RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 KIF7Q2M1P5 1343 aa16.47■□□□□ 0.23
USP43-206ENST00000575346 ZCRB1Q8TBF4 217 aaKnown RBP16.47■□□□□ 0.23
USP43-206ENST00000575346 DDX54Q8TDD1 881 aaKnown RBP16.45■□□□□ 0.22
USP43-206ENST00000575346 RAPGEF4Q8WZA2 1011 aa16.45■□□□□ 0.22
USP43-206ENST00000575346 ACSBG1Q96GR2 724 aa16.45■□□□□ 0.22
USP43-206ENST00000575346 BTAF1O14981 1849 aa16.45■□□□□ 0.22
USP43-206ENST00000575346 TXNRD1Q16881 649 aa16.44■□□□□ 0.22
USP43-206ENST00000575346 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
USP43-206ENST00000575346 TATP17735 454 aaPredicted RBP16.43■□□□□ 0.22
USP43-206ENST00000575346 PPM1GO15355 546 aaPredicted RBP16.42■□□□□ 0.22
USP43-206ENST00000575346 KNSTRNQ9Y448 316 aa16.42■□□□□ 0.22
USP43-206ENST00000575346 PKD1L3Q7Z443 1732 aa16.42■□□□□ 0.22
USP43-206ENST00000575346 DOT1LQ8TEK3 1739 aa16.42■□□□□ 0.22
USP43-206ENST00000575346 PLEKHG2Q9H7P9 1386 aa16.41■□□□□ 0.22
USP43-206ENST00000575346 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
USP43-206ENST00000575346 EYA1Q99502 592 aa16.41■□□□□ 0.22
USP43-206ENST00000575346 ANO8Q9HCE9 1232 aaPredicted RBP16.41■□□□□ 0.22
USP43-206ENST00000575346 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
USP43-206ENST00000575346 PCDH11XQ9BZA7 1347 aa16.4■□□□□ 0.22
USP43-206ENST00000575346 PCDH11YQ9BZA8 1340 aa16.4■□□□□ 0.22
USP43-206ENST00000575346 PAPPAQ13219 1627 aa16.39■□□□□ 0.21
USP43-206ENST00000575346 TNNT2P45379 298 aaPredicted RBP16.39■□□□□ 0.21
USP43-206ENST00000575346 EIF4A2Q14240 407 aaKnown RBP16.39■□□□□ 0.21
USP43-206ENST00000575346 MORC1Q86VD1 984 aa16.39■□□□□ 0.21
USP43-206ENST00000575346 KAT6BQ8WYB5 2073 aa16.39■□□□□ 0.21
USP43-206ENST00000575346 PRIM1P49642 420 aaKnown RBP16.38■□□□□ 0.21
USP43-206ENST00000575346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.38■□□□□ 0.21
USP43-206ENST00000575346 CASZ1Q86V15 1759 aa16.38■□□□□ 0.21
USP43-206ENST00000575346 LY75O60449 1722 aa16.37■□□□□ 0.21
USP43-206ENST00000575346 CYP27B1O15528 508 aa16.37■□□□□ 0.21
USP43-206ENST00000575346 IGSF1Q8N6C5 1336 aa16.37■□□□□ 0.21
USP43-206ENST00000575346 NKX1-1Q15270 411 aaPredicted RBP16.36■□□□□ 0.21
USP43-206ENST00000575346 SLC15A2Q16348 729 aa16.36■□□□□ 0.21
USP43-206ENST00000575346 SLC27A3Q5K4L6 730 aa16.36■□□□□ 0.21
USP43-206ENST00000575346 STK32BQ9NY57 414 aa16.36■□□□□ 0.21
USP43-206ENST00000575346 NPC1L1Q9UHC9 1359 aa16.36■□□□□ 0.21
USP43-206ENST00000575346 SYTL4Q96C24 671 aaPredicted RBP16.35■□□□□ 0.21
USP43-206ENST00000575346 SPG7Q9UQ90 795 aa16.35■□□□□ 0.21
USP43-206ENST00000575346 LRRC4BQ9NT99 713 aa16.34■□□□□ 0.21
USP43-206ENST00000575346 SPON1Q9HCB6 807 aa16.33■□□□□ 0.2
USP43-206ENST00000575346 TOGARAM1Q9Y4F4 1720 aa16.33■□□□□ 0.2
USP43-206ENST00000575346 QSER1Q2KHR3 1735 aa16.31■□□□□ 0.2
USP43-206ENST00000575346 ITGB4P16144 1822 aa16.31■□□□□ 0.2
USP43-206ENST00000575346 IL13P35225 146 aa16.3■□□□□ 0.2
USP43-206ENST00000575346 IFNL2Q8IZJ0 200 aa16.3■□□□□ 0.2
USP43-206ENST00000575346 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
USP43-206ENST00000575346 PDGFDQ9GZP0 370 aaPredicted RBP16.3■□□□□ 0.2
USP43-206ENST00000575346 PPP1R1BQ9UD71 204 aaPredicted RBP16.3■□□□□ 0.2
USP43-206ENST00000575346 KDRP35968 1356 aa16.29■□□□□ 0.2
USP43-206ENST00000575346 PHKG2P15735 406 aa16.29■□□□□ 0.2
USP43-206ENST00000575346 ZNF827Q17R98 1081 aa16.29■□□□□ 0.2
USP43-206ENST00000575346 YY1P25490 414 aa16.28■□□□□ 0.2
USP43-206ENST00000575346 HMGB2P26583 209 aaKnown RBP16.28■□□□□ 0.2
USP43-206ENST00000575346 MTHFSP49914 203 aa16.28■□□□□ 0.2
USP43-206ENST00000575346 AMOTQ4VCS5 1084 aa16.27■□□□□ 0.2
USP43-206ENST00000575346 CC2D1BQ5T0F9 858 aaKnown RBP16.27■□□□□ 0.2
USP43-206ENST00000575346 MPRIPQ6WCQ1 1025 aa16.27■□□□□ 0.2
USP43-206ENST00000575346 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
USP43-206ENST00000575346 SMARCC1Q92922 1105 aaPredicted RBP16.26■□□□□ 0.19
USP43-206ENST00000575346 MTFR1LQ9H019 292 aa16.26■□□□□ 0.19
USP43-206ENST00000575346 CCNL1Q9UK58 526 aaPredicted RBP16.26■□□□□ 0.19
USP43-206ENST00000575346 PALLDQ8WX93 1383 aa16.26■□□□□ 0.19
USP43-206ENST00000575346 PTGER2P43116 358 aa16.25■□□□□ 0.19
USP43-206ENST00000575346 AEBP1Q8IUX7 1158 aa16.25■□□□□ 0.19
USP43-206ENST00000575346 PIGBQ92521 554 aa16.25■□□□□ 0.19
USP43-206ENST00000575346 ZBTB7AO95365 584 aa16.24■□□□□ 0.19
USP43-206ENST00000575346 HSP90AB1P08238 724 aaKnown RBP16.24■□□□□ 0.19
USP43-206ENST00000575346 KCNQ4P56696 695 aa16.24■□□□□ 0.19
USP43-206ENST00000575346 SULT6B1Q6IMI4 303 aa16.24■□□□□ 0.19
USP43-206ENST00000575346 SLC16A10Q8TF71 515 aa16.24■□□□□ 0.19
USP43-206ENST00000575346 SGIP1Q9BQI5 828 aa16.24■□□□□ 0.19
USP43-206ENST00000575346 C5P01031 1676 aa16.24■□□□□ 0.19
USP43-206ENST00000575346 TAF1LQ8IZX4 1826 aa16.24■□□□□ 0.19
USP43-206ENST00000575346 TUBGCP6Q96RT7 1819 aa16.24■□□□□ 0.19
USP43-206ENST00000575346 COL24A1Q17RW2 1714 aa16.23■□□□□ 0.19
USP43-206ENST00000575346 DCAF8L1A6NGE4 600 aa16.23■□□□□ 0.19
USP43-206ENST00000575346 DCAF5Q96JK2 942 aa16.23■□□□□ 0.19
USP43-206ENST00000575346 PNPLA7Q6ZV29 1317 aa16.22■□□□□ 0.19
USP43-206ENST00000575346 ERVV-2B6SEH9 535 aa16.22■□□□□ 0.19
USP43-206ENST00000575346 TMOD3Q9NYL9 352 aa16.22■□□□□ 0.19
USP43-206ENST00000575346 COL3A1P02461 1466 aaPredicted RBP16.22■□□□□ 0.19
USP43-206ENST00000575346 DIAPH1O60610 1272 aaKnown RBP16.21■□□□□ 0.19
USP43-206ENST00000575346 TFCP2L1Q9NZI6 479 aa16.21■□□□□ 0.19
USP43-206ENST00000575346 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.19
USP43-206ENST00000575346 KDM6AO15550 1401 aaPredicted RBP16.2■□□□□ 0.18
USP43-206ENST00000575346 ZNF530Q6P9A1 599 aaPredicted RBP16.2■□□□□ 0.18
USP43-206ENST00000575346 ZNF831Q5JPB2 1677 aa16.19■□□□□ 0.18
USP43-206ENST00000575346 C4BP0C0L5 1744 aa16.19■□□□□ 0.18
USP43-206ENST00000575346 LOC102724428A0A0B4J2F2 783 aa16.18■□□□□ 0.18
USP43-206ENST00000575346 SIK1P57059 783 aa16.18■□□□□ 0.18
USP43-206ENST00000575346 ATG3Q9NT62 314 aa16.18■□□□□ 0.18
USP43-206ENST00000575346 ASAP1Q9ULH1 1129 aa16.18■□□□□ 0.18
USP43-206ENST00000575346 C1orf141Q5JVX7 400 aa16.17■□□□□ 0.18
USP43-206ENST00000575346 SCN11AQ9UI33 1791 aa16.16■□□□□ 0.18
USP43-206ENST00000575346 AKAP4Q5JQC9 854 aa16.16■□□□□ 0.18
USP43-206ENST00000575346 COL23A1Q86Y22 540 aaPredicted RBP16.16■□□□□ 0.18
USP43-206ENST00000575346 FLAD1Q8NFF5 587 aa16.16■□□□□ 0.18
USP43-206ENST00000575346 MAP3K5Q99683 1374 aa16.15■□□□□ 0.18
USP43-206ENST00000575346 HMOX1P09601 288 aa16.15■□□□□ 0.18
USP43-206ENST00000575346 ADAMTS7Q9UKP4 1686 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms