RNA–Protein interactions for RNA: ENST00000575796.1

SPNS3-205, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-205ENST00000575796 PTF1AQ7RTS3 328 aa17.22■□□□□ 0.35
SPNS3-205ENST00000575796 TATP17735 454 aaPredicted RBP17.21■□□□□ 0.35
SPNS3-205ENST00000575796 ZCRB1Q8TBF4 217 aaKnown RBP17.21■□□□□ 0.35
SPNS3-205ENST00000575796 DDX54Q8TDD1 881 aaKnown RBP17.21■□□□□ 0.35
SPNS3-205ENST00000575796 DEFB132Q7Z7B7 95 aa17.2■□□□□ 0.34
SPNS3-205ENST00000575796 DIAPH1O60610 1272 aaKnown RBP17.19■□□□□ 0.34
SPNS3-205ENST00000575796 DOT1LQ8TEK3 1739 aa17.18■□□□□ 0.34
SPNS3-205ENST00000575796 NHSQ6T4R5 1651 aa17.18■□□□□ 0.34
SPNS3-205ENST00000575796 HMOX1P09601 288 aa17.18■□□□□ 0.34
SPNS3-205ENST00000575796 SULT6B1Q6IMI4 303 aa17.18■□□□□ 0.34
SPNS3-205ENST00000575796 ACSBG1Q96GR2 724 aa17.18■□□□□ 0.34
SPNS3-205ENST00000575796 KAT6BQ8WYB5 2073 aa17.17■□□□□ 0.34
SPNS3-205ENST00000575796 BCL9O00512 1426 aa17.17■□□□□ 0.34
SPNS3-205ENST00000575796 KCNQ2O43526 872 aa17.17■□□□□ 0.34
SPNS3-205ENST00000575796 KDRP35968 1356 aa17.16■□□□□ 0.34
SPNS3-205ENST00000575796 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
SPNS3-205ENST00000575796 CYP27B1O15528 508 aa17.16■□□□□ 0.34
SPNS3-205ENST00000575796 U2SURPO15042 1029 aaKnown RBP17.15■□□□□ 0.34
SPNS3-205ENST00000575796 CCDC125Q86Z20 511 aa17.15■□□□□ 0.34
SPNS3-205ENST00000575796 EN1Q05925 392 aaPredicted RBP17.14■□□□□ 0.33
SPNS3-205ENST00000575796 SF3B2Q13435 895 aaKnown RBP17.14■□□□□ 0.33
SPNS3-205ENST00000575796 RALBP1Q15311 655 aa17.14■□□□□ 0.33
SPNS3-205ENST00000575796 CFAP53Q96M91 514 aa17.14■□□□□ 0.33
SPNS3-205ENST00000575796 PCDH11XQ9BZA7 1347 aa17.14■□□□□ 0.33
SPNS3-205ENST00000575796 PCDH11YQ9BZA8 1340 aa17.14■□□□□ 0.33
SPNS3-205ENST00000575796 BTAF1O14981 1849 aa17.13■□□□□ 0.33
SPNS3-205ENST00000575796 APBA3O96018 575 aa17.13■□□□□ 0.33
SPNS3-205ENST00000575796 PRKRIP1Q9H875 184 aaPredicted RBP17.12■□□□□ 0.33
SPNS3-205ENST00000575796 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
SPNS3-205ENST00000575796 BAG6P46379 1132 aa17.11■□□□□ 0.33
SPNS3-205ENST00000575796 BCL11BQ9C0K0 894 aaPredicted RBP17.11■□□□□ 0.33
SPNS3-205ENST00000575796 MYBBP1AQ9BQG0 1328 aaKnown RBP17.11■□□□□ 0.33
SPNS3-205ENST00000575796 PRIM1P49642 420 aaKnown RBP17.1■□□□□ 0.33
SPNS3-205ENST00000575796 EZH2Q15910 746 aaKnown RBP17.1■□□□□ 0.33
SPNS3-205ENST00000575796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.1■□□□□ 0.33
SPNS3-205ENST00000575796 ITGB4P16144 1822 aa17.1■□□□□ 0.33
SPNS3-205ENST00000575796 PHKG2P15735 406 aa17.09■□□□□ 0.33
SPNS3-205ENST00000575796 ZNF530Q6P9A1 599 aaPredicted RBP17.09■□□□□ 0.33
SPNS3-205ENST00000575796 SYTL4Q96C24 671 aaPredicted RBP17.09■□□□□ 0.33
SPNS3-205ENST00000575796 RREB1Q92766 1687 aa17.09■□□□□ 0.33
SPNS3-205ENST00000575796 U2AF1L5P0DN76 240 aaPredicted RBP17.08■□□□□ 0.32
SPNS3-205ENST00000575796 U2AF1Q01081 240 aaKnown RBP eCLIP17.08■□□□□ 0.32
SPNS3-205ENST00000575796 PLEKHO1Q53GL0 409 aaPredicted RBP17.08■□□□□ 0.32
SPNS3-205ENST00000575796 CAMKK2Q96RR4 588 aa17.08■□□□□ 0.32
SPNS3-205ENST00000575796 NUP188Q5SRE5 1749 aa17.07■□□□□ 0.32
SPNS3-205ENST00000575796 KDM6AO15550 1401 aaPredicted RBP17.07■□□□□ 0.32
SPNS3-205ENST00000575796 PLEKHG2Q9H7P9 1386 aa17.07■□□□□ 0.32
SPNS3-205ENST00000575796 RSPH6AQ9H0K4 717 aa17.07■□□□□ 0.32
SPNS3-205ENST00000575796 NKX1-1Q15270 411 aaPredicted RBP17.06■□□□□ 0.32
SPNS3-205ENST00000575796 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
SPNS3-205ENST00000575796 RGPD3A6NKT7 1758 aaPredicted RBP17.06■□□□□ 0.32
SPNS3-205ENST00000575796 RGPD4Q7Z3J3 1758 aa17.06■□□□□ 0.32
SPNS3-205ENST00000575796 PRKAR2BP31323 418 aa17.05■□□□□ 0.32
SPNS3-205ENST00000575796 MTHFSDQ2M296 383 aaKnown RBP17.05■□□□□ 0.32
SPNS3-205ENST00000575796 AMOTQ4VCS5 1084 aa17.05■□□□□ 0.32
SPNS3-205ENST00000575796 NUDCQ9Y266 331 aa17.05■□□□□ 0.32
SPNS3-205ENST00000575796 VIRMAQ69YN4 1812 aaKnown RBP17.05■□□□□ 0.32
SPNS3-205ENST00000575796 PHACTR3Q96KR7 559 aa17.04■□□□□ 0.32
SPNS3-205ENST00000575796 CCDC184Q52MB2 194 aa17.03■□□□□ 0.32
SPNS3-205ENST00000575796 MPRIPQ6WCQ1 1025 aa17.03■□□□□ 0.32
SPNS3-205ENST00000575796 PROM2Q8N271 834 aa17.03■□□□□ 0.32
SPNS3-205ENST00000575796 SCN11AQ9UI33 1791 aa17.02■□□□□ 0.32
SPNS3-205ENST00000575796 PLSCR1O15162 318 aa17.01■□□□□ 0.31
SPNS3-205ENST00000575796 C1orf141Q5JVX7 400 aa17.01■□□□□ 0.31
SPNS3-205ENST00000575796 LY75O60449 1722 aa17.01■□□□□ 0.31
SPNS3-205ENST00000575796 KCNQ4P56696 695 aa17■□□□□ 0.31
SPNS3-205ENST00000575796 TXNRD1Q16881 649 aa17■□□□□ 0.31
SPNS3-205ENST00000575796 PIGBQ92521 554 aa17■□□□□ 0.31
SPNS3-205ENST00000575796 ADAMTS7Q9UKP4 1686 aa17■□□□□ 0.31
SPNS3-205ENST00000575796 FCHSD2O94868 740 aa16.99■□□□□ 0.31
SPNS3-205ENST00000575796 AKAP4Q5JQC9 854 aa16.99■□□□□ 0.31
SPNS3-205ENST00000575796 DCAF5Q96JK2 942 aa16.99■□□□□ 0.31
SPNS3-205ENST00000575796 LGR6Q9HBX8 967 aa16.99■□□□□ 0.31
SPNS3-205ENST00000575796 ANP32CO43423 234 aa16.98■□□□□ 0.31
SPNS3-205ENST00000575796 TMOD3Q9NYL9 352 aa16.98■□□□□ 0.31
SPNS3-205ENST00000575796 PAPPAQ13219 1627 aa16.97■□□□□ 0.31
SPNS3-205ENST00000575796 HSP90AB1P08238 724 aaKnown RBP16.97■□□□□ 0.31
SPNS3-205ENST00000575796 PLEKHF1Q96S99 279 aa16.97■□□□□ 0.31
SPNS3-205ENST00000575796 ANO8Q9HCE9 1232 aaPredicted RBP16.97■□□□□ 0.31
SPNS3-205ENST00000575796 LRRC4BQ9NT99 713 aa16.97■□□□□ 0.31
SPNS3-205ENST00000575796 MAP3K5Q99683 1374 aa16.97■□□□□ 0.31
SPNS3-205ENST00000575796 DLG5Q8TDM6 1919 aa16.96■□□□□ 0.31
SPNS3-205ENST00000575796 PSDA5PKW4 1024 aaPredicted RBP16.96■□□□□ 0.31
SPNS3-205ENST00000575796 RNMTO43148 476 aaKnown RBP16.96■□□□□ 0.31
SPNS3-205ENST00000575796 GAS2L2Q8NHY3 880 aa16.96■□□□□ 0.31
SPNS3-205ENST00000575796 ASAP1Q9ULH1 1129 aa16.96■□□□□ 0.31
SPNS3-205ENST00000575796 PALLDQ8WX93 1383 aa16.96■□□□□ 0.31
SPNS3-205ENST00000575796 MRC1P22897 1456 aa16.95■□□□□ 0.3
SPNS3-205ENST00000575796 ERVV-2B6SEH9 535 aa16.95■□□□□ 0.3
SPNS3-205ENST00000575796 CABP4P57796 275 aa16.95■□□□□ 0.3
SPNS3-205ENST00000575796 CCDC146Q8IYE0 955 aa16.95■□□□□ 0.3
SPNS3-205ENST00000575796 SIPA1L3O60292 1781 aaPredicted RBP16.93■□□□□ 0.3
SPNS3-205ENST00000575796 R3HDM1Q15032 1099 aaKnown RBP16.93■□□□□ 0.3
SPNS3-205ENST00000575796 NFATC2IPQ8NCF5 419 aa16.93■□□□□ 0.3
SPNS3-205ENST00000575796 IL17REQ8NFR9 667 aa16.93■□□□□ 0.3
SPNS3-205ENST00000575796 ATG3Q9NT62 314 aa16.93■□□□□ 0.3
SPNS3-205ENST00000575796 ADAMTS8Q9UP79 889 aa16.93■□□□□ 0.3
SPNS3-205ENST00000575796 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
SPNS3-205ENST00000575796 WDR43Q15061 677 aaKnown RBP eCLIP16.92■□□□□ 0.3
SPNS3-205ENST00000575796 CCNL1Q9UK58 526 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms