RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171	PRIM1	P49642	420 aa	Known RBP	13.74	□□□□□ -0.21
NXN-208	ENST00000575171	TRPM1	Q7Z4N2	1603 aa		13.74	□□□□□ -0.21
NXN-208	ENST00000575171	DLC1	Q96QB1	1528 aa		13.74	□□□□□ -0.21
NXN-208	ENST00000575171	KNDC1	Q76NI1	1749 aa		13.73	□□□□□ -0.21
NXN-208	ENST00000575171	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.73	□□□□□ -0.21
NXN-208	ENST00000575171	PTPRE	P23469	700 aa		13.73	□□□□□ -0.21
NXN-208	ENST00000575171	PBX2	P40425	430 aa		13.73	□□□□□ -0.21
NXN-208	ENST00000575171	QTRT2	Q9H974	415 aa	Known RBP	13.73	□□□□□ -0.21
NXN-208	ENST00000575171	ATRN	O75882	1429 aa		13.73	□□□□□ -0.21
NXN-208	ENST00000575171	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.72	□□□□□ -0.21
NXN-208	ENST00000575171	C6orf132	Q5T0Z8	1188 aa		13.72	□□□□□ -0.21
NXN-208	ENST00000575171	C8orf37	Q96NL8	207 aa		13.72	□□□□□ -0.21
NXN-208	ENST00000575171	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.72	□□□□□ -0.21
NXN-208	ENST00000575171	GPRASP1	Q5JY77	1395 aa		13.71	□□□□□ -0.21
NXN-208	ENST00000575171	ATAD2	Q6PL18	1390 aa		13.71	□□□□□ -0.21
NXN-208	ENST00000575171	SOS2	Q07890	1332 aa	Predicted RBP	13.71	□□□□□ -0.21
NXN-208	ENST00000575171	ARHGAP33	O14559	1287 aa		13.71	□□□□□ -0.21
NXN-208	ENST00000575171	RBM26	Q5T8P6	1007 aa	Known RBP	13.71	□□□□□ -0.21
NXN-208	ENST00000575171	EIF3A	Q14152	1382 aa	Known RBP	13.71	□□□□□ -0.22
NXN-208	ENST00000575171	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.7	□□□□□ -0.22
NXN-208	ENST00000575171	NUTM2F	A1L443	756 aa		13.7	□□□□□ -0.22
NXN-208	ENST00000575171	TSR1	Q2NL82	804 aa	Known RBP	13.7	□□□□□ -0.22
NXN-208	ENST00000575171	KCNK17	Q96T54	332 aa		13.7	□□□□□ -0.22
NXN-208	ENST00000575171	BRWD3	Q6RI45	1802 aa		13.69	□□□□□ -0.22
NXN-208	ENST00000575171	POTEE	Q6S8J3	1075 aa		13.69	□□□□□ -0.22
NXN-208	ENST00000575171	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
NXN-208	ENST00000575171	CDC42BPG	Q6DT37	1551 aa		13.69	□□□□□ -0.22
NXN-208	ENST00000575171	PXDN	Q92626	1479 aa		13.68	□□□□□ -0.22
NXN-208	ENST00000575171	CDAN1	Q8IWY9	1227 aa		13.68	□□□□□ -0.22
NXN-208	ENST00000575171	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.68	□□□□□ -0.22
NXN-208	ENST00000575171	AXIN2	Q9Y2T1	843 aa		13.68	□□□□□ -0.22
NXN-208	ENST00000575171	BCL9L	Q86UU0	1499 aa		13.67	□□□□□ -0.22
NXN-208	ENST00000575171	LMOD2	Q6P5Q4	547 aa		13.67	□□□□□ -0.22
NXN-208	ENST00000575171	GLI3	P10071	1580 aa		13.66	□□□□□ -0.22
NXN-208	ENST00000575171	ADAMTS2	O95450	1211 aa		13.66	□□□□□ -0.22
NXN-208	ENST00000575171	PSEN2	P49810	448 aa		13.66	□□□□□ -0.22
NXN-208	ENST00000575171	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.66	□□□□□ -0.22
NXN-208	ENST00000575171	PPP1R3G	B7ZBB8	358 aa		13.65	□□□□□ -0.22
NXN-208	ENST00000575171	WASL	O00401	505 aa	Predicted RBP	13.65	□□□□□ -0.22
NXN-208	ENST00000575171	NGLY1	Q96IV0	654 aa		13.65	□□□□□ -0.22
NXN-208	ENST00000575171	CDHR5	Q9HBB8	845 aa		13.65	□□□□□ -0.22
NXN-208	ENST00000575171	USP47	Q96K76	1375 aa		13.65	□□□□□ -0.22
NXN-208	ENST00000575171	ESCO1	Q5FWF5	840 aa		13.64	□□□□□ -0.23
NXN-208	ENST00000575171	ORAI2	Q96SN7	254 aa		13.64	□□□□□ -0.23
NXN-208	ENST00000575171	USP21	Q9UK80	565 aa		13.64	□□□□□ -0.23
NXN-208	ENST00000575171	TRPC5	Q9UL62	973 aa	Predicted RBP	13.64	□□□□□ -0.23
NXN-208	ENST00000575171	LRP5	O75197	1615 aa		13.64	□□□□□ -0.23
NXN-208	ENST00000575171	GPIHBP1	Q8IV16	184 aa		13.63	□□□□□ -0.23
NXN-208	ENST00000575171	CDK19	Q9BWU1	502 aa		13.63	□□□□□ -0.23
NXN-208	ENST00000575171	ADGRB2	O60241	1585 aa		13.62	□□□□□ -0.23
NXN-208	ENST00000575171	ABCA3	Q99758	1704 aa		13.62	□□□□□ -0.23
NXN-208	ENST00000575171	FMN2	Q9NZ56	1722 aa		13.62	□□□□□ -0.23
NXN-208	ENST00000575171	ST20-MTHFS	A0A0A6YYL1	179 aa		13.62	□□□□□ -0.23
NXN-208	ENST00000575171	SRPK2	P78362	688 aa	Known RBP	13.62	□□□□□ -0.23
NXN-208	ENST00000575171	COL9A1	P20849	921 aa		13.61	□□□□□ -0.23
NXN-208	ENST00000575171	PCDH10	Q9P2E7	1040 aa		13.61	□□□□□ -0.23
NXN-208	ENST00000575171	EVC2	Q86UK5	1308 aa		13.61	□□□□□ -0.23
NXN-208	ENST00000575171	USP32	Q8NFA0	1604 aa		13.61	□□□□□ -0.23
NXN-208	ENST00000575171	SLIT2	O94813	1529 aa		13.6	□□□□□ -0.23
NXN-208	ENST00000575171	PLCH1	Q4KWH8	1693 aa		13.6	□□□□□ -0.23
NXN-208	ENST00000575171	DMRTA1	Q5VZB9	504 aa		13.6	□□□□□ -0.23
NXN-208	ENST00000575171	KRTAP3-3	Q9BYR6	98 aa		13.6	□□□□□ -0.23
NXN-208	ENST00000575171	KRTAP3-2	Q9BYR7	98 aa		13.6	□□□□□ -0.23
NXN-208	ENST00000575171	PRR36	Q9H6K5	1346 aa		13.6	□□□□□ -0.23
NXN-208	ENST00000575171	QRICH2	Q9H0J4	1663 aa		13.59	□□□□□ -0.23
NXN-208	ENST00000575171	ANKAR	Q7Z5J8	1434 aa		13.59	□□□□□ -0.23
NXN-208	ENST00000575171	RGPD8	O14715	1765 aa	Predicted RBP	13.59	□□□□□ -0.23
NXN-208	ENST00000575171	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
NXN-208	ENST00000575171	LSM11	P83369	360 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
NXN-208	ENST00000575171	PTGDR	Q13258	359 aa		13.59	□□□□□ -0.23
NXN-208	ENST00000575171	NUDT16	Q96DE0	195 aa	Known RBP	13.59	□□□□□ -0.23
NXN-208	ENST00000575171	KIF1A	Q12756	1690 aa		13.59	□□□□□ -0.23
NXN-208	ENST00000575171	TULP4	Q9NRJ4	1543 aa		13.59	□□□□□ -0.23
NXN-208	ENST00000575171	NWD2	Q9ULI1	1742 aa		13.59	□□□□□ -0.23
NXN-208	ENST00000575171	FCHSD2	O94868	740 aa		13.58	□□□□□ -0.24
NXN-208	ENST00000575171	PMFBP1	Q8TBY8	1022 aa		13.58	□□□□□ -0.24
NXN-208	ENST00000575171	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.58	□□□□□ -0.24
NXN-208	ENST00000575171	HSPA5	P11021	654 aa	Known RBP	13.57	□□□□□ -0.24
NXN-208	ENST00000575171	CCDC125	Q86Z20	511 aa		13.57	□□□□□ -0.24
NXN-208	ENST00000575171	SBNO2	Q9Y2G9	1366 aa		13.57	□□□□□ -0.24
NXN-208	ENST00000575171	TESK2	Q96S53	571 aa		13.56	□□□□□ -0.24
NXN-208	ENST00000575171	ZBED2	Q9BTP6	218 aa		13.56	□□□□□ -0.24
NXN-208	ENST00000575171	NPHP3	Q7Z494	1330 aa		13.56	□□□□□ -0.24
NXN-208	ENST00000575171	BLM	P54132	1417 aa	Predicted RBP	13.56	□□□□□ -0.24
NXN-208	ENST00000575171	ATP7B	P35670	1465 aa		13.55	□□□□□ -0.24
NXN-208	ENST00000575171	FOXO3	O43524	673 aa		13.55	□□□□□ -0.24
NXN-208	ENST00000575171	TMF1	P82094	1093 aa		13.55	□□□□□ -0.24
NXN-208	ENST00000575171	XPC	Q01831	940 aa	Predicted RBP	13.55	□□□□□ -0.24
NXN-208	ENST00000575171	NGDN	Q8NEJ9	315 aa	Known RBP	13.55	□□□□□ -0.24
NXN-208	ENST00000575171	SLC4A5	Q9BY07	1137 aa		13.55	□□□□□ -0.24
NXN-208	ENST00000575171	NRAP	Q86VF7	1730 aa		13.55	□□□□□ -0.24
NXN-208	ENST00000575171	ZEB1	P37275	1124 aa	Predicted RBP	13.54	□□□□□ -0.24
NXN-208	ENST00000575171	ANKRD13D	Q6ZTN6	518 aa		13.54	□□□□□ -0.24
NXN-208	ENST00000575171	GJD4	Q96KN9	370 aa	Predicted RBP	13.54	□□□□□ -0.24
NXN-208	ENST00000575171	TK2	O00142	265 aa		13.53	□□□□□ -0.24
NXN-208	ENST00000575171	GPR37	O15354	613 aa		13.53	□□□□□ -0.24
NXN-208	ENST00000575171	PRSS12	P56730	875 aa		13.53	□□□□□ -0.24
NXN-208	ENST00000575171	HIC1	Q14526	733 aa		13.53	□□□□□ -0.24
NXN-208	ENST00000575171	CDCA7L	Q96GN5	454 aa		13.53	□□□□□ -0.24
NXN-208	ENST00000575171	POLR3GL	Q9BT43	218 aa		13.53	□□□□□ -0.24

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