RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 WASHC2AQ641Q2 1341 aa17.17■□□□□ 0.34
CSNK1D-206ENST00000577578 DOT1LQ8TEK3 1739 aa17.16■□□□□ 0.34
CSNK1D-206ENST00000577578 ZCRB1Q8TBF4 217 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-206ENST00000577578 POLKQ9UBT6 870 aa17.15■□□□□ 0.34
CSNK1D-206ENST00000577578 PKD1L3Q7Z443 1732 aa17.15■□□□□ 0.34
CSNK1D-206ENST00000577578 TXNRD1Q16881 649 aa17.14■□□□□ 0.33
CSNK1D-206ENST00000577578 PAPPAQ13219 1627 aa17.14■□□□□ 0.33
CSNK1D-206ENST00000577578 CASZ1Q86V15 1759 aa17.13■□□□□ 0.33
CSNK1D-206ENST00000577578 USHBP1Q8N6Y0 703 aa17.13■□□□□ 0.33
CSNK1D-206ENST00000577578 DDX54Q8TDD1 881 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-206ENST00000577578 RAPGEF4Q8WZA2 1011 aa17.13■□□□□ 0.33
CSNK1D-206ENST00000577578 ACSBG1Q96GR2 724 aa17.13■□□□□ 0.33
CSNK1D-206ENST00000577578 KIF7Q2M1P5 1343 aa17.13■□□□□ 0.33
CSNK1D-206ENST00000577578 ANO8Q9HCE9 1232 aaPredicted RBP17.12■□□□□ 0.33
CSNK1D-206ENST00000577578 LY75O60449 1722 aa17.1■□□□□ 0.33
CSNK1D-206ENST00000577578 PPM1GO15355 546 aaPredicted RBP17.1■□□□□ 0.33
CSNK1D-206ENST00000577578 TATP17735 454 aaPredicted RBP17.1■□□□□ 0.33
CSNK1D-206ENST00000577578 PLEKHG2Q9H7P9 1386 aa17.09■□□□□ 0.33
CSNK1D-206ENST00000577578 PCDH11XQ9BZA7 1347 aa17.08■□□□□ 0.32
CSNK1D-206ENST00000577578 PCDH11YQ9BZA8 1340 aa17.08■□□□□ 0.32
CSNK1D-206ENST00000577578 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.32
CSNK1D-206ENST00000577578 EYA1Q99502 592 aa17.08■□□□□ 0.32
CSNK1D-206ENST00000577578 TNNT2P45379 298 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-206ENST00000577578 PRIM1P49642 420 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-206ENST00000577578 KNSTRNQ9Y448 316 aa17.07■□□□□ 0.32
CSNK1D-206ENST00000577578 PER1O15534 1290 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-206ENST00000577578 EIF4A2Q14240 407 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-206ENST00000577578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.06■□□□□ 0.32
CSNK1D-206ENST00000577578 TOGARAM1Q9Y4F4 1720 aa17.06■□□□□ 0.32
CSNK1D-206ENST00000577578 ITGB4P16144 1822 aa17.05■□□□□ 0.32
CSNK1D-206ENST00000577578 QSER1Q2KHR3 1735 aa17.05■□□□□ 0.32
CSNK1D-206ENST00000577578 CYP27B1O15528 508 aa17.05■□□□□ 0.32
CSNK1D-206ENST00000577578 SLC15A2Q16348 729 aa17.05■□□□□ 0.32
CSNK1D-206ENST00000577578 SLC27A3Q5K4L6 730 aa17.05■□□□□ 0.32
CSNK1D-206ENST00000577578 LRRC4BQ9NT99 713 aa17.05■□□□□ 0.32
CSNK1D-206ENST00000577578 IGSF1Q8N6C5 1336 aa17.04■□□□□ 0.32
CSNK1D-206ENST00000577578 MORC1Q86VD1 984 aa17.04■□□□□ 0.32
CSNK1D-206ENST00000577578 STK32BQ9NY57 414 aa17.04■□□□□ 0.32
CSNK1D-206ENST00000577578 NKX1-1Q15270 411 aaPredicted RBP17.03■□□□□ 0.32
CSNK1D-206ENST00000577578 SYTL4Q96C24 671 aaPredicted RBP17.03■□□□□ 0.32
CSNK1D-206ENST00000577578 SPON1Q9HCB6 807 aa17.03■□□□□ 0.32
CSNK1D-206ENST00000577578 PDGFDQ9GZP0 370 aaPredicted RBP17.02■□□□□ 0.32
CSNK1D-206ENST00000577578 SPG7Q9UQ90 795 aa17.01■□□□□ 0.31
CSNK1D-206ENST00000577578 NPC1L1Q9UHC9 1359 aa17.01■□□□□ 0.31
CSNK1D-206ENST00000577578 AKT1S1Q96B36 256 aa17■□□□□ 0.31
CSNK1D-206ENST00000577578 TUBGCP6Q96RT7 1819 aa17■□□□□ 0.31
CSNK1D-206ENST00000577578 ZNF827Q17R98 1081 aa16.99■□□□□ 0.31
CSNK1D-206ENST00000577578 TAF1LQ8IZX4 1826 aa16.98■□□□□ 0.31
CSNK1D-206ENST00000577578 KDRP35968 1356 aa16.98■□□□□ 0.31
CSNK1D-206ENST00000577578 COL24A1Q17RW2 1714 aa16.98■□□□□ 0.31
CSNK1D-206ENST00000577578 PHKG2P15735 406 aa16.97■□□□□ 0.31
CSNK1D-206ENST00000577578 PTGER2P43116 358 aa16.97■□□□□ 0.31
CSNK1D-206ENST00000577578 C5P01031 1676 aa16.97■□□□□ 0.31
CSNK1D-206ENST00000577578 IFNL2Q8IZJ0 200 aa16.96■□□□□ 0.31
CSNK1D-206ENST00000577578 ZBTB7AO95365 584 aa16.95■□□□□ 0.3
CSNK1D-206ENST00000577578 IL13P35225 146 aa16.95■□□□□ 0.3
CSNK1D-206ENST00000577578 MPRIPQ6WCQ1 1025 aa16.95■□□□□ 0.3
CSNK1D-206ENST00000577578 SGIP1Q9BQI5 828 aa16.95■□□□□ 0.3
CSNK1D-206ENST00000577578 MTFR1LQ9H019 292 aa16.95■□□□□ 0.3
CSNK1D-206ENST00000577578 CCNL1Q9UK58 526 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-206ENST00000577578 PALLDQ8WX93 1383 aa16.94■□□□□ 0.3
CSNK1D-206ENST00000577578 KCNQ4P56696 695 aa16.94■□□□□ 0.3
CSNK1D-206ENST00000577578 MTHFSP49914 203 aa16.93■□□□□ 0.3
CSNK1D-206ENST00000577578 AEBP1Q8IUX7 1158 aa16.93■□□□□ 0.3
CSNK1D-206ENST00000577578 PIGBQ92521 554 aa16.93■□□□□ 0.3
CSNK1D-206ENST00000577578 PNPLA7Q6ZV29 1317 aa16.93■□□□□ 0.3
CSNK1D-206ENST00000577578 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-206ENST00000577578 AMOTQ4VCS5 1084 aa16.92■□□□□ 0.3
CSNK1D-206ENST00000577578 CC2D1BQ5T0F9 858 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-206ENST00000577578 SLC16A10Q8TF71 515 aa16.92■□□□□ 0.3
CSNK1D-206ENST00000577578 SMARCC1Q92922 1105 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-206ENST00000577578 PLEKHO1Q53GL0 409 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-206ENST00000577578 PPP1R1BQ9UD71 204 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-206ENST00000577578 ATF5Q9Y2D1 282 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-206ENST00000577578 SULT6B1Q6IMI4 303 aa16.9■□□□□ 0.3
CSNK1D-206ENST00000577578 COL3A1P02461 1466 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-206ENST00000577578 ZNF831Q5JPB2 1677 aa16.9■□□□□ 0.3
CSNK1D-206ENST00000577578 C4BP0C0L5 1744 aa16.9■□□□□ 0.3
CSNK1D-206ENST00000577578 KDM6AO15550 1401 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-206ENST00000577578 ERVV-2B6SEH9 535 aa16.89■□□□□ 0.29
CSNK1D-206ENST00000577578 HSP90AB1P08238 724 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-206ENST00000577578 DCAF5Q96JK2 942 aa16.89■□□□□ 0.29
CSNK1D-206ENST00000577578 TMOD3Q9NYL9 352 aa16.89■□□□□ 0.29
CSNK1D-206ENST00000577578 TFCP2L1Q9NZI6 479 aa16.89■□□□□ 0.29
CSNK1D-206ENST00000577578 UBR3Q6ZT12 1888 aa16.88■□□□□ 0.29
CSNK1D-206ENST00000577578 SCN11AQ9UI33 1791 aa16.88■□□□□ 0.29
CSNK1D-206ENST00000577578 ZNF530Q6P9A1 599 aaPredicted RBP16.87■□□□□ 0.29
CSNK1D-206ENST00000577578 MAP3K5Q99683 1374 aa16.87■□□□□ 0.29
CSNK1D-206ENST00000577578 LOC102724428A0A0B4J2F2 783 aa16.86■□□□□ 0.29
CSNK1D-206ENST00000577578 SIK1P57059 783 aa16.86■□□□□ 0.29
CSNK1D-206ENST00000577578 ASAP1Q9ULH1 1129 aa16.86■□□□□ 0.29
CSNK1D-206ENST00000577578 UTRNP46939 3433 aa16.86■□□□□ 0.29
CSNK1D-206ENST00000577578 VIRMAQ69YN4 1812 aaKnown RBP16.86■□□□□ 0.29
CSNK1D-206ENST00000577578 DIAPH1O60610 1272 aaKnown RBP16.85■□□□□ 0.29
CSNK1D-206ENST00000577578 ATG3Q9NT62 314 aa16.85■□□□□ 0.29
CSNK1D-206ENST00000577578 ADAMTS7Q9UKP4 1686 aa16.85■□□□□ 0.29
CSNK1D-206ENST00000577578 COL23A1Q86Y22 540 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-206ENST00000577578 ARXQ96QS3 562 aa16.84■□□□□ 0.29
CSNK1D-206ENST00000577578 COL5A3P25940 1745 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-206ENST00000577578 C1orf141Q5JVX7 400 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms