RNA–Protein interactions for RNA: ENST00000575656.5

ARHGAP17-218, Transcript of Rho GTPase activating protein 17, human

TSL 3

Gene ARHGAP17, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP17-218	ENST00000575656	NBPF1	Q3BBV0	1214 aa		13.83	□□□□□ -0.2
ARHGAP17-218	ENST00000575656	PELP1	Q8IZL8	1130 aa	Known RBP	13.83	□□□□□ -0.2
ARHGAP17-218	ENST00000575656	ERBB3	P21860	1342 aa		13.83	□□□□□ -0.2
ARHGAP17-218	ENST00000575656	USP54	Q70EL1	1684 aa		13.82	□□□□□ -0.2
ARHGAP17-218	ENST00000575656	LY75	O60449	1722 aa		13.81	□□□□□ -0.2
ARHGAP17-218	ENST00000575656	IL2RB	P14784	551 aa		13.81	□□□□□ -0.2
ARHGAP17-218	ENST00000575656	KLHL34	Q8N239	644 aa		13.81	□□□□□ -0.2
ARHGAP17-218	ENST00000575656	TTC21A	Q8NDW8	1320 aa		13.81	□□□□□ -0.2
ARHGAP17-218	ENST00000575656	ZNF692	Q9BU19	519 aa	Predicted RBP	13.8	□□□□□ -0.2
ARHGAP17-218	ENST00000575656	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.8	□□□□□ -0.2
ARHGAP17-218	ENST00000575656	NSD2	O96028	1365 aa		13.79	□□□□□ -0.2
ARHGAP17-218	ENST00000575656	USP31	Q70CQ4	1352 aa		13.79	□□□□□ -0.2
ARHGAP17-218	ENST00000575656	TFCP2L1	Q9NZI6	479 aa		13.78	□□□□□ -0.2
ARHGAP17-218	ENST00000575656	SOX12	O15370	315 aa		13.76	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	DNAJC5G	Q8N7S2	189 aa		13.76	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	CD2AP	Q9Y5K6	639 aa		13.76	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	MON2	Q7Z3U7	1717 aa		13.76	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	ANKRD36B	Q8N2N9	1353 aa		13.75	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	KIF3C	O14782	793 aa		13.75	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	KCNQ4	P56696	695 aa		13.75	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	CHRDL2	Q6WN34	429 aa		13.75	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	COL23A1	Q86Y22	540 aa	Predicted RBP	13.75	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	NLRP2	Q9NX02	1062 aa		13.75	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	LTN1	O94822	1766 aa		13.74	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	EVC2	Q86UK5	1308 aa		13.74	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	DOT1L	Q8TEK3	1739 aa		13.73	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	CIC	Q96RK0	1608 aa	Predicted RBP	13.72	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	ANKRD24	Q8TF21	1146 aa		13.72	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	KTN1	Q86UP2	1357 aa	Known RBP	13.71	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	PRIM1	P49642	420 aa	Known RBP	13.71	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	APLP1	P51693	650 aa		13.71	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	CD163L1	Q9NR16	1453 aa		13.71	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	FAM208A	Q9UK61	1670 aa	Known RBP	13.71	□□□□□ -0.21
ARHGAP17-218	ENST00000575656	SBNO2	Q9Y2G9	1366 aa		13.71	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	SPDYE2B	A6NHP3	402 aa		13.7	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	SPDYE6	P0CI01	402 aa		13.7	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	SPDYE2	Q495Y8	402 aa		13.7	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	ZNF526	Q8TF50	670 aa	Predicted RBP	13.7	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	PCNT	O95613	3336 aa		13.69	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	DDX54	Q8TDD1	881 aa	Known RBP	13.69	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	CCNL1	Q9UK58	526 aa	Predicted RBP	13.69	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	C5	P01031	1676 aa		13.69	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	KAT6B	Q8WYB5	2073 aa		13.68	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	MSL1	Q68DK7	614 aa		13.68	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	REM2	Q8IYK8	340 aa	Predicted RBP	13.68	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	NME9	Q86XW9	330 aa		13.67	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	TOGARAM1	Q9Y4F4	1720 aa		13.67	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	IP6K1	Q92551	441 aa		13.66	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	TAF1L	Q8IZX4	1826 aa		13.66	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	IGSF1	Q8N6C5	1336 aa		13.65	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	TOMM70	O94826	608 aa		13.65	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	JMY	Q8N9B5	988 aa		13.65	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	FLAD1	Q8NFF5	587 aa		13.65	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	SYTL4	Q96C24	671 aa	Predicted RBP	13.65	□□□□□ -0.22
ARHGAP17-218	ENST00000575656	MEGF6	O75095	1541 aa		13.64	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	USP47	Q96K76	1375 aa		13.64	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.64	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.64	□□□□□ -0.23	1e-9	■■■□□ 18.1
ARHGAP17-218	ENST00000575656	WDR90	Q96KV7	1748 aa		13.64	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	AMIGO3	Q86WK7	504 aa		13.63	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	EDC4	Q6P2E9	1401 aa	Known RBP	13.63	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	C4B	P0C0L5	1744 aa		13.62	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	KIAA1551	Q9HCM1	1747 aa		13.62	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	ZCRB1	Q8TBF4	217 aa	Known RBP	13.62	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	UBR3	Q6ZT12	1888 aa		13.61	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	HMGB2	P26583	209 aa	Known RBP	13.61	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	KLRG1	Q96E93	195 aa		13.6	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	RGPD2	P0DJD1	1756 aa		13.6	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	KIF13B	Q9NQT8	1826 aa		13.6	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	PRELP	P51888	382 aa		13.59	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	PALLD	Q8WX93	1383 aa		13.58	□□□□□ -0.23
ARHGAP17-218	ENST00000575656	MKRN4P	Q13434	485 aa	Predicted RBP	13.58	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	RBM46	Q8TBY0	533 aa	Known RBP	13.58	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	PXDNL	A1KZ92	1463 aa		13.58	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	CGNL1	Q0VF96	1302 aa		13.58	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	HOXC9	P31274	260 aa		13.57	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	L3MBTL2	Q969R5	705 aa		13.57	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	NMRK2	Q9NPI5	230 aa		13.57	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	MAP3K19	Q56UN5	1328 aa		13.57	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	MAP2	P11137	1827 aa	Known RBP	13.57	□□□□□ -0.24
ARHGAP17-218	ENST00000575656		A0A1W2PP64	1363 aa		13.57	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	NSD3	Q9BZ95	1437 aa		13.56	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	LTV1	Q96GA3	475 aa	Predicted RBP	13.56	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	WWC3	Q9ULE0	1092 aa		13.56	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.55	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	SSFA2	P28290	1259 aa		13.55	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	SLC12A5	Q9H2X9	1139 aa		13.55	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	ROCK2	O75116	1388 aa	Known RBP	13.55	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	HTRA3	P83110	453 aa		13.54	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	FSTL1	Q12841	308 aa		13.54	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	NBPF6	Q5VWK0	638 aa		13.54	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.54	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	NBPF4	Q96M43	638 aa		13.54	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	RTL1	A6NKG5	1358 aa		13.54	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	C10orf71	Q711Q0	1435 aa		13.54	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	SMIM5	Q71RC9	77 aa		13.53	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	TNS4	Q8IZW8	715 aa		13.53	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	AK7	Q96M32	723 aa		13.53	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	ITGB4	P16144	1822 aa		13.53	□□□□□ -0.24
ARHGAP17-218	ENST00000575656	BRCA1	P38398	1863 aa	Known RBP	13.53	□□□□□ -0.24

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