RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 CEP57L1Q8IYX8 460 aa12.29□□□□□ -0.44
USP6-206ENST00000575709 TAOK3Q9H2K8 898 aa12.29□□□□□ -0.44
USP6-206ENST00000575709 ZBED9Q6R2W3 1325 aa12.29□□□□□ -0.44
USP6-206ENST00000575709 RASSF4Q9H2L5 321 aa12.29□□□□□ -0.44
USP6-206ENST00000575709 MACROD2A1Z1Q3 448 aa12.29□□□□□ -0.44
USP6-206ENST00000575709 SART3Q15020 963 aaKnown RBP12.29□□□□□ -0.44
USP6-206ENST00000575709 GTPBP4Q9BZE4 634 aaKnown RBP12.29□□□□□ -0.44
USP6-206ENST00000575709 NSRP1Q9H0G5 558 aaKnown RBP12.29□□□□□ -0.44
USP6-206ENST00000575709 CLNS1AP54105 237 aaKnown RBP12.29□□□□□ -0.44
USP6-206ENST00000575709 MORC4Q8TE76 937 aa12.29□□□□□ -0.44
USP6-206ENST00000575709 DZIP1LQ8IYY4 767 aaKnown RBP12.29□□□□□ -0.44
USP6-206ENST00000575709 MCM2P49736 904 aa12.29□□□□□ -0.44
USP6-206ENST00000575709 RAB3IL1Q8TBN0 382 aa12.29□□□□□ -0.44
USP6-206ENST00000575709 KRT85P78386 507 aa12.29□□□□□ -0.44
USP6-206ENST00000575709 TTC16Q8NEE8 873 aa12.28□□□□□ -0.44
USP6-206ENST00000575709 LRCH2Q5VUJ6 765 aa12.28□□□□□ -0.44
USP6-206ENST00000575709 DNAI2Q9GZS0 605 aa12.28□□□□□ -0.44
USP6-206ENST00000575709 PAFAH1B1P43034 410 aa12.28□□□□□ -0.44
USP6-206ENST00000575709 AMPHP49418 695 aa12.28□□□□□ -0.44
USP6-206ENST00000575709 FOXD1Q16676 465 aa12.28□□□□□ -0.44
USP6-206ENST00000575709 RABGAP1Q9Y3P9 1069 aa12.28□□□□□ -0.44
USP6-206ENST00000575709 SSBP05455 408 aaKnown RBP eCLIP12.28□□□□□ -0.44
USP6-206ENST00000575709 CCDC96Q2M329 555 aa12.28□□□□□ -0.44
USP6-206ENST00000575709 DDX27Q96GQ7 796 aaKnown RBP12.28□□□□□ -0.44
USP6-206ENST00000575709 SPATA32Q96LK8 384 aa12.28□□□□□ -0.44
USP6-206ENST00000575709 KANK1Q14678 1352 aa12.28□□□□□ -0.44
USP6-206ENST00000575709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.27□□□□□ -0.44
USP6-206ENST00000575709 BANK1Q8NDB2 785 aa12.27□□□□□ -0.44
USP6-206ENST00000575709 ATRIPQ8WXE1 791 aa12.27□□□□□ -0.44
USP6-206ENST00000575709 TACC1O75410 805 aa12.27□□□□□ -0.44
USP6-206ENST00000575709 CEP128Q6ZU80 1094 aa12.27□□□□□ -0.44
USP6-206ENST00000575709 WDR33Q9C0J8 1336 aaKnown RBP12.27□□□□□ -0.44
USP6-206ENST00000575709 CAPN2P17655 700 aa12.27□□□□□ -0.45
USP6-206ENST00000575709 SEPT8Q92599 483 aa12.27□□□□□ -0.45
USP6-206ENST00000575709 CLIP2Q9UDT6 1046 aa12.27□□□□□ -0.45
USP6-206ENST00000575709 KIF15Q9NS87 1388 aa12.27□□□□□ -0.45
USP6-206ENST00000575709 ZBTB9Q96C00 473 aa12.27□□□□□ -0.45
USP6-206ENST00000575709 NEUROD6Q96NK8 337 aa12.27□□□□□ -0.45
USP6-206ENST00000575709 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.27□□□□□ -0.45
USP6-206ENST00000575709 NAA15Q9BXJ9 866 aaKnown RBP12.27□□□□□ -0.45
USP6-206ENST00000575709 CCDC114Q96M63 670 aa12.27□□□□□ -0.45
USP6-206ENST00000575709 IKBKGQ9Y6K9 419 aa12.27□□□□□ -0.45
USP6-206ENST00000575709 A0A1B0GUL7 405 aa12.26□□□□□ -0.45
USP6-206ENST00000575709 FAM160A1Q05DH4 1040 aa12.26□□□□□ -0.45
USP6-206ENST00000575709 PRR16Q569H4 304 aa12.26□□□□□ -0.45
USP6-206ENST00000575709 ZBTB12Q9Y330 459 aaPredicted RBP12.26□□□□□ -0.45
USP6-206ENST00000575709 USO1O60763 962 aaKnown RBP12.26□□□□□ -0.45
USP6-206ENST00000575709 POTEJP0CG39 1038 aa12.26□□□□□ -0.45
USP6-206ENST00000575709 TSPYL2Q9H2G4 693 aaPredicted RBP12.26□□□□□ -0.45
USP6-206ENST00000575709 MAP3K11Q16584 847 aa12.26□□□□□ -0.45
USP6-206ENST00000575709 PPP1R12CQ9BZL4 782 aa12.26□□□□□ -0.45
USP6-206ENST00000575709 MYBBP1AQ9BQG0 1328 aaKnown RBP12.26□□□□□ -0.45
USP6-206ENST00000575709 PCK1P35558 622 aa12.25□□□□□ -0.45
USP6-206ENST00000575709 CEP135Q66GS9 1140 aa12.25□□□□□ -0.45
USP6-206ENST00000575709 SMC6Q96SB8 1091 aa12.25□□□□□ -0.45
USP6-206ENST00000575709 ZSWIM4Q9H7M6 989 aa12.25□□□□□ -0.45
USP6-206ENST00000575709 CCDC170Q8IYT3 715 aa12.25□□□□□ -0.45
USP6-206ENST00000575709 MCM6Q14566 821 aa12.25□□□□□ -0.45
USP6-206ENST00000575709 MAP7D1Q3KQU3 841 aa12.25□□□□□ -0.45
USP6-206ENST00000575709 BUB1BO60566 1050 aaPredicted RBP12.25□□□□□ -0.45
USP6-206ENST00000575709 TSNARE1Q96NA8 513 aa12.25□□□□□ -0.45
USP6-206ENST00000575709 DNAJC21Q5F1R6 531 aaKnown RBP12.24□□□□□ -0.45
USP6-206ENST00000575709 CTAGE6Q86UF2 777 aa12.24□□□□□ -0.45
USP6-206ENST00000575709 LUC7L2Q9Y383 392 aaKnown RBP12.24□□□□□ -0.45
USP6-206ENST00000575709 K7ELQ4 463 aaPredicted RBP12.24□□□□□ -0.45
USP6-206ENST00000575709 CTNNA2P26232 953 aa12.24□□□□□ -0.45
USP6-206ENST00000575709 ZBTB16Q05516 673 aa12.24□□□□□ -0.45
USP6-206ENST00000575709 IGSF3O75054 1194 aa12.24□□□□□ -0.45
USP6-206ENST00000575709 PRPF31Q8WWY3 499 aaKnown RBP12.24□□□□□ -0.45
USP6-206ENST00000575709 NUP88Q99567 741 aaPredicted RBP12.24□□□□□ -0.45
USP6-206ENST00000575709 TOP1P11387 765 aaKnown RBP12.24□□□□□ -0.45
USP6-206ENST00000575709 STIM2Q9P246 746 aa12.24□□□□□ -0.45
USP6-206ENST00000575709 PRPF4BQ13523 1007 aaKnown RBP12.24□□□□□ -0.45
USP6-206ENST00000575709 KRBA2Q6ZNG9 492 aa12.24□□□□□ -0.45
USP6-206ENST00000575709 FSD1Q9BTV5 496 aa12.24□□□□□ -0.45
USP6-206ENST00000575709 ATP11AP98196 1134 aa12.24□□□□□ -0.45
USP6-206ENST00000575709 LRRC43Q8N309 656 aa12.24□□□□□ -0.45
USP6-206ENST00000575709 MKRN1Q9UHC7 482 aaKnown RBP12.24□□□□□ -0.45
USP6-206ENST00000575709 EBAG9O00559 213 aa12.23□□□□□ -0.45
USP6-206ENST00000575709 SETDB1Q15047 1291 aa12.23□□□□□ -0.45
USP6-206ENST00000575709 C1orf141Q5JVX7 400 aa12.23□□□□□ -0.45
USP6-206ENST00000575709 LARP1BQ659C4 914 aaKnown RBP12.23□□□□□ -0.45
USP6-206ENST00000575709 CASQ2O14958 399 aaPredicted RBP12.23□□□□□ -0.45
USP6-206ENST00000575709 HDGFP51858 240 aaKnown RBP12.23□□□□□ -0.45
USP6-206ENST00000575709 CACNA2D4Q7Z3S7 1137 aa12.23□□□□□ -0.45
USP6-206ENST00000575709 LCA5Q86VQ0 697 aa12.23□□□□□ -0.45
USP6-206ENST00000575709 CCDC83Q8IWF9 413 aa12.23□□□□□ -0.45
USP6-206ENST00000575709 SNW1Q13573 536 aaKnown RBP12.23□□□□□ -0.45
USP6-206ENST00000575709 WDR63Q8IWG1 891 aa12.23□□□□□ -0.45
USP6-206ENST00000575709 CCDC155Q8N6L0 562 aa12.23□□□□□ -0.45
USP6-206ENST00000575709 MCM4P33991 863 aa12.23□□□□□ -0.45
USP6-206ENST00000575709 SPTY2D1Q68D10 685 aaPredicted RBP12.23□□□□□ -0.45
USP6-206ENST00000575709 SREK1Q8WXA9 508 aaKnown RBP12.23□□□□□ -0.45
USP6-206ENST00000575709 SATB1Q01826 763 aa12.22□□□□□ -0.45
USP6-206ENST00000575709 JADE2Q9NQC1 790 aa12.22□□□□□ -0.45
USP6-206ENST00000575709 EPSTI1Q96J88 318 aa12.22□□□□□ -0.45
USP6-206ENST00000575709 VPS18Q9P253 973 aa12.22□□□□□ -0.45
USP6-206ENST00000575709 TERF2IPQ9NYB0 399 aa12.22□□□□□ -0.45
USP6-206ENST00000575709 BICDL2A1A5D9 508 aa12.22□□□□□ -0.45
USP6-206ENST00000575709 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms