RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 MEGF6O75095 1541 aa18.69■□□□□ 0.58
SNORD3B-1-201ENST00000577988 KAT6BQ8WYB5 2073 aa18.69■□□□□ 0.58
SNORD3B-1-201ENST00000577988 SPG7Q9UQ90 795 aa18.68■□□□□ 0.58
SNORD3B-1-201ENST00000577988 NUDCQ9Y266 331 aa18.68■□□□□ 0.58
SNORD3B-1-201ENST00000577988 KDRP35968 1356 aa18.67■□□□□ 0.58
SNORD3B-1-201ENST00000577988 RGPD1P0DJD0 1748 aa18.66■□□□□ 0.58
SNORD3B-1-201ENST00000577988 SBF2Q86WG5 1849 aa18.66■□□□□ 0.58
SNORD3B-1-201ENST00000577988 TRIM37O94972 964 aa18.66■□□□□ 0.58
SNORD3B-1-201ENST00000577988 SULT6B1Q6IMI4 303 aa18.66■□□□□ 0.58
SNORD3B-1-201ENST00000577988 DDX54Q8TDD1 881 aaKnown RBP18.66■□□□□ 0.58
SNORD3B-1-201ENST00000577988 PCDH11XQ9BZA7 1347 aa18.66■□□□□ 0.58
SNORD3B-1-201ENST00000577988 PCDH11YQ9BZA8 1340 aa18.66■□□□□ 0.58
SNORD3B-1-201ENST00000577988 BAG6P46379 1132 aa18.65■□□□□ 0.58
SNORD3B-1-201ENST00000577988 AMOTQ4VCS5 1084 aa18.65■□□□□ 0.58
SNORD3B-1-201ENST00000577988 BCL11BQ9C0K0 894 aaPredicted RBP18.65■□□□□ 0.58
SNORD3B-1-201ENST00000577988 COL3A1P02461 1466 aaPredicted RBP18.65■□□□□ 0.58
SNORD3B-1-201ENST00000577988 PLEKHO1Q53GL0 409 aaPredicted RBP18.64■□□□□ 0.57
SNORD3B-1-201ENST00000577988 PKD1L3Q7Z443 1732 aa18.63■□□□□ 0.57
SNORD3B-1-201ENST00000577988 MYBBP1AQ9BQG0 1328 aaKnown RBP18.63■□□□□ 0.57
SNORD3B-1-201ENST00000577988 PRKRIP1Q9H875 184 aaPredicted RBP18.62■□□□□ 0.57
SNORD3B-1-201ENST00000577988 EP400Q96L91 3159 aa18.61■□□□□ 0.57
SNORD3B-1-201ENST00000577988 SHANK3Q9BYB0 1731 aa18.61■□□□□ 0.57
SNORD3B-1-201ENST00000577988 U2SURPO15042 1029 aaKnown RBP18.61■□□□□ 0.57
SNORD3B-1-201ENST00000577988 NKX1-1Q15270 411 aaPredicted RBP18.61■□□□□ 0.57
SNORD3B-1-201ENST00000577988 AEBP1Q8IUX7 1158 aa18.61■□□□□ 0.57
SNORD3B-1-201ENST00000577988 IFNL2Q8IZJ0 200 aa18.61■□□□□ 0.57
SNORD3B-1-201ENST00000577988 CYP27B1O15528 508 aa18.6■□□□□ 0.57
SNORD3B-1-201ENST00000577988 APBA3O96018 575 aa18.6■□□□□ 0.57
SNORD3B-1-201ENST00000577988 PLSCR1O15162 318 aa18.59■□□□□ 0.57
SNORD3B-1-201ENST00000577988 HSP90AB1P08238 724 aaKnown RBP18.59■□□□□ 0.57
SNORD3B-1-201ENST00000577988 TNS1Q9HBL0 1735 aaKnown RBP18.58■□□□□ 0.57
SNORD3B-1-201ENST00000577988 HMOX1P09601 288 aa18.58■□□□□ 0.56
SNORD3B-1-201ENST00000577988 FCHSD2O94868 740 aa18.57■□□□□ 0.56
SNORD3B-1-201ENST00000577988 PHKG2P15735 406 aa18.57■□□□□ 0.56
SNORD3B-1-201ENST00000577988 DEFB132Q7Z7B7 95 aa18.57■□□□□ 0.56
SNORD3B-1-201ENST00000577988 U2AF1L5P0DN76 240 aaPredicted RBP18.56■□□□□ 0.56
SNORD3B-1-201ENST00000577988 U2AF1Q01081 240 aaKnown RBP eCLIP18.56■□□□□ 0.561e-12■■■■■ 42.5
SNORD3B-1-201ENST00000577988 NHSQ6T4R5 1651 aa18.56■□□□□ 0.56
SNORD3B-1-201ENST00000577988 EN1Q05925 392 aaPredicted RBP18.55■□□□□ 0.56
SNORD3B-1-201ENST00000577988 C1orf141Q5JVX7 400 aa18.55■□□□□ 0.56
SNORD3B-1-201ENST00000577988 ZNF530Q6P9A1 599 aaPredicted RBP18.55■□□□□ 0.56
SNORD3B-1-201ENST00000577988 ACSBG1Q96GR2 724 aa18.55■□□□□ 0.56
SNORD3B-1-201ENST00000577988 CAMKK2Q96RR4 588 aa18.55■□□□□ 0.56
SNORD3B-1-201ENST00000577988 PNNQ9H307 717 aaKnown RBP18.55■□□□□ 0.56
SNORD3B-1-201ENST00000577988 KCNQ2O43526 872 aa18.54■□□□□ 0.56
SNORD3B-1-201ENST00000577988 PRIM1P49642 420 aaKnown RBP18.54■□□□□ 0.56
SNORD3B-1-201ENST00000577988 ANP32CO43423 234 aa18.53■□□□□ 0.56
SNORD3B-1-201ENST00000577988 DCAF5Q96JK2 942 aa18.53■□□□□ 0.56
SNORD3B-1-201ENST00000577988 ERVV-2B6SEH9 535 aa18.52■□□□□ 0.56
SNORD3B-1-201ENST00000577988 AKAP4Q5JQC9 854 aa18.52■□□□□ 0.56
SNORD3B-1-201ENST00000577988 GAS2L2Q8NHY3 880 aa18.52■□□□□ 0.56
SNORD3B-1-201ENST00000577988 RSPH6AQ9H0K4 717 aa18.52■□□□□ 0.56
SNORD3B-1-201ENST00000577988 RGPD3A6NKT7 1758 aaPredicted RBP18.52■□□□□ 0.55
SNORD3B-1-201ENST00000577988 RGPD4Q7Z3J3 1758 aa18.52■□□□□ 0.55
SNORD3B-1-201ENST00000577988 NEFMP07197 916 aa18.51■□□□□ 0.55
SNORD3B-1-201ENST00000577988 PTF1AQ7RTS3 328 aa18.51■□□□□ 0.55
SNORD3B-1-201ENST00000577988 SYTL4Q96C24 671 aaPredicted RBP18.51■□□□□ 0.55
SNORD3B-1-201ENST00000577988 DOT1LQ8TEK3 1739 aa18.5■□□□□ 0.55
SNORD3B-1-201ENST00000577988 HMGB2P26583 209 aaKnown RBP18.5■□□□□ 0.55
SNORD3B-1-201ENST00000577988 PRKAR2BP31323 418 aa18.5■□□□□ 0.55
SNORD3B-1-201ENST00000577988 EZH2Q15910 746 aaKnown RBP18.5■□□□□ 0.55
SNORD3B-1-201ENST00000577988 MTHFSDQ2M296 383 aaKnown RBP18.5■□□□□ 0.55
SNORD3B-1-201ENST00000577988 BTAF1O14981 1849 aa18.5■□□□□ 0.55
SNORD3B-1-201ENST00000577988 ITGB4P16144 1822 aa18.49■□□□□ 0.55
SNORD3B-1-201ENST00000577988 MPRIPQ6WCQ1 1025 aa18.47■□□□□ 0.55
SNORD3B-1-201ENST00000577988 SMARCC1Q92922 1105 aaPredicted RBP18.47■□□□□ 0.55
SNORD3B-1-201ENST00000577988 TMOD3Q9NYL9 352 aa18.47■□□□□ 0.55
SNORD3B-1-201ENST00000577988 TXNRD1Q16881 649 aa18.46■□□□□ 0.55
SNORD3B-1-201ENST00000577988 GNAT3A8MTJ3 354 aa18.45■□□□□ 0.54
SNORD3B-1-201ENST00000577988 WDR43Q15061 677 aaKnown RBP eCLIP18.45■□□□□ 0.543e-34■■■■■ 689.1
SNORD3B-1-201ENST00000577988 SLC27A3Q5K4L6 730 aa18.45■□□□□ 0.54
SNORD3B-1-201ENST00000577988 NBPF14Q5TI25 921 aa18.45■□□□□ 0.54
SNORD3B-1-201ENST00000577988 PIGBQ92521 554 aa18.45■□□□□ 0.54
SNORD3B-1-201ENST00000577988 PHACTR3Q96KR7 559 aa18.45■□□□□ 0.54
SNORD3B-1-201ENST00000577988 TOGARAM1Q9Y4F4 1720 aa18.44■□□□□ 0.54
SNORD3B-1-201ENST00000577988 CABP4P57796 275 aa18.44■□□□□ 0.54
SNORD3B-1-201ENST00000577988 PROM2Q8N271 834 aa18.44■□□□□ 0.54
SNORD3B-1-201ENST00000577988 SCN11AQ9UI33 1791 aa18.44■□□□□ 0.54
SNORD3B-1-201ENST00000577988 RREB1Q92766 1687 aa18.44■□□□□ 0.54
SNORD3B-1-201ENST00000577988 KDM6AO15550 1401 aaPredicted RBP18.43■□□□□ 0.54
SNORD3B-1-201ENST00000577988 RNMTO43148 476 aaKnown RBP18.43■□□□□ 0.54
SNORD3B-1-201ENST00000577988 HTATSF1O43719 755 aaKnown RBP18.43■□□□□ 0.54
SNORD3B-1-201ENST00000577988 PLEKHF1Q96S99 279 aa18.43■□□□□ 0.54
SNORD3B-1-201ENST00000577988 MAP3K5Q99683 1374 aa18.42■□□□□ 0.54
SNORD3B-1-201ENST00000577988 MAPK8IP3Q9UPT6 1336 aa18.41■□□□□ 0.54
SNORD3B-1-201ENST00000577988 LY75O60449 1722 aa18.4■□□□□ 0.54
SNORD3B-1-201ENST00000577988 VIRMAQ69YN4 1812 aaKnown RBP18.4■□□□□ 0.54
SNORD3B-1-201ENST00000577988 RTF1Q92541 710 aaKnown RBP18.4■□□□□ 0.54
SNORD3B-1-201ENST00000577988 SLC52A2Q9HAB3 445 aa18.4■□□□□ 0.54
SNORD3B-1-201ENST00000577988 LGR6Q9HBX8 967 aa18.4■□□□□ 0.54
SNORD3B-1-201ENST00000577988 ADAMTS7Q9UKP4 1686 aa18.4■□□□□ 0.54
SNORD3B-1-201ENST00000577988 NFATC2IPQ8NCF5 419 aa18.39■□□□□ 0.53
SNORD3B-1-201ENST00000577988 NUP188Q5SRE5 1749 aa18.39■□□□□ 0.53
SNORD3B-1-201ENST00000577988 PALLDQ8WX93 1383 aa18.39■□□□□ 0.53
SNORD3B-1-201ENST00000577988 NFE2L2Q16236 605 aa18.38■□□□□ 0.53
SNORD3B-1-201ENST00000577988 IL17REQ8NFR9 667 aa18.38■□□□□ 0.53
SNORD3B-1-201ENST00000577988 ATG3Q9NT62 314 aa18.38■□□□□ 0.53
SNORD3B-1-201ENST00000577988 ADAMTS8Q9UP79 889 aa18.38■□□□□ 0.53
SNORD3B-1-201ENST00000577988 TEFQ10587 303 aa18.37■□□□□ 0.53
SNORD3B-1-201ENST00000577988 RUNDC1Q96C34 613 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms