RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 CAPN15O75808 1086 aa19.36■□□□□ 0.69
SREBF1-217ENST00000577897 ZNF692Q9BU19 519 aaPredicted RBP19.36■□□□□ 0.69
SREBF1-217ENST00000577897 EVC2Q86UK5 1308 aa19.35■□□□□ 0.69
SREBF1-217ENST00000577897 DNAJC5GQ8N7S2 189 aa19.35■□□□□ 0.69
SREBF1-217ENST00000577897 ANKRD24Q8TF21 1146 aa19.35■□□□□ 0.69
SREBF1-217ENST00000577897 PCNTO95613 3336 aa19.35■□□□□ 0.69
SREBF1-217ENST00000577897 COL23A1Q86Y22 540 aaPredicted RBP19.33■□□□□ 0.68
SREBF1-217ENST00000577897 WWC3Q9ULE0 1092 aa19.33■□□□□ 0.68
SREBF1-217ENST00000577897 LTN1O94822 1766 aa19.33■□□□□ 0.68
SREBF1-217ENST00000577897 DOT1LQ8TEK3 1739 aa19.33■□□□□ 0.68
SREBF1-217ENST00000577897 KTN1Q86UP2 1357 aaKnown RBP19.32■□□□□ 0.68
SREBF1-217ENST00000577897 PRIM1P49642 420 aaKnown RBP19.32■□□□□ 0.68
SREBF1-217ENST00000577897 COL13A1Q5TAT6 717 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-217ENST00000577897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.32■□□□□ 0.68
SREBF1-217ENST00000577897 CCNL1Q9UK58 526 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-217ENST00000577897 LY75O60449 1722 aa19.31■□□□□ 0.68
SREBF1-217ENST00000577897 KIF3CO14782 793 aa19.3■□□□□ 0.68
SREBF1-217ENST00000577897 PRELPP51888 382 aa19.3■□□□□ 0.68
SREBF1-217ENST00000577897 HSPA5P11021 654 aaKnown RBP19.29■□□□□ 0.68
SREBF1-217ENST00000577897 CD2APQ9Y5K6 639 aa19.29■□□□□ 0.68
SREBF1-217ENST00000577897 ANKRD36BQ8N2N9 1353 aa19.29■□□□□ 0.68
SREBF1-217ENST00000577897 CENPBP07199 599 aaPredicted RBP19.28■□□□□ 0.68
SREBF1-217ENST00000577897 MIER1Q8N108 512 aa19.28■□□□□ 0.68
SREBF1-217ENST00000577897 NME9Q86XW9 330 aa19.27■□□□□ 0.68
SREBF1-217ENST00000577897 MON2Q7Z3U7 1717 aa19.27■□□□□ 0.68
SREBF1-217ENST00000577897 NSD2O96028 1365 aa19.27■□□□□ 0.68
SREBF1-217ENST00000577897 TNS4Q8IZW8 715 aa19.26■□□□□ 0.67
SREBF1-217ENST00000577897 LTV1Q96GA3 475 aaPredicted RBP19.26■□□□□ 0.67
SREBF1-217ENST00000577897 IGSF1Q8N6C5 1336 aa19.25■□□□□ 0.67
SREBF1-217ENST00000577897 USP31Q70CQ4 1352 aa19.24■□□□□ 0.67
SREBF1-217ENST00000577897 USP47Q96K76 1375 aa19.24■□□□□ 0.67
SREBF1-217ENST00000577897 DDX10Q13206 875 aaKnown RBP19.24■□□□□ 0.67
SREBF1-217ENST00000577897 USP54Q70EL1 1684 aa19.24■□□□□ 0.67
SREBF1-217ENST00000577897 C5P01031 1676 aa19.22■□□□□ 0.67
SREBF1-217ENST00000577897 ANP32CO43423 234 aa19.21■□□□□ 0.67
SREBF1-217ENST00000577897 TOMM70O94826 608 aa19.21■□□□□ 0.67
SREBF1-217ENST00000577897 WDR90Q96KV7 1748 aa19.21■□□□□ 0.67
SREBF1-217ENST00000577897 FAM208AQ9UK61 1670 aaKnown RBP19.2■□□□□ 0.66
SREBF1-217ENST00000577897 CARD11Q9BXL7 1154 aa19.2■□□□□ 0.66
SREBF1-217ENST00000577897 JMYQ8N9B5 988 aa19.19■□□□□ 0.66
SREBF1-217ENST00000577897 ROCK2O75116 1388 aaKnown RBP19.19■□□□□ 0.66
SREBF1-217ENST00000577897 SLC34A2O95436 690 aa19.18■□□□□ 0.66
SREBF1-217ENST00000577897 FLAD1Q8NFF5 587 aa19.18■□□□□ 0.66
SREBF1-217ENST00000577897 ZCRB1Q8TBF4 217 aaKnown RBP19.18■□□□□ 0.66
SREBF1-217ENST00000577897 KLRG1Q96E93 195 aa19.18■□□□□ 0.66
SREBF1-217ENST00000577897 SBNO2Q9Y2G9 1366 aa19.18■□□□□ 0.66
SREBF1-217ENST00000577897 MEGF6O75095 1541 aa19.16■□□□□ 0.66
SREBF1-217ENST00000577897 PHF14O94880 888 aa19.16■□□□□ 0.66
SREBF1-217ENST00000577897 IP6K1Q92551 441 aa19.16■□□□□ 0.66
SREBF1-217ENST00000577897 TMC1Q8TDI8 760 aa19.15■□□□□ 0.66
SREBF1-217ENST00000577897 CD163L1Q9NR16 1453 aa19.15■□□□□ 0.66
SREBF1-217ENST00000577897 AK7Q96M32 723 aa19.14■□□□□ 0.65
SREBF1-217ENST00000577897 HTRA3P83110 453 aa19.13■□□□□ 0.65
SREBF1-217ENST00000577897 HDGFL2Q7Z4V5 671 aaPredicted RBP19.13■□□□□ 0.65
SREBF1-217ENST00000577897 PALLDQ8WX93 1383 aa19.13■□□□□ 0.65
SREBF1-217ENST00000577897 RGPD2P0DJD1 1756 aa19.13■□□□□ 0.65
SREBF1-217ENST00000577897 TAF1LQ8IZX4 1826 aa19.13■□□□□ 0.65
SREBF1-217ENST00000577897 C4BP0C0L5 1744 aa19.12■□□□□ 0.65
SREBF1-217ENST00000577897 CICQ96RK0 1608 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-217ENST00000577897 SMIM5Q71RC9 77 aa19.12■□□□□ 0.65
SREBF1-217ENST00000577897 NMRK2Q9NPI5 230 aa19.12■□□□□ 0.65
SREBF1-217ENST00000577897 EDC4Q6P2E9 1401 aaKnown RBP19.11■□□□□ 0.65
SREBF1-217ENST00000577897 SLC24A1O60721 1099 aa19.11■□□□□ 0.65
SREBF1-217ENST00000577897 AMIGO3Q86WK7 504 aa19.11■□□□□ 0.65
SREBF1-217ENST00000577897 TOGARAM1Q9Y4F4 1720 aa19.11■□□□□ 0.65
SREBF1-217ENST00000577897 WASHC2AQ641Q2 1341 aa19.1■□□□□ 0.65
SREBF1-217ENST00000577897 CCER2I3L3R5 266 aa19.1■□□□□ 0.65
SREBF1-217ENST00000577897 AMPHP49418 695 aa19.09■□□□□ 0.65
SREBF1-217ENST00000577897 MPRIPQ6WCQ1 1025 aa19.09■□□□□ 0.65
SREBF1-217ENST00000577897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.08■□□□□ 0.64
SREBF1-217ENST00000577897 HMGB2P26583 209 aaKnown RBP19.08■□□□□ 0.64
SREBF1-217ENST00000577897 HOXC9P31274 260 aa19.08■□□□□ 0.64
SREBF1-217ENST00000577897 C16orf71Q8IYS4 520 aaPredicted RBP19.08■□□□□ 0.64
SREBF1-217ENST00000577897 USHBP1Q8N6Y0 703 aa19.08■□□□□ 0.64
SREBF1-217ENST00000577897 RBM46Q8TBY0 533 aaKnown RBP19.08■□□□□ 0.64
SREBF1-217ENST00000577897 MAP3K19Q56UN5 1328 aa19.07■□□□□ 0.64
SREBF1-217ENST00000577897 SLC12A5Q9H2X9 1139 aa19.07■□□□□ 0.64
SREBF1-217ENST00000577897 BCS1LQ9Y276 419 aa19.07■□□□□ 0.64
SREBF1-217ENST00000577897 UBR3Q6ZT12 1888 aa19.07■□□□□ 0.64
SREBF1-217ENST00000577897 A0A1W2PP64 1363 aa19.06■□□□□ 0.64
SREBF1-217ENST00000577897 FBLN1P23142 703 aa19.06■□□□□ 0.64
SREBF1-217ENST00000577897 NSD3Q9BZ95 1437 aa19.06■□□□□ 0.64
SREBF1-217ENST00000577897 ARHGAP27Q6ZUM4 889 aa19.05■□□□□ 0.64
SREBF1-217ENST00000577897 RAPGEF4Q8WZA2 1011 aa19.05■□□□□ 0.64
SREBF1-217ENST00000577897 PXDNLA1KZ92 1463 aa19.04■□□□□ 0.64
SREBF1-217ENST00000577897 FSTL1Q12841 308 aa19.04■□□□□ 0.64
SREBF1-217ENST00000577897 TERF2IPQ9NYB0 399 aa19.04■□□□□ 0.64
SREBF1-217ENST00000577897 N4BP2Q86UW6 1770 aaPredicted RBP19.04■□□□□ 0.64
SREBF1-217ENST00000577897 KIF7Q2M1P5 1343 aa19.03■□□□□ 0.64
SREBF1-217ENST00000577897 TATP17735 454 aaPredicted RBP19.03■□□□□ 0.64
SREBF1-217ENST00000577897 NBPF6Q5VWK0 638 aa19.03■□□□□ 0.64
SREBF1-217ENST00000577897 COG3Q96JB2 828 aa19.03■□□□□ 0.64
SREBF1-217ENST00000577897 NBPF4Q96M43 638 aa19.03■□□□□ 0.64
SREBF1-217ENST00000577897 PCDH11XQ9BZA7 1347 aa19.02■□□□□ 0.64
SREBF1-217ENST00000577897 PCDH11YQ9BZA8 1340 aa19.02■□□□□ 0.64
SREBF1-217ENST00000577897 SSFA2P28290 1259 aa19.02■□□□□ 0.64
SREBF1-217ENST00000577897 SMARCC1Q92922 1105 aaPredicted RBP19.02■□□□□ 0.64
SREBF1-217ENST00000577897 CGNL1Q0VF96 1302 aa19.01■□□□□ 0.63
SREBF1-217ENST00000577897 ST20-MTHFSA0A0A6YYL1 179 aa19.01■□□□□ 0.63
SREBF1-217ENST00000577897 MMP10P09238 476 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 380.6 ms