RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 SLC15A2Q16348 729 aa19.64■□□□□ 0.73
CDC27-217ENST00000575483 ACSBG1Q96GR2 724 aa19.64■□□□□ 0.73
CDC27-217ENST00000575483 QSER1Q2KHR3 1735 aa19.63■□□□□ 0.73
CDC27-217ENST00000575483 DOT1LQ8TEK3 1739 aa19.63■□□□□ 0.73
CDC27-217ENST00000575483 ZBTB7AO95365 584 aa19.62■□□□□ 0.73
CDC27-217ENST00000575483 FBLN1P23142 703 aa19.62■□□□□ 0.73
CDC27-217ENST00000575483 SGIP1Q9BQI5 828 aa19.62■□□□□ 0.73
CDC27-217ENST00000575483 STK32BQ9NY57 414 aa19.62■□□□□ 0.73
CDC27-217ENST00000575483 PPP1R1BQ9UD71 204 aaPredicted RBP19.62■□□□□ 0.73
CDC27-217ENST00000575483 KIF20BQ96Q89 1820 aa19.62■□□□□ 0.73
CDC27-217ENST00000575483 HOXC9P31274 260 aa19.61■□□□□ 0.73
CDC27-217ENST00000575483 LY75O60449 1722 aa19.61■□□□□ 0.73
CDC27-217ENST00000575483 COL24A1Q17RW2 1714 aa19.61■□□□□ 0.73
CDC27-217ENST00000575483 GOLGB1Q14789 3259 aaKnown RBP19.61■□□□□ 0.73
CDC27-217ENST00000575483 MEGF6O75095 1541 aa19.61■□□□□ 0.73
CDC27-217ENST00000575483 TUBGCP6Q96RT7 1819 aa19.6■□□□□ 0.73
CDC27-217ENST00000575483 USP47Q96K76 1375 aa19.6■□□□□ 0.73
CDC27-217ENST00000575483 LRRC4BQ9NT99 713 aa19.6■□□□□ 0.73
CDC27-217ENST00000575483 RTL1A6NKG5 1358 aa19.59■□□□□ 0.73
CDC27-217ENST00000575483 SLC24A1O60721 1099 aa19.59■□□□□ 0.73
CDC27-217ENST00000575483 COG3Q96JB2 828 aa19.59■□□□□ 0.73
CDC27-217ENST00000575483 NSD2O96028 1365 aa19.58■□□□□ 0.73
CDC27-217ENST00000575483 ZNF827Q17R98 1081 aa19.58■□□□□ 0.72
CDC27-217ENST00000575483 LTV1Q96GA3 475 aaPredicted RBP19.58■□□□□ 0.72
CDC27-217ENST00000575483 FYB1O15117 783 aa19.57■□□□□ 0.72
CDC27-217ENST00000575483 MTFR1LQ9H019 292 aa19.56■□□□□ 0.72
CDC27-217ENST00000575483 TRIM26Q12899 539 aaPredicted RBP19.54■□□□□ 0.72
CDC27-217ENST00000575483 DDX54Q8TDD1 881 aaKnown RBP19.54■□□□□ 0.72
CDC27-217ENST00000575483 AKT1S1Q96B36 256 aa19.54■□□□□ 0.72
CDC27-217ENST00000575483 ANKRD26Q9UPS8 1709 aa19.54■□□□□ 0.72
CDC27-217ENST00000575483 YY1P25490 414 aa19.53■□□□□ 0.72
CDC27-217ENST00000575483 AMPHP49418 695 aa19.53■□□□□ 0.72
CDC27-217ENST00000575483 TMF1P82094 1093 aa19.53■□□□□ 0.72
CDC27-217ENST00000575483 RRS1Q15050 365 aaKnown RBP19.53■□□□□ 0.72
CDC27-217ENST00000575483 GGNBP2Q9H3C7 697 aa19.53■□□□□ 0.72
CDC27-217ENST00000575483 NBPF6Q5VWK0 638 aa19.52■□□□□ 0.72
CDC27-217ENST00000575483 NBPF4Q96M43 638 aa19.52■□□□□ 0.72
CDC27-217ENST00000575483 FHDC1Q9C0D6 1143 aaPredicted RBP19.51■□□□□ 0.71
CDC27-217ENST00000575483 MAP3K5Q99683 1374 aa19.51■□□□□ 0.71
CDC27-217ENST00000575483 SLC27A3Q5K4L6 730 aa19.5■□□□□ 0.71
CDC27-217ENST00000575483 SYT17Q9BSW7 474 aa19.5■□□□□ 0.71
CDC27-217ENST00000575483 INSRP06213 1382 aa19.49■□□□□ 0.71
CDC27-217ENST00000575483 TOGARAM1Q9Y4F4 1720 aa19.49■□□□□ 0.71
CDC27-217ENST00000575483 PRIM1P49642 420 aaKnown RBP19.49■□□□□ 0.71
CDC27-217ENST00000575483 ZCRB1Q8TBF4 217 aaKnown RBP19.49■□□□□ 0.71
CDC27-217ENST00000575483 CARD14Q9BXL6 1004 aa19.49■□□□□ 0.71
CDC27-217ENST00000575483 CHD4Q14839 1912 aa19.49■□□□□ 0.71
CDC27-217ENST00000575483 PKD1L3Q7Z443 1732 aa19.48■□□□□ 0.71
CDC27-217ENST00000575483 KIF24Q5T7B8 1368 aa19.48■□□□□ 0.71
CDC27-217ENST00000575483 NCAPD2Q15021 1401 aa19.48■□□□□ 0.71
CDC27-217ENST00000575483 PNPLA7Q6ZV29 1317 aa19.48■□□□□ 0.71
CDC27-217ENST00000575483 HSP90AB2PQ58FF8 381 aa19.47■□□□□ 0.71
CDC27-217ENST00000575483 USHBP1Q8N6Y0 703 aa19.47■□□□□ 0.71
CDC27-217ENST00000575483 CGNL1Q0VF96 1302 aa19.47■□□□□ 0.71
CDC27-217ENST00000575483 TAF1LQ8IZX4 1826 aa19.46■□□□□ 0.71
CDC27-217ENST00000575483 FLT4P35916 1363 aa19.46■□□□□ 0.71
CDC27-217ENST00000575483 KCNQ4P56696 695 aa19.46■□□□□ 0.71
CDC27-217ENST00000575483 ITGB4P16144 1822 aa19.46■□□□□ 0.71
CDC27-217ENST00000575483 SMG6Q86US8 1419 aaKnown RBP19.45■□□□□ 0.7
CDC27-217ENST00000575483 NSD3Q9BZ95 1437 aa19.45■□□□□ 0.7
CDC27-217ENST00000575483 ARXQ96QS3 562 aa19.45■□□□□ 0.7
CDC27-217ENST00000575483 C5P01031 1676 aa19.45■□□□□ 0.7
CDC27-217ENST00000575483 CDCA8Q53HL2 280 aa19.44■□□□□ 0.7
CDC27-217ENST00000575483 SYTL4Q96C24 671 aaPredicted RBP19.44■□□□□ 0.7
CDC27-217ENST00000575483 MAP2P11137 1827 aaKnown RBP19.44■□□□□ 0.7
CDC27-217ENST00000575483 SLC16A10Q8TF71 515 aa19.43■□□□□ 0.7
CDC27-217ENST00000575483 TIMELESSQ9UNS1 1208 aa19.42■□□□□ 0.7
CDC27-217ENST00000575483 MKRN4PQ13434 485 aaPredicted RBP19.41■□□□□ 0.7
CDC27-217ENST00000575483 RAPGEF4Q8WZA2 1011 aa19.41■□□□□ 0.7
CDC27-217ENST00000575483 EMILIN1Q9Y6C2 1016 aa19.41■□□□□ 0.7
CDC27-217ENST00000575483 CYP27B1O15528 508 aa19.39■□□□□ 0.69
CDC27-217ENST00000575483 CCNL1Q9UK58 526 aaPredicted RBP19.39■□□□□ 0.69
CDC27-217ENST00000575483 PCDH11XQ9BZA7 1347 aa19.39■□□□□ 0.69
CDC27-217ENST00000575483 PCDH11YQ9BZA8 1340 aa19.39■□□□□ 0.69
CDC27-217ENST00000575483 TATP17735 454 aaPredicted RBP19.38■□□□□ 0.69
CDC27-217ENST00000575483 TFCP2L1Q9NZI6 479 aa19.38■□□□□ 0.69
CDC27-217ENST00000575483 CLSPNQ9HAW4 1339 aa19.37■□□□□ 0.69
CDC27-217ENST00000575483 UBR3Q6ZT12 1888 aa19.36■□□□□ 0.69
CDC27-217ENST00000575483 WASHC2AQ641Q2 1341 aa19.35■□□□□ 0.69
CDC27-217ENST00000575483 C4BP0C0L5 1744 aa19.35■□□□□ 0.69
CDC27-217ENST00000575483 ZNF784Q8NCA9 323 aaPredicted RBP19.35■□□□□ 0.69
CDC27-217ENST00000575483 PALLDQ8WX93 1383 aa19.34■□□□□ 0.69
CDC27-217ENST00000575483 COL23A1Q86Y22 540 aaPredicted RBP19.34■□□□□ 0.69
CDC27-217ENST00000575483 NKX1-1Q15270 411 aaPredicted RBP19.33■□□□□ 0.68
CDC27-217ENST00000575483 POLD1P28340 1107 aa19.32■□□□□ 0.68
CDC27-217ENST00000575483 POLKQ9UBT6 870 aa19.32■□□□□ 0.68
CDC27-217ENST00000575483 NLGN2Q8NFZ4 835 aa19.31■□□□□ 0.68
CDC27-217ENST00000575483 EYA1Q99502 592 aa19.31■□□□□ 0.68
CDC27-217ENST00000575483 MPRIPQ6WCQ1 1025 aa19.3■□□□□ 0.68
CDC27-217ENST00000575483 AMIGO3Q86WK7 504 aa19.3■□□□□ 0.68
CDC27-217ENST00000575483 PIGBQ92521 554 aa19.29■□□□□ 0.68
CDC27-217ENST00000575483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.28■□□□□ 0.687e-8■■■■■ 28.7
CDC27-217ENST00000575483 PPM1GO15355 546 aaPredicted RBP19.27■□□□□ 0.68
CDC27-217ENST00000575483 PLEKHG2Q9H7P9 1386 aa19.27■□□□□ 0.68
CDC27-217ENST00000575483 EIF4A2Q14240 407 aaKnown RBP19.25■□□□□ 0.67
CDC27-217ENST00000575483 GPR162Q16538 588 aa19.25■□□□□ 0.67
CDC27-217ENST00000575483 MSL1Q68DK7 614 aa19.25■□□□□ 0.67
CDC27-217ENST00000575483 KLHL34Q8N239 644 aa19.25■□□□□ 0.67
CDC27-217ENST00000575483 SMARCC1Q92922 1105 aaPredicted RBP19.25■□□□□ 0.67
CDC27-217ENST00000575483 SPG7Q9UQ90 795 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms