RNA–Protein interactions for RNA: ENST00000577913.1

BRIP1-203, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 466 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-203ENST00000577913 BRINP3Q76B58 766 aa7.06□□□□□ -1.28
BRIP1-203ENST00000577913 CFAP53Q96M91 514 aa7.06□□□□□ -1.28
BRIP1-203ENST00000577913 EMILIN3Q9NT22 766 aa7.06□□□□□ -1.28
BRIP1-203ENST00000577913 USP6P35125 1406 aa7.06□□□□□ -1.28
BRIP1-203ENST00000577913 MST1RQ04912 1400 aa7.06□□□□□ -1.28
BRIP1-203ENST00000577913 FMN2Q9NZ56 1722 aa7.06□□□□□ -1.28
BRIP1-203ENST00000577913 NPHP3Q7Z494 1330 aa7.05□□□□□ -1.28
BRIP1-203ENST00000577913 CPSF1Q10570 1443 aaKnown RBP7.05□□□□□ -1.28
BRIP1-203ENST00000577913 NCOA3Q9Y6Q9 1424 aa7.05□□□□□ -1.28
BRIP1-203ENST00000577913 CCER2I3L3R5 266 aa7.05□□□□□ -1.28
BRIP1-203ENST00000577913 U2SURPO15042 1029 aaKnown RBP7.05□□□□□ -1.28
BRIP1-203ENST00000577913 AMPHP49418 695 aa7.05□□□□□ -1.28
BRIP1-203ENST00000577913 MTHFSP49914 203 aa7.05□□□□□ -1.28
BRIP1-203ENST00000577913 NLRP13Q86W25 1043 aa7.05□□□□□ -1.28
BRIP1-203ENST00000577913 LTV1Q96GA3 475 aaPredicted RBP7.05□□□□□ -1.28
BRIP1-203ENST00000577913 USP32Q8NFA0 1604 aa7.05□□□□□ -1.28
BRIP1-203ENST00000577913 TTC21AQ8NDW8 1320 aa7.04□□□□□ -1.28
BRIP1-203ENST00000577913 DCCP43146 1447 aa7.04□□□□□ -1.28
BRIP1-203ENST00000577913 DPYSL4O14531 572 aa7.04□□□□□ -1.28
BRIP1-203ENST00000577913 CERKQ8TCT0 537 aa7.04□□□□□ -1.28
BRIP1-203ENST00000577913 CABLES1Q8TDN4 633 aa7.04□□□□□ -1.28
BRIP1-203ENST00000577913 PODXL2Q9NZ53 605 aa7.04□□□□□ -1.28
BRIP1-203ENST00000577913 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.04□□□□□ -1.28
BRIP1-203ENST00000577913 SALL2Q9Y467 1007 aaPredicted RBP7.04□□□□□ -1.28
BRIP1-203ENST00000577913 POLR3AO14802 1390 aaPredicted RBP7.04□□□□□ -1.28
BRIP1-203ENST00000577913 NSD2O96028 1365 aa7.04□□□□□ -1.28
BRIP1-203ENST00000577913 PARD3Q8TEW0 1356 aa7.04□□□□□ -1.28
BRIP1-203ENST00000577913 ITSN1Q15811 1721 aa7.04□□□□□ -1.28
BRIP1-203ENST00000577913 RGPD8O14715 1765 aaPredicted RBP7.03□□□□□ -1.28
BRIP1-203ENST00000577913 TESPA1A2RU30 521 aaPredicted RBP7.03□□□□□ -1.28
BRIP1-203ENST00000577913 NUTM2BA6NNL0 878 aaPredicted RBP7.03□□□□□ -1.28
BRIP1-203ENST00000577913 NUTM2EB1AL46 878 aaPredicted RBP7.03□□□□□ -1.28
BRIP1-203ENST00000577913 ZC3H6P61129 1189 aaKnown RBP7.03□□□□□ -1.28
BRIP1-203ENST00000577913 NUTM2AQ8IVF1 878 aaPredicted RBP7.03□□□□□ -1.28
BRIP1-203ENST00000577913 EMILIN1Q9Y6C2 1016 aa7.03□□□□□ -1.28
BRIP1-203ENST00000577913 HNRNPUQ00839 825 aaKnown RBP eCLIP7.02□□□□□ -1.29
BRIP1-203ENST00000577913 BRD4O60885 1362 aaPredicted RBP7.02□□□□□ -1.29
BRIP1-203ENST00000577913 LTBP4Q8N2S1 1624 aa7.01□□□□□ -1.29
BRIP1-203ENST00000577913 TOPAZ1Q8N9V7 1692 aa7.01□□□□□ -1.29
BRIP1-203ENST00000577913 NPC1L1Q9UHC9 1359 aa7.01□□□□□ -1.29
BRIP1-203ENST00000577913 U2AF1L5P0DN76 240 aaPredicted RBP7.01□□□□□ -1.29
BRIP1-203ENST00000577913 U2AF1Q01081 240 aaKnown RBP eCLIP7.01□□□□□ -1.29
BRIP1-203ENST00000577913 PDIA6Q15084 440 aa7.01□□□□□ -1.29
BRIP1-203ENST00000577913 SMYD5Q6GMV2 418 aa7.01□□□□□ -1.29
BRIP1-203ENST00000577913 CCDC146Q8IYE0 955 aa7.01□□□□□ -1.29
BRIP1-203ENST00000577913 UPF1Q92900 1129 aaKnown RBP eCLIP7.01□□□□□ -1.29
BRIP1-203ENST00000577913 NUDCQ9Y266 331 aa7.01□□□□□ -1.29
BRIP1-203ENST00000577913 SPDYE16A6NNV3 312 aaPredicted RBP7□□□□□ -1.29
BRIP1-203ENST00000577913 DIAPH1O60610 1272 aaKnown RBP7□□□□□ -1.29
BRIP1-203ENST00000577913 CSB-PGBD3P0DP91 1061 aa7□□□□□ -1.29
BRIP1-203ENST00000577913 MAP3K9P80192 1104 aa7□□□□□ -1.29
BRIP1-203ENST00000577913 CHRNA2Q15822 529 aa7□□□□□ -1.29
BRIP1-203ENST00000577913 POLKQ9UBT6 870 aa7□□□□□ -1.29
BRIP1-203ENST00000577913 XIRP1Q702N8 1843 aaKnown RBP6.99□□□□□ -1.29
BRIP1-203ENST00000577913 ADAMTS2O95450 1211 aa6.99□□□□□ -1.29
BRIP1-203ENST00000577913 GCP02774 474 aa6.99□□□□□ -1.29
BRIP1-203ENST00000577913 NEFMP07197 916 aa6.99□□□□□ -1.29
BRIP1-203ENST00000577913 HMOX1P09601 288 aa6.99□□□□□ -1.29
BRIP1-203ENST00000577913 KCNH5Q8NCM2 988 aa6.99□□□□□ -1.29
BRIP1-203ENST00000577913 ZC3H15Q8WU90 426 aaKnown RBP6.99□□□□□ -1.29
BRIP1-203ENST00000577913 LRRC59Q96AG4 307 aaKnown RBP6.99□□□□□ -1.29
BRIP1-203ENST00000577913 ADAMTS8Q9UP79 889 aa6.99□□□□□ -1.29
BRIP1-203ENST00000577913 AKAP12Q02952 1782 aa6.99□□□□□ -1.29
BRIP1-203ENST00000577913 TNS3Q68CZ2 1445 aa6.99□□□□□ -1.29
BRIP1-203ENST00000577913 KIF1AQ12756 1690 aa6.99□□□□□ -1.29
BRIP1-203ENST00000577913 KIF20BQ96Q89 1820 aa6.99□□□□□ -1.29
BRIP1-203ENST00000577913 MAP3K19Q56UN5 1328 aa6.99□□□□□ -1.29
BRIP1-203ENST00000577913 SPATA31A3Q5VYP0 1347 aa6.99□□□□□ -1.29
BRIP1-203ENST00000577913 ARHGEF10O15013 1369 aa6.98□□□□□ -1.29
BRIP1-203ENST00000577913 EVA1CP58658 441 aa6.98□□□□□ -1.29
BRIP1-203ENST00000577913 HSP90AB2PQ58FF8 381 aa6.98□□□□□ -1.29
BRIP1-203ENST00000577913 PNISRQ8TF01 805 aaKnown RBP6.98□□□□□ -1.29
BRIP1-203ENST00000577913 SLC24A3Q9HC58 644 aa6.98□□□□□ -1.29
BRIP1-203ENST00000577913 PRDM11Q9NQV5 511 aa6.98□□□□□ -1.29
BRIP1-203ENST00000577913 MON2Q7Z3U7 1717 aa6.98□□□□□ -1.29
BRIP1-203ENST00000577913 SBNO1A3KN83 1393 aa6.97□□□□□ -1.29
BRIP1-203ENST00000577913 MLLT3P42568 568 aaPredicted RBP6.97□□□□□ -1.29
BRIP1-203ENST00000577913 MEX3CQ5U5Q3 659 aaKnown RBP6.97□□□□□ -1.29
BRIP1-203ENST00000577913 SSH2Q76I76 1423 aa6.97□□□□□ -1.29
BRIP1-203ENST00000577913 USHBP1Q8N6Y0 703 aa6.97□□□□□ -1.29
BRIP1-203ENST00000577913 OXER1Q8TDS5 423 aa6.97□□□□□ -1.29
BRIP1-203ENST00000577913 STRN4Q9NRL3 753 aa6.97□□□□□ -1.29
BRIP1-203ENST00000577913 RRP7AQ9Y3A4 280 aaKnown RBP6.97□□□□□ -1.29
BRIP1-203ENST00000577913 SOS2Q07890 1332 aaPredicted RBP6.97□□□□□ -1.29
BRIP1-203ENST00000577913 MAPK8IP3Q9UPT6 1336 aa6.97□□□□□ -1.29
BRIP1-203ENST00000577913 ROBO1Q9Y6N7 1651 aa6.96□□□□□ -1.29
BRIP1-203ENST00000577913 USP31Q70CQ4 1352 aa6.96□□□□□ -1.29
BRIP1-203ENST00000577913 NRKQ7Z2Y5 1582 aa6.96□□□□□ -1.29
BRIP1-203ENST00000577913 OVOS2A0A0J9YW53 1432 aa6.96□□□□□ -1.3
BRIP1-203ENST00000577913 OVOS2Q6IE36 1432 aa6.96□□□□□ -1.3
BRIP1-203ENST00000577913 CENPBP07199 599 aaPredicted RBP6.96□□□□□ -1.3
BRIP1-203ENST00000577913 HOXC9P31274 260 aa6.96□□□□□ -1.3
BRIP1-203ENST00000577913 EIF4A2Q14240 407 aaKnown RBP6.96□□□□□ -1.3
BRIP1-203ENST00000577913 SCUBE2Q9NQ36 999 aa6.96□□□□□ -1.3
BRIP1-203ENST00000577913 NLRP2Q9NX02 1062 aa6.96□□□□□ -1.3
BRIP1-203ENST00000577913 PXDNQ92626 1479 aa6.96□□□□□ -1.3
BRIP1-203ENST00000577913 PIK3C2AO00443 1686 aa6.96□□□□□ -1.3
BRIP1-203ENST00000577913 SMG6Q86US8 1419 aaKnown RBP6.95□□□□□ -1.3
BRIP1-203ENST00000577913 TBC1D12O60347 775 aa6.95□□□□□ -1.3
BRIP1-203ENST00000577913 PRKAR2BP31323 418 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms