RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
SNRPN-208ENST00000577565 L3MBTL2Q969R5 705 aa16.77■□□□□ 0.28
SNRPN-208ENST00000577565 SYTL4Q96C24 671 aaPredicted RBP16.76■□□□□ 0.27
SNRPN-208ENST00000577565 GPBP1L1Q9HC44 474 aaPredicted RBP16.76■□□□□ 0.27
SNRPN-208ENST00000577565 CCNL1Q9UK58 526 aaPredicted RBP16.75■□□□□ 0.27
SNRPN-208ENST00000577565 MEGF6O75095 1541 aa16.75■□□□□ 0.27
SNRPN-208ENST00000577565 ZNF526Q8TF50 670 aaPredicted RBP16.74■□□□□ 0.27
SNRPN-208ENST00000577565 IP6K1Q92551 441 aa16.73■□□□□ 0.27
SNRPN-208ENST00000577565 RGPD2P0DJD1 1756 aa16.73■□□□□ 0.27
SNRPN-208ENST00000577565 ROCK2O75116 1388 aaKnown RBP16.73■□□□□ 0.27
SNRPN-208ENST00000577565 C5P01031 1676 aa16.72■□□□□ 0.27
SNRPN-208ENST00000577565 MSH5O43196 834 aa16.72■□□□□ 0.27
SNRPN-208ENST00000577565 LTV1Q96GA3 475 aaPredicted RBP16.72■□□□□ 0.27
SNRPN-208ENST00000577565 CD2APQ9Y5K6 639 aa16.72■□□□□ 0.27
SNRPN-208ENST00000577565 EDC4Q6P2E9 1401 aaKnown RBP16.71■□□□□ 0.27
SNRPN-208ENST00000577565 TOGARAM1Q9Y4F4 1720 aa16.7■□□□□ 0.26
SNRPN-208ENST00000577565 KIF3CO14782 793 aa16.7■□□□□ 0.26
SNRPN-208ENST00000577565 AMIGO3Q86WK7 504 aa16.7■□□□□ 0.26
SNRPN-208ENST00000577565 A0A1W2PP64 1363 aa16.69■□□□□ 0.26
SNRPN-208ENST00000577565 SLC12A5Q9H2X9 1139 aa16.69■□□□□ 0.26
SNRPN-208ENST00000577565 TAF1LQ8IZX4 1826 aa16.68■□□□□ 0.26
SNRPN-208ENST00000577565 USP47Q96K76 1375 aa16.68■□□□□ 0.26
SNRPN-208ENST00000577565 FBLN1P23142 703 aa16.68■□□□□ 0.26
SNRPN-208ENST00000577565 ZCRB1Q8TBF4 217 aaKnown RBP16.68■□□□□ 0.26
SNRPN-208ENST00000577565 WWC3Q9ULE0 1092 aa16.68■□□□□ 0.26
SNRPN-208ENST00000577565 MAP3K19Q56UN5 1328 aa16.68■□□□□ 0.26
SNRPN-208ENST00000577565 HOXC9P31274 260 aa16.66■□□□□ 0.26
SNRPN-208ENST00000577565 SMIM5Q71RC9 77 aa16.66■□□□□ 0.26
SNRPN-208ENST00000577565 IGSF1Q8N6C5 1336 aa16.66■□□□□ 0.26
SNRPN-208ENST00000577565 TMC1Q8TDI8 760 aa16.65■□□□□ 0.26
SNRPN-208ENST00000577565 SIN3AQ96ST3 1273 aa16.65■□□□□ 0.26
SNRPN-208ENST00000577565 CICQ96RK0 1608 aaPredicted RBP16.65■□□□□ 0.26
SNRPN-208ENST00000577565 C4BP0C0L5 1744 aa16.65■□□□□ 0.26
SNRPN-208ENST00000577565 HDGFL2Q7Z4V5 671 aaPredicted RBP16.64■□□□□ 0.25
SNRPN-208ENST00000577565 PALLDQ8WX93 1383 aa16.64■□□□□ 0.25
SNRPN-208ENST00000577565 DNAJC5GQ8N7S2 189 aa16.63■□□□□ 0.25
SNRPN-208ENST00000577565 UBR3Q6ZT12 1888 aa16.63■□□□□ 0.25
SNRPN-208ENST00000577565 NBPF6Q5VWK0 638 aa16.62■□□□□ 0.25
SNRPN-208ENST00000577565 USHBP1Q8N6Y0 703 aa16.62■□□□□ 0.25
SNRPN-208ENST00000577565 NBPF4Q96M43 638 aa16.62■□□□□ 0.25
SNRPN-208ENST00000577565 KIAA1551Q9HCM1 1747 aa16.6■□□□□ 0.25
SNRPN-208ENST00000577565 FLAD1Q8NFF5 587 aa16.6■□□□□ 0.25
SNRPN-208ENST00000577565 TERF2IPQ9NYB0 399 aa16.59■□□□□ 0.25
SNRPN-208ENST00000577565 PHF14O94880 888 aa16.58■□□□□ 0.24
SNRPN-208ENST00000577565 AMPHP49418 695 aa16.58■□□□□ 0.24
SNRPN-208ENST00000577565 APLP1P51693 650 aa16.58■□□□□ 0.24
SNRPN-208ENST00000577565 MAP2P11137 1827 aaKnown RBP16.58■□□□□ 0.24
SNRPN-208ENST00000577565 ITGB4P16144 1822 aa16.57■□□□□ 0.24
SNRPN-208ENST00000577565 RTL1A6NKG5 1358 aa16.57■□□□□ 0.24
SNRPN-208ENST00000577565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.57■□□□□ 0.24
SNRPN-208ENST00000577565 RRS1Q15050 365 aaKnown RBP16.57■□□□□ 0.24
SNRPN-208ENST00000577565 PXDNLA1KZ92 1463 aa16.56■□□□□ 0.24
SNRPN-208ENST00000577565 CGNL1Q0VF96 1302 aa16.56■□□□□ 0.24
SNRPN-208ENST00000577565 CYP27B1O15528 508 aa16.56■□□□□ 0.24
SNRPN-208ENST00000577565 MPRIPQ6WCQ1 1025 aa16.56■□□□□ 0.24
SNRPN-208ENST00000577565 COG3Q96JB2 828 aa16.56■□□□□ 0.24
SNRPN-208ENST00000577565 AK7Q96M32 723 aa16.55■□□□□ 0.24
SNRPN-208ENST00000577565 WDR90Q96KV7 1748 aa16.55■□□□□ 0.24
SNRPN-208ENST00000577565 KIF13BQ9NQT8 1826 aa16.54■□□□□ 0.24
SNRPN-208ENST00000577565 PCDH11XQ9BZA7 1347 aa16.54■□□□□ 0.24
SNRPN-208ENST00000577565 PCDH11YQ9BZA8 1340 aa16.54■□□□□ 0.24
SNRPN-208ENST00000577565 TOMM70O94826 608 aa16.54■□□□□ 0.24
SNRPN-208ENST00000577565 NEUROD1Q13562 356 aa16.54■□□□□ 0.24
SNRPN-208ENST00000577565 LINC00116Q8NCU8 138 aa16.54■□□□□ 0.24
SNRPN-208ENST00000577565 RAPGEF4Q8WZA2 1011 aa16.54■□□□□ 0.24
SNRPN-208ENST00000577565 CARD11Q9BXL7 1154 aa16.54■□□□□ 0.24
SNRPN-208ENST00000577565 NMRK2Q9NPI5 230 aa16.54■□□□□ 0.24
SNRPN-208ENST00000577565 PUS7Q96PZ0 661 aaKnown RBP16.53■□□□□ 0.24
SNRPN-208ENST00000577565 N4BP2Q86UW6 1770 aaPredicted RBP16.53■□□□□ 0.24
SNRPN-208ENST00000577565 PKD1L3Q7Z443 1732 aa16.53■□□□□ 0.24
SNRPN-208ENST00000577565 TATP17735 454 aaPredicted RBP16.52■□□□□ 0.24
SNRPN-208ENST00000577565 SSFA2P28290 1259 aa16.52■□□□□ 0.24
SNRPN-208ENST00000577565 HTRA3P83110 453 aa16.52■□□□□ 0.24
SNRPN-208ENST00000577565 COL13A1Q5TAT6 717 aaPredicted RBP16.52■□□□□ 0.24
SNRPN-208ENST00000577565 PIGBQ92521 554 aa16.52■□□□□ 0.24
SNRPN-208ENST00000577565 NSD3Q9BZ95 1437 aa16.51■□□□□ 0.23
SNRPN-208ENST00000577565 ITPK1Q13572 414 aa16.5■□□□□ 0.23
SNRPN-208ENST00000577565 HSP90AB2PQ58FF8 381 aa16.5■□□□□ 0.23
SNRPN-208ENST00000577565 SMARCC1Q92922 1105 aaPredicted RBP16.5■□□□□ 0.23
SNRPN-208ENST00000577565 TESK2Q96S53 571 aa16.5■□□□□ 0.23
SNRPN-208ENST00000577565 LOC102724428A0A0B4J2F2 783 aa16.49■□□□□ 0.23
SNRPN-208ENST00000577565 MMP10P09238 476 aa16.49■□□□□ 0.23
SNRPN-208ENST00000577565 SIK1P57059 783 aa16.49■□□□□ 0.23
SNRPN-208ENST00000577565 C10orf71Q711Q0 1435 aa16.49■□□□□ 0.23
SNRPN-208ENST00000577565 SMG6Q86US8 1419 aaKnown RBP16.49■□□□□ 0.23
SNRPN-208ENST00000577565 INSRP06213 1382 aa16.49■□□□□ 0.23
SNRPN-208ENST00000577565 NCAPD2Q15021 1401 aa16.48■□□□□ 0.23
SNRPN-208ENST00000577565 FYB1O15117 783 aa16.48■□□□□ 0.23
SNRPN-208ENST00000577565 JMYQ8N9B5 988 aa16.48■□□□□ 0.23
SNRPN-208ENST00000577565 GGNBP2Q9H3C7 697 aa16.48■□□□□ 0.23
SNRPN-208ENST00000577565 BRCA1P38398 1863 aaKnown RBP16.48■□□□□ 0.23
SNRPN-208ENST00000577565 A0A0G2JLW4 131 aa16.47■□□□□ 0.23
SNRPN-208ENST00000577565 GNPATO15228 680 aa16.47■□□□□ 0.23
SNRPN-208ENST00000577565 HMGB2P26583 209 aaKnown RBP16.47■□□□□ 0.23
SNRPN-208ENST00000577565 KLRG1Q96E93 195 aa16.47■□□□□ 0.23
SNRPN-208ENST00000577565 BCS1LQ9Y276 419 aa16.47■□□□□ 0.23
SNRPN-208ENST00000577565 NKX1-1Q15270 411 aaPredicted RBP16.46■□□□□ 0.23
SNRPN-208ENST00000577565 CAPN15O75808 1086 aa16.45■□□□□ 0.22
SNRPN-208ENST00000577565 RBM46Q8TBY0 533 aaKnown RBP16.45■□□□□ 0.22
SNRPN-208ENST00000577565 ASAP1Q9ULH1 1129 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms