RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 LRRC37A3O60309 1634 aa17.62■□□□□ 0.41
RNF43-202ENST00000577625 FRAT1Q92837 279 aaPredicted RBP17.62■□□□□ 0.41
RNF43-202ENST00000577625 CFAP44Q96MT7 982 aa17.62■□□□□ 0.41
RNF43-202ENST00000577625 MBIPQ9NS73 344 aa17.62■□□□□ 0.41
RNF43-202ENST00000577625 MTHFSDQ2M296 383 aaKnown RBP17.61■□□□□ 0.41
RNF43-202ENST00000577625 ZBTB7CA1YPR0 619 aa17.6■□□□□ 0.41
RNF43-202ENST00000577625 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
RNF43-202ENST00000577625 BRINP3Q76B58 766 aa17.6■□□□□ 0.41
RNF43-202ENST00000577625 NPM2Q86SE8 214 aaKnown RBP17.6■□□□□ 0.41
RNF43-202ENST00000577625 SSH1Q8WYL5 1049 aa17.6■□□□□ 0.41
RNF43-202ENST00000577625 TCERG1O14776 1098 aaKnown RBP17.59■□□□□ 0.41
RNF43-202ENST00000577625 CRB1P82279 1406 aa17.59■□□□□ 0.41
RNF43-202ENST00000577625 MCM10Q7L590 875 aa17.59■□□□□ 0.41
RNF43-202ENST00000577625 PANK1Q8TE04 598 aa17.59■□□□□ 0.41
RNF43-202ENST00000577625 SMC4Q9NTJ3 1288 aa17.59■□□□□ 0.41
RNF43-202ENST00000577625 COL18A1P39060 1754 aa17.58■□□□□ 0.41
RNF43-202ENST00000577625 NCAPD2Q15021 1401 aa17.58■□□□□ 0.41
RNF43-202ENST00000577625 USHBP1Q8N6Y0 703 aa17.58■□□□□ 0.4
RNF43-202ENST00000577625 GAS2L2Q8NHY3 880 aa17.58■□□□□ 0.4
RNF43-202ENST00000577625 TNNQ9UQP3 1299 aa17.58■□□□□ 0.4
RNF43-202ENST00000577625 NBPF6Q5VWK0 638 aa17.57■□□□□ 0.4
RNF43-202ENST00000577625 ZNF428Q96B54 188 aa17.57■□□□□ 0.4
RNF43-202ENST00000577625 NBPF4Q96M43 638 aa17.57■□□□□ 0.4
RNF43-202ENST00000577625 RLBP1P12271 317 aa17.57■□□□□ 0.4
RNF43-202ENST00000577625 SPATA31A3Q5VYP0 1347 aa17.57■□□□□ 0.4
RNF43-202ENST00000577625 KDM2BQ8NHM5 1336 aa17.57■□□□□ 0.4
RNF43-202ENST00000577625 LMO7Q8WWI1 1683 aa17.56■□□□□ 0.4
RNF43-202ENST00000577625 ALDH1L2Q3SY69 923 aa17.56■□□□□ 0.4
RNF43-202ENST00000577625 ZKSCAN2Q63HK3 967 aa17.56■□□□□ 0.4
RNF43-202ENST00000577625 TSPYL6Q8N831 410 aa17.56■□□□□ 0.4
RNF43-202ENST00000577625 VAMP4O75379 141 aa17.55■□□□□ 0.4
RNF43-202ENST00000577625 LRRC59Q96AG4 307 aaKnown RBP17.55■□□□□ 0.4
RNF43-202ENST00000577625 DDRGK1Q96HY6 314 aa17.55■□□□□ 0.4
RNF43-202ENST00000577625 SLAIN2Q9P270 581 aa17.55■□□□□ 0.4
RNF43-202ENST00000577625 COG6Q9Y2V7 657 aa17.55■□□□□ 0.4
RNF43-202ENST00000577625 VIRMAQ69YN4 1812 aaKnown RBP17.55■□□□□ 0.4
RNF43-202ENST00000577625 CHL1O00533 1208 aa17.55■□□□□ 0.4
RNF43-202ENST00000577625 AAMPQ13685 434 aa17.55■□□□□ 0.4
RNF43-202ENST00000577625 AXIN2Q9Y2T1 843 aa17.55■□□□□ 0.4
RNF43-202ENST00000577625 NHSL1Q5SYE7 1610 aa17.54■□□□□ 0.4
RNF43-202ENST00000577625 MS4A1P11836 297 aa17.54■□□□□ 0.4
RNF43-202ENST00000577625 CENPQQ7L2Z9 268 aaPredicted RBP17.54■□□□□ 0.4
RNF43-202ENST00000577625 ABCC6O95255 1503 aa17.54■□□□□ 0.4
RNF43-202ENST00000577625 PDE4AP27815 886 aa17.53■□□□□ 0.4
RNF43-202ENST00000577625 ZC3H6P61129 1189 aaKnown RBP17.53■□□□□ 0.4
RNF43-202ENST00000577625 C8orf58Q8NAV2 365 aa17.53■□□□□ 0.4
RNF43-202ENST00000577625 ANKRD24Q8TF21 1146 aa17.53■□□□□ 0.4
RNF43-202ENST00000577625 RTF1Q92541 710 aaKnown RBP17.53■□□□□ 0.4
RNF43-202ENST00000577625 KIF16BQ96L93 1317 aa17.53■□□□□ 0.4
RNF43-202ENST00000577625 MAP3K5Q99683 1374 aa17.53■□□□□ 0.4
RNF43-202ENST00000577625 HTATSF1O43719 755 aaKnown RBP17.53■□□□□ 0.4
RNF43-202ENST00000577625 ABCA3Q99758 1704 aa17.53■□□□□ 0.4
RNF43-202ENST00000577625 BRPF1P55201 1214 aaPredicted RBP17.52■□□□□ 0.4
RNF43-202ENST00000577625 TWISTNBQ3B726 338 aaPredicted RBP17.52■□□□□ 0.4
RNF43-202ENST00000577625 CLUAP1Q96AJ1 413 aa17.52■□□□□ 0.4
RNF43-202ENST00000577625 BACH2Q9BYV9 841 aa17.52■□□□□ 0.4
RNF43-202ENST00000577625 FAM208AQ9UK61 1670 aaKnown RBP17.52■□□□□ 0.39
RNF43-202ENST00000577625 GNAT3A8MTJ3 354 aa17.52■□□□□ 0.39
RNF43-202ENST00000577625 TRIM27P14373 513 aa17.52■□□□□ 0.39
RNF43-202ENST00000577625 NFKBIBQ15653 356 aa17.52■□□□□ 0.39
RNF43-202ENST00000577625 CABLES1Q8TDN4 633 aa17.52■□□□□ 0.39
RNF43-202ENST00000577625 ATF7IPQ6VMQ6 1270 aa17.51■□□□□ 0.39
RNF43-202ENST00000577625 DZIP1LQ8IYY4 767 aaKnown RBP17.51■□□□□ 0.39
RNF43-202ENST00000577625 ZMYND15Q9H091 742 aa17.51■□□□□ 0.39
RNF43-202ENST00000577625 NOB1Q9ULX3 412 aaKnown RBP17.51■□□□□ 0.39
RNF43-202ENST00000577625 ERBB3P21860 1342 aa17.51■□□□□ 0.39
RNF43-202ENST00000577625 SOS2Q07890 1332 aaPredicted RBP17.51■□□□□ 0.39
RNF43-202ENST00000577625 ELL2O00472 640 aaPredicted RBP17.5■□□□□ 0.39
RNF43-202ENST00000577625 KIAA0232Q92628 1395 aa17.5■□□□□ 0.39
RNF43-202ENST00000577625 MVPQ14764 893 aaKnown RBP17.49■□□□□ 0.39
RNF43-202ENST00000577625 FTSJ3Q8IY81 847 aaKnown RBP17.49■□□□□ 0.39
RNF43-202ENST00000577625 IPO8O15397 1037 aaKnown RBP17.49■□□□□ 0.39
RNF43-202ENST00000577625 MRPL50Q8N5N7 158 aaKnown RBP17.49■□□□□ 0.39
RNF43-202ENST00000577625 CPDO75976 1380 aa17.48■□□□□ 0.39
RNF43-202ENST00000577625 KRT24Q2M2I5 525 aa17.47■□□□□ 0.39
RNF43-202ENST00000577625 IL17REQ8NFR9 667 aa17.47■□□□□ 0.39
RNF43-202ENST00000577625 VSIG10Q8N0Z9 540 aa17.46■□□□□ 0.39
RNF43-202ENST00000577625 MIS18AQ9NYP9 233 aa17.46■□□□□ 0.39
RNF43-202ENST00000577625 CEMIPQ8WUJ3 1361 aa17.46■□□□□ 0.39
RNF43-202ENST00000577625 TSPYL4Q9UJ04 414 aa17.46■□□□□ 0.39
RNF43-202ENST00000577625 KDM3BQ7LBC6 1761 aa17.45■□□□□ 0.38
RNF43-202ENST00000577625 LTBP4Q8N2S1 1624 aa17.45■□□□□ 0.38
RNF43-202ENST00000577625 HAP1P54257 671 aaPredicted RBP17.45■□□□□ 0.38
RNF43-202ENST00000577625 CHRNA2Q15822 529 aa17.44■□□□□ 0.38
RNF43-202ENST00000577625 ARHGAP45Q92619 1136 aa17.44■□□□□ 0.38
RNF43-202ENST00000577625 PLEKHO1Q53GL0 409 aaPredicted RBP17.43■□□□□ 0.38
RNF43-202ENST00000577625 DDX19BQ9UMR2 479 aa17.43■□□□□ 0.38
RNF43-202ENST00000577625 CACNA1FO60840 1977 aa17.43■□□□□ 0.38
RNF43-202ENST00000577625 ADAMTS7Q9UKP4 1686 aa17.43■□□□□ 0.38
RNF43-202ENST00000577625 AMOTQ4VCS5 1084 aa17.43■□□□□ 0.38
RNF43-202ENST00000577625 ZNF530Q6P9A1 599 aaPredicted RBP17.43■□□□□ 0.38
RNF43-202ENST00000577625 TMEM57Q8N5G2 664 aa17.43■□□□□ 0.38
RNF43-202ENST00000577625 ROBO1Q9Y6N7 1651 aa17.42■□□□□ 0.38
RNF43-202ENST00000577625 IGHDP01880 384 aa17.42■□□□□ 0.38
RNF43-202ENST00000577625 ITPRIPQ8IWB1 547 aa17.42■□□□□ 0.38
RNF43-202ENST00000577625 SIPA1L3O60292 1781 aaPredicted RBP17.42■□□□□ 0.38
RNF43-202ENST00000577625 AKAP4Q5JQC9 854 aa17.42■□□□□ 0.38
RNF43-202ENST00000577625 TAF7Q15545 349 aaPredicted RBP17.41■□□□□ 0.38
RNF43-202ENST00000577625 BABAM1Q9NWV8 329 aa17.41■□□□□ 0.38
RNF43-202ENST00000577625 PCDHB15Q9Y5E8 787 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms