.6■■■□□ 2.01
RHBDL3-205ENST00000578006 PAPPAQ13219 1627 aa27.57■■■□□ 2
RHBDL3-205ENST00000578006 IL13P35225 146 aa27.57■■■□□ 2
RHBDL3-205ENST00000578006 KDRP35968 1356 aa27.56■■■□□ 2
RHBDL3-205ENST00000578006 NKX1-1Q15270 411 aaPredicted RBP27.55■■■□□ 2
RHBDL3-205ENST00000578006 IFNL2Q8IZJ0 200 aa27.54■■■□□ 2
RHBDL3-205ENST00000578006 ANO8Q9HCE9 1232 aaPredicted RBP27.54■■■□□ 2
RHBDL3-205ENST00000578006 CNGB1Q14028 1251 aaPredicted RBP27.53■■■□□ 2
RHBDL3-205ENST00000578006 SLC27A3Q5K4L6 730 aa27.53■■■□□ 2
RHBDL3-205ENST00000578006 PHKG2P15735 406 aa27.52■■■□□ 2
RHBDL3-205ENST00000578006 AMOTQ4VCS5 1084 aa27.51■■□□□ 1.99
RHBDL3-205ENST00000578006 PLEKHO1Q53GL0 409 aaPredicted RBP27.51■■□□□ 1.99
RHBDL3-205ENST00000578006 SULT6B1Q6IMI4 303 aa27.51■■□□□ 1.99
RHBDL3-205ENST00000578006 STK32BQ9NY57 414 aa27.51■■□□□ 1.99
RHBDL3-205ENST00000578006 CASZ1Q86V15 1759 aa27.51■■□□□ 1.99
RHBDL3-205ENST00000578006 COL3A1P02461 1466 aaPredicted RBP27.51■■□□□ 1.99
RHBDL3-205ENST00000578006 DIAPH1O60610 1272 aaKnown RBP27.5■■□□□ 1.99
RHBDL3-205ENST00000578006 AEBP1Q8IUX7 1158 aa27.5■■□□□ 1.99
RHBDL3-205ENST00000578006 SLC15A2Q16348 729 aa27.48■■□□□ 1.99
RHBDL3-205ENST00000578006 HSP90AB1P08238 724 aaKnown RBP27.47■■□□□ 1.99
RHBDL3-205ENST00000578006 QSER1Q2KHR3 1735 aa27.47■■□□□ 1.99
RHBDL3-205ENST00000578006 MPRIPQ6WCQ1 1025 aa27.46■■□□□ 1.99
RHBDL3-205ENST00000578006 LRRC4BQ9NT99 713 aa27.46■■□□□ 1.99
RHBDL3-205ENST00000578006 ZEB1P37275 1124 aaPredicted RBP27.45■■□□□ 1.99
RHBDL3-205ENST00000578006 ZNF530Q6P9A1 599 aaPredicted RBP27.44■■□□□ 1.98
RHBDL3-205ENST00000578006 CFAP53Q96M91 514 aa27.43■■□□□ 1.98
RHBDL3-205ENST00000578006 PALLDQ8WX93 1383 aa27.43■■□□□ 1.98
RHBDL3-205ENST00000578006 HMGB2P26583 209 aaKnown RBP27.42■■□□□ 1.98
RHBDL3-205ENST00000578006 SMARCC1Q92922 1105 aaPredicted RBP27.42■■□□□ 1.98
RHBDL3-205ENST00000578006 TMOD3Q9NYL9 352 aa27.42■■□□□ 1.98
RHBDL3-205ENST00000578006 CCNL1Q9UK58 526 aaPredicted RBP27.42■■□□□ 1.98
RHBDL3-205ENST00000578006 C5P01031 1676 aa27.42■■□□□ 1.98
RHBDL3-205ENST00000578006 TAF1LQ8IZX4 1826 aa27.42■■□□□ 1.98
RHBDL3-205ENST00000578006 C1orf141Q5JVX7 400 aa27.41■■□□□ 1.98
RHBDL3-205ENST00000578006 DCAF5Q96JK2 942 aa27.41■■□□□ 1.98
RHBDL3-205ENST00000578006 PIGBQ92521 554 aa27.41■■□□□ 1.98
RHBDL3-205ENST00000578006 SCN11AQ9UI33 1791 aa27.4■■□□□ 1.98
RHBDL3-205ENST00000578006 HMOX1P09601 288 aa27.4■■□□□ 1.98
RHBDL3-205ENST00000578006 PPP2R1AP30153 589 aa27.4■■□□□ 1.98
RHBDL3-205ENST00000578006 TUBGCP6Q96RT7 1819 aa27.39■■□□□ 1.98
RHBDL3-205ENST00000578006 VIRMAQ69YN4 1812 aaKnown RBP27.39■■□□□ 1.97
RHBDL3-205ENST00000578006 ERVV-2B6SEH9 535 aa27.39■■□□□ 1.97
RHBDL3-205ENST00000578006 KDM6AO15550 1401 aaPredicted RBP27.38■■□□□ 1.97
RHBDL3-205ENST00000578006 ZNF827Q17R98 1081 aa27.38■■□□□ 1.97
RHBDL3-205ENST00000578006 AKT1S1Q96B36 256 aa27.38■■□□□ 1.97
RHBDL3-205ENST00000578006 SPON1Q9HCB6 807 aa27.38■■□□□ 1.97
RHBDL3-205ENST00000578006 U2SURPO15042 1029 aaKnown RBP27.36■■□□□ 1.97
RHBDL3-205ENST00000578006 KCNQ4P56696 695 aa27.35■■□□□ 1.97
RHBDL3-205ENST00000578006 AKAP4Q5JQC9 854 aa27.34■■□□□ 1.97
RHBDL3-205ENST00000578006 PDGFDQ9GZP0 370 aaPredicted RBP27.33■■□□□ 1.97
RHBDL3-205ENST00000578006 NUDCQ9Y266 331 aa27.33■■□□□ 1.97
RHBDL3-205ENST00000578006 ZNF831Q5JPB2 1677 aa27.31■■□□□ 1.96
RHBDL3-205ENST00000578006 C4BP0C0L5 1744 aa27.31■■□□□ 1.96
RHBDL3-205ENST00000578006 ADAMTS7Q9UKP4 1686 aa27.31■■□□□ 1.96
RHBDL3-205ENST00000578006 CABP4P57796 275 aa27.3■■□□□ 1.96
RHBDL3-205ENST00000578006 TFCP2L1Q9NZI6 479 aa27.3■■□□□ 1.96
RHBDL3-205ENST00000578006 ZBTB7AO95365 584 aa27.29■■□□□ 1.96
RHBDL3-205ENST00000578006 DDX10Q13206 875 aaKnown RBP27.29■■□□□ 1.96
RHBDL3-205ENST00000578006 MTFR1LQ9H019 292 aa27.29■■□□□ 1.96
RHBDL3-205ENST00000578006 ASAP1Q9ULH1 1129 aa27.29■■□□□ 1.96
RHBDL3-205ENST00000578006 LOC102724428A0A0B4J2F2 783 aa27.28■■□□□ 1.96
RHBDL3-205ENST00000578006 SIK1P57059 783 aa27.28■■□□□ 1.96
RHBDL3-205ENST00000578006 MTHFSDQ2M296 383 aaKnown RBP27.28■■□□□ 1.96
RHBDL3-205ENST00000578006 ATG3Q9NT62 314 aa27.28■■□□□ 1.96
RHBDL3-205ENST00000578006 PNPLA7Q6ZV29 1317 aa27.28■■□□□ 1.96
RHBDL3-205ENST00000578006 MRC1P22897 1456 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms