RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 GLRX3O76003 335 aaKnown RBP12.29□□□□□ -0.44
PTPRM-205ENST00000577827 NLRP6P59044 892 aa12.29□□□□□ -0.44
PTPRM-205ENST00000577827 NEMFO60524 1076 aa12.29□□□□□ -0.44
PTPRM-205ENST00000577827 NFXL1Q6ZNB6 911 aa12.29□□□□□ -0.44
PTPRM-205ENST00000577827 ZKSCAN5Q9Y2L8 839 aa12.29□□□□□ -0.44
PTPRM-205ENST00000577827 NUP153P49790 1475 aaKnown RBP12.29□□□□□ -0.44
PTPRM-205ENST00000577827 CBFA2T2O43439 604 aa12.28□□□□□ -0.44
PTPRM-205ENST00000577827 OFD1O75665 1012 aa12.28□□□□□ -0.44
PTPRM-205ENST00000577827 APPP05067 770 aa12.28□□□□□ -0.44
PTPRM-205ENST00000577827 PUS7Q96PZ0 661 aaKnown RBP12.28□□□□□ -0.44
PTPRM-205ENST00000577827 ZMYND15Q9H091 742 aa12.28□□□□□ -0.44
PTPRM-205ENST00000577827 LIMCH1Q9UPQ0 1083 aa12.28□□□□□ -0.44
PTPRM-205ENST00000577827 DNMT1P26358 1616 aaKnown RBP12.28□□□□□ -0.44
PTPRM-205ENST00000577827 SRGAP3O43295 1099 aa12.28□□□□□ -0.44
PTPRM-205ENST00000577827 EXOC6BQ9Y2D4 811 aa12.28□□□□□ -0.44
PTPRM-205ENST00000577827 TULP1O00294 542 aaPredicted RBP12.28□□□□□ -0.44
PTPRM-205ENST00000577827 CAVIN2O95810 425 aa12.28□□□□□ -0.44
PTPRM-205ENST00000577827 UPF3BQ9BZI7 483 aaKnown RBP12.28□□□□□ -0.44
PTPRM-205ENST00000577827 C14orf93Q9H972 538 aaKnown RBP12.28□□□□□ -0.44
PTPRM-205ENST00000577827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.28□□□□□ -0.44
PTPRM-205ENST00000577827 ERICH2A1L162 156 aa12.28□□□□□ -0.44
PTPRM-205ENST00000577827 USP25Q9UHP3 1055 aa12.28□□□□□ -0.44
PTPRM-205ENST00000577827 ME1P48163 572 aa12.27□□□□□ -0.45
PTPRM-205ENST00000577827 FOSBP53539 338 aa12.27□□□□□ -0.45
PTPRM-205ENST00000577827 PDILTQ8N807 584 aa12.27□□□□□ -0.45
PTPRM-205ENST00000577827 ANAPC15P60006 121 aa12.27□□□□□ -0.45
PTPRM-205ENST00000577827 PLEKHO1Q53GL0 409 aaPredicted RBP12.27□□□□□ -0.45
PTPRM-205ENST00000577827 NEUROD6Q96NK8 337 aa12.27□□□□□ -0.45
PTPRM-205ENST00000577827 CGNQ9P2M7 1197 aaKnown RBP12.27□□□□□ -0.45
PTPRM-205ENST00000577827 CCDC61Q9Y6R9 512 aa12.27□□□□□ -0.45
PTPRM-205ENST00000577827 CASTP20810 708 aaKnown RBP12.26□□□□□ -0.45
PTPRM-205ENST00000577827 UBE2HP62256 183 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 LEKR1Q6ZMV7 388 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 RUFY1Q96T51 708 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 RBM25P49756 843 aaKnown RBP12.26□□□□□ -0.45
PTPRM-205ENST00000577827 FILIP1LQ4L180 1135 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 CWC27Q6UX04 472 aaKnown RBP12.26□□□□□ -0.45
PTPRM-205ENST00000577827 SMARCE1Q969G3 411 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 THUMPD2Q9BTF0 503 aaKnown RBP12.26□□□□□ -0.45
PTPRM-205ENST00000577827 DDX19AQ9NUU7 478 aaKnown RBP12.26□□□□□ -0.45
PTPRM-205ENST00000577827 XBP1P17861 261 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 PIP4K2AP48426 406 aaPredicted RBP12.26□□□□□ -0.45
PTPRM-205ENST00000577827 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
PTPRM-205ENST00000577827 DACH1Q9UI36 760 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 ADGRL2O95490 1459 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 WDR62O43379 1518 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 DUOX2Q9NRD8 1548 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 SEC24BO95487 1268 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 PTPN14Q15678 1187 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 WASHC4Q2M389 1173 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 FMNL2Q96PY5 1086 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 IL1RAPL2Q9NP60 686 aa12.26□□□□□ -0.45
PTPRM-205ENST00000577827 SMTNL1A8MU46 457 aa12.25□□□□□ -0.45
PTPRM-205ENST00000577827 CTAGE5O15320 804 aa12.25□□□□□ -0.45
PTPRM-205ENST00000577827 SMARCA5O60264 1052 aaPredicted RBP12.25□□□□□ -0.45
PTPRM-205ENST00000577827 KIF18AQ8NI77 898 aa12.25□□□□□ -0.45
PTPRM-205ENST00000577827 ERLIN1O75477 346 aa12.25□□□□□ -0.45
PTPRM-205ENST00000577827 ADCY5O95622 1261 aa12.25□□□□□ -0.45
PTPRM-205ENST00000577827 SERPINC1P01008 464 aa12.25□□□□□ -0.45
PTPRM-205ENST00000577827 RAPGEF4Q8WZA2 1011 aa12.25□□□□□ -0.45
PTPRM-205ENST00000577827 TERF1P54274 439 aa12.25□□□□□ -0.45
PTPRM-205ENST00000577827 PSME1Q06323 249 aa12.25□□□□□ -0.45
PTPRM-205ENST00000577827 RLBP1P12271 317 aa12.24□□□□□ -0.45
PTPRM-205ENST00000577827 AIMP1Q12904 312 aaKnown RBP12.24□□□□□ -0.45
PTPRM-205ENST00000577827 KIF21AQ7Z4S6 1674 aa12.24□□□□□ -0.45
PTPRM-205ENST00000577827 EIF3JO75822 258 aaKnown RBP12.24□□□□□ -0.45
PTPRM-205ENST00000577827 FILIP1Q7Z7B0 1213 aa12.24□□□□□ -0.45
PTPRM-205ENST00000577827 PCMTD1Q96MG8 357 aaPredicted RBP12.24□□□□□ -0.45
PTPRM-205ENST00000577827 ZBTB40Q9NUA8 1239 aa12.24□□□□□ -0.45
PTPRM-205ENST00000577827 ANO10Q9NW15 660 aa12.24□□□□□ -0.45
PTPRM-205ENST00000577827 GCC2Q8IWJ2 1684 aa12.24□□□□□ -0.45
PTPRM-205ENST00000577827 CDR1P51861 262 aa12.24□□□□□ -0.45
PTPRM-205ENST00000577827 CCDC83Q8IWF9 413 aa12.24□□□□□ -0.45
PTPRM-205ENST00000577827 STX6O43752 255 aa12.23□□□□□ -0.45
PTPRM-205ENST00000577827 UBXN4Q92575 508 aa12.23□□□□□ -0.45
PTPRM-205ENST00000577827 TMX3Q96JJ7 454 aa12.23□□□□□ -0.45
PTPRM-205ENST00000577827 BRMS1Q9HCU9 246 aa12.23□□□□□ -0.45
PTPRM-205ENST00000577827 RRAGDQ9NQL2 400 aaPredicted RBP12.23□□□□□ -0.45
PTPRM-205ENST00000577827 CEBPZQ03701 1054 aaKnown RBP12.23□□□□□ -0.45
PTPRM-205ENST00000577827 AACSQ86V21 672 aa12.23□□□□□ -0.45
PTPRM-205ENST00000577827 RRS1Q15050 365 aaKnown RBP12.23□□□□□ -0.45
PTPRM-205ENST00000577827 ANKRD44Q8N8A2 993 aa12.23□□□□□ -0.45
PTPRM-205ENST00000577827 DNAJC2Q99543 621 aaKnown RBP12.23□□□□□ -0.45
PTPRM-205ENST00000577827 NOS1P29475 1434 aa12.23□□□□□ -0.45
PTPRM-205ENST00000577827 CBX1P83916 185 aa12.23□□□□□ -0.45
PTPRM-205ENST00000577827 STK3Q13188 491 aa12.23□□□□□ -0.45
PTPRM-205ENST00000577827 SART3Q15020 963 aaKnown RBP12.23□□□□□ -0.45
PTPRM-205ENST00000577827 TSPYL1Q9H0U9 437 aa12.23□□□□□ -0.45
PTPRM-205ENST00000577827 MAP4K4O95819 1239 aaPredicted RBP12.22□□□□□ -0.45
PTPRM-205ENST00000577827 TXNDC2Q86VQ3 553 aa12.22□□□□□ -0.45
PTPRM-205ENST00000577827 RBM27Q9P2N5 1060 aaKnown RBP12.22□□□□□ -0.45
PTPRM-205ENST00000577827 MARCH6O60337 910 aa12.22□□□□□ -0.45
PTPRM-205ENST00000577827 TNNT1P13805 278 aa12.22□□□□□ -0.45
PTPRM-205ENST00000577827 SDSP20132 328 aa12.22□□□□□ -0.45
PTPRM-205ENST00000577827 SFPQP23246 707 aaKnown RBP eCLIP12.22□□□□□ -0.45
PTPRM-205ENST00000577827 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
PTPRM-205ENST00000577827 PAXBP1Q9Y5B6 917 aa12.22□□□□□ -0.45
PTPRM-205ENST00000577827 GSDMDP57764 484 aa12.21□□□□□ -0.45
PTPRM-205ENST00000577827 NOLC1Q14978 699 aaKnown RBP eCLIP12.21□□□□□ -0.45
PTPRM-205ENST00000577827 MBIPQ9NS73 344 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms