RNA–Protein interactions for RNA: ENST00000576553.1

POLR2A-206, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-206ENST00000576553 ACSBG1Q96GR2 724 aa28.39■■■□□ 2.14
POLR2A-206ENST00000576553 NHSQ6T4R5 1651 aa28.38■■■□□ 2.13
POLR2A-206ENST00000576553 PER1O15534 1290 aaPredicted RBP28.37■■■□□ 2.13
POLR2A-206ENST00000576553 KCNQ2O43526 872 aa28.37■■■□□ 2.13
POLR2A-206ENST00000576553 NBPF14Q5TI25 921 aa28.37■■■□□ 2.13
POLR2A-206ENST00000576553 NCAPD2Q15021 1401 aa28.35■■■□□ 2.13
POLR2A-206ENST00000576553 PSDA5PKW4 1024 aaPredicted RBP28.35■■■□□ 2.13
POLR2A-206ENST00000576553 EIF4A2Q14240 407 aaKnown RBP28.35■■■□□ 2.13
POLR2A-206ENST00000576553 EYA1Q99502 592 aa28.35■■■□□ 2.13
POLR2A-206ENST00000576553 NUP188Q5SRE5 1749 aa28.34■■■□□ 2.13
POLR2A-206ENST00000576553 R3HDM1Q15032 1099 aaKnown RBP28.33■■■□□ 2.13
POLR2A-206ENST00000576553 PCDH11XQ9BZA7 1347 aa28.33■■■□□ 2.13
POLR2A-206ENST00000576553 PCDH11YQ9BZA8 1340 aa28.33■■■□□ 2.13
POLR2A-206ENST00000576553 SHANK3Q9BYB0 1731 aa28.32■■■□□ 2.12
POLR2A-206ENST00000576553 KAT6BQ8WYB5 2073 aa28.31■■■□□ 2.12
POLR2A-206ENST00000576553 NPC1L1Q9UHC9 1359 aa28.3■■■□□ 2.12
POLR2A-206ENST00000576553 CC2D1BQ5T0F9 858 aaKnown RBP28.3■■■□□ 2.12
POLR2A-206ENST00000576553 TXNRD1Q16881 649 aa28.28■■■□□ 2.12
POLR2A-206ENST00000576553 SYTL4Q96C24 671 aaPredicted RBP28.28■■■□□ 2.12
POLR2A-206ENST00000576553 SPG7Q9UQ90 795 aa28.28■■■□□ 2.12
POLR2A-206ENST00000576553 IGSF1Q8N6C5 1336 aa28.26■■■□□ 2.11
POLR2A-206ENST00000576553 PRIM1P49642 420 aaKnown RBP28.26■■■□□ 2.11
POLR2A-206ENST00000576553 PROM2Q8N271 834 aa28.26■■■□□ 2.11
POLR2A-206ENST00000576553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.26■■■□□ 2.11
POLR2A-206ENST00000576553 BTAF1O14981 1849 aa28.26■■■□□ 2.11
POLR2A-206ENST00000576553 PLEKHG2Q9H7P9 1386 aa28.25■■■□□ 2.11
POLR2A-206ENST00000576553 PKD1L3Q7Z443 1732 aa28.24■■■□□ 2.11
POLR2A-206ENST00000576553 DOT1LQ8TEK3 1739 aa28.24■■■□□ 2.11
POLR2A-206ENST00000576553 CYP27B1O15528 508 aa28.22■■■□□ 2.11
POLR2A-206ENST00000576553 MTHFSP49914 203 aa28.22■■■□□ 2.11
POLR2A-206ENST00000576553 CNGB1Q14028 1251 aaPredicted RBP28.18■■■□□ 2.1
POLR2A-206ENST00000576553 STK32BQ9NY57 414 aa28.18■■■□□ 2.1
POLR2A-206ENST00000576553 IL13P35225 146 aa28.17■■■□□ 2.1
POLR2A-206ENST00000576553 ANO8Q9HCE9 1232 aaPredicted RBP28.17■■■□□ 2.1
POLR2A-206ENST00000576553 LRP5O75197 1615 aa28.17■■■□□ 2.1
POLR2A-206ENST00000576553 NKX1-1Q15270 411 aaPredicted RBP28.16■■■□□ 2.1
POLR2A-206ENST00000576553 SLC27A3Q5K4L6 730 aa28.16■■■□□ 2.1
POLR2A-206ENST00000576553 IFNL2Q8IZJ0 200 aa28.16■■■□□ 2.1
POLR2A-206ENST00000576553 PLEKHO1Q53GL0 409 aaPredicted RBP28.15■■■□□ 2.1
POLR2A-206ENST00000576553 PHKG2P15735 406 aa28.13■■■□□ 2.09
POLR2A-206ENST00000576553 AMOTQ4VCS5 1084 aa28.13■■■□□ 2.09
POLR2A-206ENST00000576553 SULT6B1Q6IMI4 303 aa28.13■■■□□ 2.09
POLR2A-206ENST00000576553 SLC15A2Q16348 729 aa28.12■■■□□ 2.09
POLR2A-206ENST00000576553 KDRP35968 1356 aa28.11■■■□□ 2.09
POLR2A-206ENST00000576553 DIAPH1O60610 1272 aaKnown RBP28.11■■■□□ 2.09
POLR2A-206ENST00000576553 MPRIPQ6WCQ1 1025 aa28.11■■■□□ 2.09
POLR2A-206ENST00000576553 AEBP1Q8IUX7 1158 aa28.11■■■□□ 2.09
POLR2A-206ENST00000576553 HSP90AB1P08238 724 aaKnown RBP28.09■■■□□ 2.09
POLR2A-206ENST00000576553 LRRC4BQ9NT99 713 aa28.09■■■□□ 2.09
POLR2A-206ENST00000576553 TOGARAM1Q9Y4F4 1720 aa28.08■■■□□ 2.09
POLR2A-206ENST00000576553 PAPPAQ13219 1627 aa28.07■■■□□ 2.08
POLR2A-206ENST00000576553 HMGB2P26583 209 aaKnown RBP28.07■■■□□ 2.08
POLR2A-206ENST00000576553 ZNF530Q6P9A1 599 aaPredicted RBP28.07■■■□□ 2.08
POLR2A-206ENST00000576553 SMARCC1Q92922 1105 aaPredicted RBP28.07■■■□□ 2.08
POLR2A-206ENST00000576553 LY75O60449 1722 aa28.06■■■□□ 2.08
POLR2A-206ENST00000576553 CCNL1Q9UK58 526 aaPredicted RBP28.06■■■□□ 2.08
POLR2A-206ENST00000576553 SRCAPQ6ZRS2 3230 aa28.05■■■□□ 2.08
POLR2A-206ENST00000576553 C1orf141Q5JVX7 400 aa28.05■■■□□ 2.08
POLR2A-206ENST00000576553 CFAP53Q96M91 514 aa28.05■■■□□ 2.08
POLR2A-206ENST00000576553 SPON1Q9HCB6 807 aa28.05■■■□□ 2.08
POLR2A-206ENST00000576553 TMOD3Q9NYL9 352 aa28.05■■■□□ 2.08
POLR2A-206ENST00000576553 ITGB4P16144 1822 aa28.04■■■□□ 2.08
POLR2A-206ENST00000576553 PALLDQ8WX93 1383 aa28.04■■■□□ 2.08
POLR2A-206ENST00000576553 PIGBQ92521 554 aa28.04■■■□□ 2.08
POLR2A-206ENST00000576553 DCAF5Q96JK2 942 aa28.04■■■□□ 2.08
POLR2A-206ENST00000576553 COL3A1P02461 1466 aaPredicted RBP28.02■■■□□ 2.08
POLR2A-206ENST00000576553 CASZ1Q86V15 1759 aa28.01■■■□□ 2.08
POLR2A-206ENST00000576553 ERVV-2B6SEH9 535 aa28.01■■■□□ 2.07
POLR2A-206ENST00000576553 HMOX1P09601 288 aa28.01■■■□□ 2.07
POLR2A-206ENST00000576553 ZEB1P37275 1124 aaPredicted RBP28.01■■■□□ 2.07
POLR2A-206ENST00000576553 KCNQ4P56696 695 aa28■■■□□ 2.07
POLR2A-206ENST00000576553 ZNF827Q17R98 1081 aa28■■■□□ 2.07
POLR2A-206ENST00000576553 AKT1S1Q96B36 256 aa28■■■□□ 2.07
POLR2A-206ENST00000576553 U2SURPO15042 1029 aaKnown RBP27.99■■■□□ 2.07
POLR2A-206ENST00000576553 PPP2R1AP30153 589 aa27.99■■■□□ 2.07
POLR2A-206ENST00000576553 PDGFDQ9GZP0 370 aaPredicted RBP27.97■■■□□ 2.07
POLR2A-206ENST00000576553 TFCP2L1Q9NZI6 479 aa27.97■■■□□ 2.07
POLR2A-206ENST00000576553 ZBTB7AO95365 584 aa27.95■■■□□ 2.06
POLR2A-206ENST00000576553 NUDCQ9Y266 331 aa27.95■■■□□ 2.06
POLR2A-206ENST00000576553 KDM6AO15550 1401 aaPredicted RBP27.94■■■□□ 2.06
POLR2A-206ENST00000576553 CABP4P57796 275 aa27.94■■■□□ 2.06
POLR2A-206ENST00000576553 AKAP4Q5JQC9 854 aa27.94■■■□□ 2.06
POLR2A-206ENST00000576553 PPP1R1BQ9UD71 204 aaPredicted RBP27.94■■■□□ 2.06
POLR2A-206ENST00000576553 MTFR1LQ9H019 292 aa27.93■■■□□ 2.06
POLR2A-206ENST00000576553 ASAP1Q9ULH1 1129 aa27.93■■■□□ 2.06
POLR2A-206ENST00000576553 QSER1Q2KHR3 1735 aa27.92■■■□□ 2.06
POLR2A-206ENST00000576553 LOC102724428A0A0B4J2F2 783 aa27.91■■■□□ 2.06
POLR2A-206ENST00000576553 SIK1P57059 783 aa27.91■■■□□ 2.06
POLR2A-206ENST00000576553 C5P01031 1676 aa27.91■■■□□ 2.06
POLR2A-206ENST00000576553 SLC16A10Q8TF71 515 aa27.9■■■□□ 2.06
POLR2A-206ENST00000576553 ATG3Q9NT62 314 aa27.9■■■□□ 2.06
POLR2A-206ENST00000576553 ATF5Q9Y2D1 282 aaPredicted RBP27.9■■■□□ 2.06
POLR2A-206ENST00000576553 PNPLA7Q6ZV29 1317 aa27.9■■■□□ 2.06
POLR2A-206ENST00000576553 DDX10Q13206 875 aaKnown RBP27.88■■■□□ 2.05
POLR2A-206ENST00000576553 MTHFSDQ2M296 383 aaKnown RBP27.88■■■□□ 2.05
POLR2A-206ENST00000576553 TAF1LQ8IZX4 1826 aa27.85■■■□□ 2.05
POLR2A-206ENST00000576553 ATP6V1AP38606 617 aa27.85■■■□□ 2.05
POLR2A-206ENST00000576553 PTGER2P43116 358 aa27.85■■■□□ 2.05
POLR2A-206ENST00000576553 NFATC2IPQ8NCF5 419 aa27.85■■■□□ 2.05
POLR2A-206ENST00000576553 FLAD1Q8NFF5 587 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms